RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 ARL16Q0P5N6 197 aa13.62□□□□□ -0.23
PDLIM7-216ENST00000506537 TCF24Q7RTU0 167 aa13.62□□□□□ -0.23
PDLIM7-216ENST00000506537 TRGV9Q99603 122 aa13.62□□□□□ -0.23
PDLIM7-216ENST00000506537 OR11H12B2RN74 326 aa13.61□□□□□ -0.23
PDLIM7-216ENST00000506537 DFFBO76075 338 aa13.61□□□□□ -0.23
PDLIM7-216ENST00000506537 PTTG1O95997 202 aa13.61□□□□□ -0.23
PDLIM7-216ENST00000506537 RAB32Q13637 225 aa13.61□□□□□ -0.23
PDLIM7-216ENST00000506537 OR51G1Q8NGK1 321 aa13.61□□□□□ -0.23
PDLIM7-216ENST00000506537 TENM3Q9P273 2699 aa13.6□□□□□ -0.23
PDLIM7-216ENST00000506537 IGKV3-7A0A075B6H7 116 aa13.6□□□□□ -0.23
PDLIM7-216ENST00000506537 HNRNPCP07910 306 aaKnown RBP eCLIP13.6□□□□□ -0.23
PDLIM7-216ENST00000506537 BMI1P35226 326 aa13.6□□□□□ -0.23
PDLIM7-216ENST00000506537 P2RY1P47900 373 aa13.6□□□□□ -0.23
PDLIM7-216ENST00000506537 S100A10P60903 97 aa13.6□□□□□ -0.23
PDLIM7-216ENST00000506537 AKR1C1Q04828 323 aa13.6□□□□□ -0.23
PDLIM7-216ENST00000506537 OR2F1Q13607 317 aa13.6□□□□□ -0.23
PDLIM7-216ENST00000506537 ODF3L2Q3SX64 289 aa13.6□□□□□ -0.23
PDLIM7-216ENST00000506537 RNF125Q96EQ8 232 aa13.6□□□□□ -0.23
PDLIM7-216ENST00000506537 SRD5A3Q9H8P0 318 aa13.6□□□□□ -0.23
PDLIM7-216ENST00000506537 A0A1W2PS18 150 aa13.59□□□□□ -0.23
PDLIM7-216ENST00000506537 OR4C46A6NHA9 309 aa13.59□□□□□ -0.23
PDLIM7-216ENST00000506537 L7N2F9 121 aa13.59□□□□□ -0.23
PDLIM7-216ENST00000506537 TFPI2P48307 235 aa13.59□□□□□ -0.23
PDLIM7-216ENST00000506537 RRAS2P62070 204 aaPredicted RBP13.59□□□□□ -0.23
PDLIM7-216ENST00000506537 VAMP2P63027 116 aa13.59□□□□□ -0.23
PDLIM7-216ENST00000506537 DLK1P80370 383 aa13.59□□□□□ -0.23
PDLIM7-216ENST00000506537 LINC00322Q6ZN03 302 aaPredicted RBP13.59□□□□□ -0.23
PDLIM7-216ENST00000506537 TMEM144Q7Z5S9 345 aa13.59□□□□□ -0.23
PDLIM7-216ENST00000506537 GBGT1Q8N5D6 347 aa13.59□□□□□ -0.23
PDLIM7-216ENST00000506537 CITED4Q96RK1 184 aa13.59□□□□□ -0.23
PDLIM7-216ENST00000506537 TMEM231Q9H6L2 316 aa13.59□□□□□ -0.23
PDLIM7-216ENST00000506537 TUBA4BQ9H853 241 aa13.59□□□□□ -0.23
PDLIM7-216ENST00000506537 UBQLN2Q9UHD9 624 aa13.59□□□□□ -0.23
PDLIM7-216ENST00000506537 SMCO3A2RU48 225 aa13.58□□□□□ -0.24
PDLIM7-216ENST00000506537 RBMY1BA6NDE4 496 aaKnown RBP13.58□□□□□ -0.24
PDLIM7-216ENST00000506537 RBMY1EA6NEQ0 496 aaKnown RBP13.58□□□□□ -0.24
PDLIM7-216ENST00000506537 RBMY1DP0C7P1 496 aaKnown RBP13.58□□□□□ -0.24
PDLIM7-216ENST00000506537 NHLRC4P0CG21 123 aaPredicted RBP13.58□□□□□ -0.24
PDLIM7-216ENST00000506537 H2BFSP57053 126 aa13.58□□□□□ -0.24
PDLIM7-216ENST00000506537 TMEM182Q6ZP80 229 aaPredicted RBP13.58□□□□□ -0.24
PDLIM7-216ENST00000506537 STPG3Q8N7X2 389 aa13.58□□□□□ -0.24
PDLIM7-216ENST00000506537 GLMPQ8WWB7 406 aa13.58□□□□□ -0.24
PDLIM7-216ENST00000506537 PBDC1Q9BVG4 233 aa13.58□□□□□ -0.24
PDLIM7-216ENST00000506537 MS4A6AQ9H2W1 248 aa13.58□□□□□ -0.24
PDLIM7-216ENST00000506537 RABAC1Q9UI14 185 aa13.58□□□□□ -0.24
PDLIM7-216ENST00000506537 STAB2Q8WWQ8 2551 aa13.57□□□□□ -0.24
PDLIM7-216ENST00000506537 FAM24AA6NFZ4 105 aa13.57□□□□□ -0.24
PDLIM7-216ENST00000506537 SSNA1O43805 119 aa13.57□□□□□ -0.24
PDLIM7-216ENST00000506537 CD5P06127 495 aa13.57□□□□□ -0.24
PDLIM7-216ENST00000506537 FABP1P07148 127 aa13.57□□□□□ -0.24
PDLIM7-216ENST00000506537 GATA2P23769 480 aaPredicted RBP13.57□□□□□ -0.24
PDLIM7-216ENST00000506537 CAV2P51636 162 aa13.57□□□□□ -0.24
PDLIM7-216ENST00000506537 LYZP61626 148 aa13.57□□□□□ -0.24
PDLIM7-216ENST00000506537 C16orf54Q6UWD8 224 aa13.57□□□□□ -0.24
PDLIM7-216ENST00000506537 OR10P1Q8NGE3 313 aa13.57□□□□□ -0.24
PDLIM7-216ENST00000506537 NARS2Q96I59 477 aaKnown RBP13.57□□□□□ -0.24
PDLIM7-216ENST00000506537 NMES1Q9C002 83 aa13.57□□□□□ -0.24
PDLIM7-216ENST00000506537 IGSF23A1L1A6 192 aa13.56□□□□□ -0.24
PDLIM7-216ENST00000506537 FNDC10F2Z333 226 aa13.56□□□□□ -0.24
PDLIM7-216ENST00000506537 BUB3O43684 328 aa13.56□□□□□ -0.24
PDLIM7-216ENST00000506537 EIF2B2P49770 351 aaKnown RBP13.56□□□□□ -0.24
PDLIM7-216ENST00000506537 BCAP31P51572 246 aa13.56□□□□□ -0.24
PDLIM7-216ENST00000506537 HAGHQ16775 308 aa13.56□□□□□ -0.24
PDLIM7-216ENST00000506537 FAM24BQ8N5W8 94 aa13.56□□□□□ -0.24
PDLIM7-216ENST00000506537 LYRM2Q9NU23 88 aaPredicted RBP13.56□□□□□ -0.24
PDLIM7-216ENST00000506537 ALG5Q9Y673 324 aa13.56□□□□□ -0.24
PDLIM7-216ENST00000506537 NBEAL2Q6ZNJ1 2754 aa13.56□□□□□ -0.24
PDLIM7-216ENST00000506537 DEDDO75618 318 aa13.55□□□□□ -0.24
PDLIM7-216ENST00000506537 CST7O76096 145 aa13.55□□□□□ -0.24
PDLIM7-216ENST00000506537 PVALBP20472 110 aaPredicted RBP13.55□□□□□ -0.24
PDLIM7-216ENST00000506537 RPL11P62913 178 aaKnown RBP13.55□□□□□ -0.24
PDLIM7-216ENST00000506537 WFDC3Q8IUB2 231 aa13.55□□□□□ -0.24
PDLIM7-216ENST00000506537 GRAMD2BQ96HH9 432 aa13.55□□□□□ -0.24
PDLIM7-216ENST00000506537 FAM110AQ9BQ89 295 aa13.55□□□□□ -0.24
PDLIM7-216ENST00000506537 TM2D3Q9BRN9 247 aa13.55□□□□□ -0.24
PDLIM7-216ENST00000506537 MGAT4CQ9UBM8 478 aa13.55□□□□□ -0.24
PDLIM7-216ENST00000506537 H0YIZ8 118 aa13.54□□□□□ -0.24
PDLIM7-216ENST00000506537 SLC38A11Q08AI6 406 aa13.54□□□□□ -0.24
PDLIM7-216ENST00000506537 ZNF124Q15973 351 aa13.54□□□□□ -0.24
PDLIM7-216ENST00000506537 LRRC37A5PQ49AS3 106 aa13.54□□□□□ -0.24
PDLIM7-216ENST00000506537 CYP2G1PQ6ZSU1 146 aa13.54□□□□□ -0.24
PDLIM7-216ENST00000506537 STXBP6Q8NFX7 210 aa13.54□□□□□ -0.24
PDLIM7-216ENST00000506537 GGACTQ9BVM4 153 aa13.54□□□□□ -0.24
PDLIM7-216ENST00000506537 MAP6D1Q9H9H5 199 aa13.54□□□□□ -0.24
PDLIM7-216ENST00000506537 OR5AC2Q9NZP5 309 aa13.54□□□□□ -0.24
PDLIM7-216ENST00000506537 DNAH7Q8WXX0 4024 aa13.54□□□□□ -0.24
PDLIM7-216ENST00000506537 TRAV2A0A0B4J234 112 aa13.53□□□□□ -0.24
PDLIM7-216ENST00000506537 PAFAH1B2P68402 229 aa13.53□□□□□ -0.24
PDLIM7-216ENST00000506537 APRG1Q8IVJ8 170 aa13.53□□□□□ -0.24
PDLIM7-216ENST00000506537 TMEM252Q8N6L7 170 aa13.53□□□□□ -0.24
PDLIM7-216ENST00000506537 TMEM217Q8N7C4 229 aa13.53□□□□□ -0.24
PDLIM7-216ENST00000506537 BPIFCQ8NFQ6 507 aa13.53□□□□□ -0.24
PDLIM7-216ENST00000506537 DCANP1Q8TF63 244 aa13.53□□□□□ -0.24
PDLIM7-216ENST00000506537 NPVFQ9HCQ7 196 aa13.53□□□□□ -0.24
PDLIM7-216ENST00000506537 U3KQK5 164 aa13.53□□□□□ -0.24
PDLIM7-216ENST00000506537 HELTA6NFD8 242 aa13.52□□□□□ -0.25
PDLIM7-216ENST00000506537 K7EQG2 157 aa13.52□□□□□ -0.25
PDLIM7-216ENST00000506537 DNASE2O00115 360 aaPredicted RBP13.52□□□□□ -0.25
PDLIM7-216ENST00000506537 CFDP00746 253 aaPredicted RBP13.52□□□□□ -0.25
PDLIM7-216ENST00000506537 SULT1A1P50225 295 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms