RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 ACTL10Q5JWF8 245 aa9.91□□□□□ -0.82
CCHCR1-227ENST00000508852 SLC35E1Q96K37 410 aa9.91□□□□□ -0.82
CCHCR1-227ENST00000508852 RAB40CQ96S21 281 aa9.91□□□□□ -0.82
CCHCR1-227ENST00000508852 TBC1D24Q9ULP9 559 aa9.91□□□□□ -0.82
CCHCR1-227ENST00000508852 FAM90A26D6RGX4 464 aa9.9□□□□□ -0.82
CCHCR1-227ENST00000508852 BUB3O43684 328 aa9.9□□□□□ -0.82
CCHCR1-227ENST00000508852 MED6O75586 246 aa9.9□□□□□ -0.82
CCHCR1-227ENST00000508852 SLC25A6P12236 298 aa9.9□□□□□ -0.82
CCHCR1-227ENST00000508852 ID1P41134 155 aa9.9□□□□□ -0.82
CCHCR1-227ENST00000508852 TMEM128Q5BJH2 165 aa9.9□□□□□ -0.82
CCHCR1-227ENST00000508852 PSMG4Q5JS54 123 aa9.9□□□□□ -0.82
CCHCR1-227ENST00000508852 C1orf194Q5T5A4 169 aa9.9□□□□□ -0.82
CCHCR1-227ENST00000508852 Q8NAQ8 132 aa9.9□□□□□ -0.82
CCHCR1-227ENST00000508852 OR1S1Q8NH92 325 aa9.9□□□□□ -0.82
CCHCR1-227ENST00000508852 RNF125Q96EQ8 232 aa9.9□□□□□ -0.82
CCHCR1-227ENST00000508852 SLC25A21Q9BQT8 299 aaPredicted RBP9.9□□□□□ -0.82
CCHCR1-227ENST00000508852 ZFP92A6NM28 416 aa9.89□□□□□ -0.83
CCHCR1-227ENST00000508852 PSG1P11464 419 aa9.89□□□□□ -0.83
CCHCR1-227ENST00000508852 TNFSF8P32971 234 aa9.89□□□□□ -0.83
CCHCR1-227ENST00000508852 NKX2-1P43699 371 aaPredicted RBP9.89□□□□□ -0.83
CCHCR1-227ENST00000508852 USF2Q15853 346 aaPredicted RBP9.89□□□□□ -0.83
CCHCR1-227ENST00000508852 SPATA31B1PQ5VZV4 182 aa9.89□□□□□ -0.83
CCHCR1-227ENST00000508852 MCFD2Q8NI22 146 aa9.89□□□□□ -0.83
CCHCR1-227ENST00000508852 CIB3Q96Q77 187 aaPredicted RBP9.89□□□□□ -0.83
CCHCR1-227ENST00000508852 SOSTQ9BQB4 213 aa9.89□□□□□ -0.83
CCHCR1-227ENST00000508852 SLIRPQ9GZT3 109 aaKnown RBP9.89□□□□□ -0.83
CCHCR1-227ENST00000508852 RBKSQ9H477 322 aa9.89□□□□□ -0.83
CCHCR1-227ENST00000508852 AGRNO00468 2067 aa9.89□□□□□ -0.83
CCHCR1-227ENST00000508852 TRAV10A0A0B4J240 114 aa9.88□□□□□ -0.83
CCHCR1-227ENST00000508852 IGHV4-28A0A0C4DH34 117 aa9.88□□□□□ -0.83
CCHCR1-227ENST00000508852 KNCNA6PVL3 124 aa9.88□□□□□ -0.83
CCHCR1-227ENST00000508852 SNRPGP15A8MWD9 76 aa9.88□□□□□ -0.83
CCHCR1-227ENST00000508852 GIG44P09565 113 aaPredicted RBP9.88□□□□□ -0.83
CCHCR1-227ENST00000508852 S100A5P33763 92 aa9.88□□□□□ -0.83
CCHCR1-227ENST00000508852 LYZL2Q7Z4W2 148 aa9.88□□□□□ -0.83
CCHCR1-227ENST00000508852 TOMM5Q8N4H5 51 aa9.88□□□□□ -0.83
CCHCR1-227ENST00000508852 LRTM2Q8N967 370 aa9.88□□□□□ -0.83
CCHCR1-227ENST00000508852 TMEM170AQ8WVE7 144 aa9.88□□□□□ -0.83
CCHCR1-227ENST00000508852 TMEM189A5PLL7 270 aa9.87□□□□□ -0.83
CCHCR1-227ENST00000508852 SMIM9A6NGZ8 99 aa9.87□□□□□ -0.83
CCHCR1-227ENST00000508852 IGLL5B9A064 214 aa9.87□□□□□ -0.83
CCHCR1-227ENST00000508852 H3BMQ9 156 aa9.87□□□□□ -0.83
CCHCR1-227ENST00000508852 HLA-DRB4P13762 266 aa9.87□□□□□ -0.83
CCHCR1-227ENST00000508852 SUPT4H1P63272 117 aaKnown RBP9.87□□□□□ -0.83
CCHCR1-227ENST00000508852 GGNBP1Q5YKI7 109 aa9.87□□□□□ -0.83
CCHCR1-227ENST00000508852 CSNK1G2-AS1Q8NCQ2 148 aa9.87□□□□□ -0.83
CCHCR1-227ENST00000508852 CLUHP3Q96NS8 147 aa9.87□□□□□ -0.83
CCHCR1-227ENST00000508852 TMED3Q9Y3Q3 217 aa9.87□□□□□ -0.83
CCHCR1-227ENST00000508852 HLA-DRB4X5D2U9 266 aa9.87□□□□□ -0.83
CCHCR1-227ENST00000508852 KMT2AQ03164 3969 aa9.87□□□□□ -0.83
CCHCR1-227ENST00000508852 TEX48A0A1B0GUV7 120 aa9.86□□□□□ -0.83
CCHCR1-227ENST00000508852 H3BMM0 161 aa9.86□□□□□ -0.83
CCHCR1-227ENST00000508852 DEFB4AO15263 64 aa9.86□□□□□ -0.83
CCHCR1-227ENST00000508852 NXPH3O95157 252 aa9.86□□□□□ -0.83
CCHCR1-227ENST00000508852 RBMY1A1P0DJD3 496 aaKnown RBP9.86□□□□□ -0.83
CCHCR1-227ENST00000508852 RBMY1CP0DJD4 496 aa9.86□□□□□ -0.83
CCHCR1-227ENST00000508852 C4BPBP20851 252 aa9.86□□□□□ -0.83
CCHCR1-227ENST00000508852 PSMB3P49720 205 aa9.86□□□□□ -0.83
CCHCR1-227ENST00000508852 MEOX2P50222 304 aa9.86□□□□□ -0.83
CCHCR1-227ENST00000508852 UBE2MP61081 183 aaKnown RBP9.86□□□□□ -0.83
CCHCR1-227ENST00000508852 GAMTQ14353 236 aa9.86□□□□□ -0.83
CCHCR1-227ENST00000508852 RBMY1FQ15415 496 aaKnown RBP9.86□□□□□ -0.83
CCHCR1-227ENST00000508852 PYDC2Q56P42 97 aa9.86□□□□□ -0.83
CCHCR1-227ENST00000508852 NEU1Q99519 415 aa9.86□□□□□ -0.83
CCHCR1-227ENST00000508852 TRGV9Q99603 122 aa9.86□□□□□ -0.83
CCHCR1-227ENST00000508852 PBDC1Q9BVG4 233 aa9.86□□□□□ -0.83
CCHCR1-227ENST00000508852 SLC45A2Q9UMX9 530 aa9.86□□□□□ -0.83
CCHCR1-227ENST00000508852 PITX3O75364 302 aa9.85□□□□□ -0.83
CCHCR1-227ENST00000508852 HLA-DMBP28068 263 aa9.85□□□□□ -0.83
CCHCR1-227ENST00000508852 FOXI2Q6ZQN5 318 aa9.85□□□□□ -0.83
CCHCR1-227ENST00000508852 TMED4Q7Z7H5 227 aa9.85□□□□□ -0.83
CCHCR1-227ENST00000508852 PPP1R14BQ96C90 147 aa9.85□□□□□ -0.83
CCHCR1-227ENST00000508852 RNF126Q9BV68 326 aa9.85□□□□□ -0.83
CCHCR1-227ENST00000508852 X6R8D5 127 aa9.85□□□□□ -0.83
CCHCR1-227ENST00000508852 ISLRO14498 428 aa9.84□□□□□ -0.83
CCHCR1-227ENST00000508852 VAMP1P23763 118 aa9.84□□□□□ -0.83
CCHCR1-227ENST00000508852 S100A7AQ86SG5 101 aa9.84□□□□□ -0.83
CCHCR1-227ENST00000508852 OR8I2Q8N0Y5 310 aa9.84□□□□□ -0.83
CCHCR1-227ENST00000508852 RPP25LQ8N5L8 163 aaKnown RBP9.84□□□□□ -0.83
CCHCR1-227ENST00000508852 COQ8AQ8NI60 647 aa9.84□□□□□ -0.83
CCHCR1-227ENST00000508852 PRR13Q9NZ81 148 aa9.84□□□□□ -0.83
CCHCR1-227ENST00000508852 APLNQ9ULZ1 77 aa9.84□□□□□ -0.83
CCHCR1-227ENST00000508852 GALR1P47211 349 aa9.83□□□□□ -0.84
CCHCR1-227ENST00000508852 LYZP61626 148 aa9.83□□□□□ -0.84
CCHCR1-227ENST00000508852 EBLN2Q6P2I7 272 aa9.83□□□□□ -0.84
CCHCR1-227ENST00000508852 THAP8Q8NA92 274 aa9.83□□□□□ -0.84
CCHCR1-227ENST00000508852 TRIM63Q969Q1 353 aa9.83□□□□□ -0.84
CCHCR1-227ENST00000508852 GPR82Q96P67 336 aa9.83□□□□□ -0.84
CCHCR1-227ENST00000508852 SAV1Q9H4B6 383 aaPredicted RBP9.83□□□□□ -0.84
CCHCR1-227ENST00000508852 CLEC5AQ9NY25 188 aa9.83□□□□□ -0.84
CCHCR1-227ENST00000508852 XCL2Q9UBD3 114 aa9.83□□□□□ -0.84
CCHCR1-227ENST00000508852 IGKV1D-37A0A075B6S9 117 aa9.82□□□□□ -0.84
CCHCR1-227ENST00000508852 ELOA3CA0A087WX78 387 aaPredicted RBP9.82□□□□□ -0.84
CCHCR1-227ENST00000508852 SYNGR2O43760 224 aa9.82□□□□□ -0.84
CCHCR1-227ENST00000508852 SFT2D2O95562 160 aa9.82□□□□□ -0.84
CCHCR1-227ENST00000508852 SPART-AS1P0CW21 52 aa9.82□□□□□ -0.84
CCHCR1-227ENST00000508852 ZNF90Q03938 601 aa9.82□□□□□ -0.84
CCHCR1-227ENST00000508852 SPANXN2Q5MJ10 180 aa9.82□□□□□ -0.84
CCHCR1-227ENST00000508852 Q6ZTC4 211 aa9.82□□□□□ -0.84
CCHCR1-227ENST00000508852 BPIFCQ8NFQ6 507 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms