RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 NDUFB11Q9NX14 153 aa2.03□□□□□ -2.08
TRAPPC13-208ENST00000505553 TNRC6CQ9HCJ0 1690 aaKnown RBP2.03□□□□□ -2.08
TRAPPC13-208ENST00000505553 TRPM1Q7Z4N2 1603 aa2.03□□□□□ -2.08
TRAPPC13-208ENST00000505553 CICQ96RK0 1608 aaPredicted RBP2.03□□□□□ -2.08
TRAPPC13-208ENST00000505553 DSCAMO60469 2012 aa2.03□□□□□ -2.08
TRAPPC13-208ENST00000505553 GPR179Q6PRD1 2367 aa2.03□□□□□ -2.08
TRAPPC13-208ENST00000505553 YTHDC2Q9H6S0 1430 aaKnown RBP2.03□□□□□ -2.09
TRAPPC13-208ENST00000505553 AKAP12Q02952 1782 aa2.02□□□□□ -2.09
TRAPPC13-208ENST00000505553 CPDO75976 1380 aa2.02□□□□□ -2.09
TRAPPC13-208ENST00000505553 CUL9Q8IWT3 2517 aa2.02□□□□□ -2.09
TRAPPC13-208ENST00000505553 IFT172Q9UG01 1749 aa2.02□□□□□ -2.09
TRAPPC13-208ENST00000505553 PIK3C2AO00443 1686 aa2.02□□□□□ -2.09
TRAPPC13-208ENST00000505553 NHSQ6T4R5 1651 aa2.02□□□□□ -2.09
TRAPPC13-208ENST00000505553 ALS2Q96Q42 1657 aa2.02□□□□□ -2.09
TRAPPC13-208ENST00000505553 TRAV7A0A075B6U4 112 aa2.02□□□□□ -2.09
TRAPPC13-208ENST00000505553 H7C2G1 150 aa2.02□□□□□ -2.09
TRAPPC13-208ENST00000505553 C19orf84I3L1E1 186 aa2.02□□□□□ -2.09
TRAPPC13-208ENST00000505553 OR2J2O76002 312 aa2.02□□□□□ -2.09
TRAPPC13-208ENST00000505553 IFNA21P01568 189 aa2.02□□□□□ -2.09
TRAPPC13-208ENST00000505553 ATP5G3P48201 142 aa2.02□□□□□ -2.09
TRAPPC13-208ENST00000505553 PIGPP57054 158 aa2.02□□□□□ -2.09
TRAPPC13-208ENST00000505553 GNG5P63218 68 aa2.02□□□□□ -2.09
TRAPPC13-208ENST00000505553 RHEBQ15382 184 aa2.02□□□□□ -2.09
TRAPPC13-208ENST00000505553 DEFB115Q30KQ5 88 aa2.02□□□□□ -2.09
TRAPPC13-208ENST00000505553 SCGB2B2Q4G0G5 96 aa2.02□□□□□ -2.09
TRAPPC13-208ENST00000505553 RPP25LQ8N5L8 163 aaKnown RBP2.02□□□□□ -2.09
TRAPPC13-208ENST00000505553 ZNF439Q8NDP4 499 aa2.02□□□□□ -2.09
TRAPPC13-208ENST00000505553 OR51T1Q8NGJ9 327 aa2.02□□□□□ -2.09
TRAPPC13-208ENST00000505553 C20orf166-AS1Q96NR2 134 aa2.02□□□□□ -2.09
TRAPPC13-208ENST00000505553 DDA1Q9BW61 102 aa2.02□□□□□ -2.09
TRAPPC13-208ENST00000505553 CHST6Q9GZX3 395 aa2.02□□□□□ -2.09
TRAPPC13-208ENST00000505553 ACER3Q9NUN7 267 aa2.02□□□□□ -2.09
TRAPPC13-208ENST00000505553 SS18L2Q9UHA2 77 aa2.02□□□□□ -2.09
TRAPPC13-208ENST00000505553 ERGIC3Q9Y282 383 aa2.02□□□□□ -2.09
TRAPPC13-208ENST00000505553 PHRF1Q9P1Y6 1649 aaKnown RBP2.02□□□□□ -2.09
TRAPPC13-208ENST00000505553 SEC16AO15027 2179 aa2.02□□□□□ -2.09
TRAPPC13-208ENST00000505553 PRR14LQ5THK1 2151 aa2.02□□□□□ -2.09
TRAPPC13-208ENST00000505553 SBF2Q86WG5 1849 aa2.02□□□□□ -2.09
TRAPPC13-208ENST00000505553 PPIP5K1Q6PFW1 1433 aa2.02□□□□□ -2.09
TRAPPC13-208ENST00000505553 NSD3Q9BZ95 1437 aa2.02□□□□□ -2.09
TRAPPC13-208ENST00000505553 LCTP09848 1927 aa2.01□□□□□ -2.09
TRAPPC13-208ENST00000505553 CACNA1SQ13698 1873 aa2.01□□□□□ -2.09
TRAPPC13-208ENST00000505553 IGHV3-64A0A075B6Q5 118 aa2.01□□□□□ -2.09
TRAPPC13-208ENST00000505553 GNG14A0A1W2PPG7 69 aa2.01□□□□□ -2.09
TRAPPC13-208ENST00000505553 SIGLEC16A6NMB1 481 aa2.01□□□□□ -2.09
TRAPPC13-208ENST00000505553 CLDN25C9JDP6 229 aa2.01□□□□□ -2.09
TRAPPC13-208ENST00000505553 H3BQV1 296 aa2.01□□□□□ -2.09
TRAPPC13-208ENST00000505553 ZNF73O43830 326 aaPredicted RBP2.01□□□□□ -2.09
TRAPPC13-208ENST00000505553 PFDN1O60925 122 aa2.01□□□□□ -2.09
TRAPPC13-208ENST00000505553 CRHP06850 196 aa2.01□□□□□ -2.09
TRAPPC13-208ENST00000505553 P0C880 135 aa2.01□□□□□ -2.09
TRAPPC13-208ENST00000505553 RPS4Y1P22090 263 aaKnown RBP2.01□□□□□ -2.09
TRAPPC13-208ENST00000505553 EVX1P49640 407 aa2.01□□□□□ -2.09
TRAPPC13-208ENST00000505553 HINT1P49773 126 aaPredicted RBP2.01□□□□□ -2.09
TRAPPC13-208ENST00000505553 DEFA3P59666 94 aa2.01□□□□□ -2.09
TRAPPC13-208ENST00000505553 CDC42P60953 191 aa2.01□□□□□ -2.09
TRAPPC13-208ENST00000505553 ZNF90Q03938 601 aa2.01□□□□□ -2.09
TRAPPC13-208ENST00000505553 TAF9Q16594 264 aa2.01□□□□□ -2.09
TRAPPC13-208ENST00000505553 LCA10Q71F78 164 aa2.01□□□□□ -2.09
TRAPPC13-208ENST00000505553 MIR17HGQ75NE6 70 aa2.01□□□□□ -2.09
TRAPPC13-208ENST00000505553 TAC4Q86UU9 113 aa2.01□□□□□ -2.09
TRAPPC13-208ENST00000505553 DNAJC9Q8WXX5 260 aa2.01□□□□□ -2.09
TRAPPC13-208ENST00000505553 MALSU1Q96EH3 234 aa2.01□□□□□ -2.09
TRAPPC13-208ENST00000505553 Q9BRP9 147 aa2.01□□□□□ -2.09
TRAPPC13-208ENST00000505553 QSER1Q2KHR3 1735 aa2.01□□□□□ -2.09
TRAPPC13-208ENST00000505553 CRYBG1Q9Y4K1 1723 aa2.01□□□□□ -2.09
TRAPPC13-208ENST00000505553 RALGAPA2Q2PPJ7 1873 aa2.01□□□□□ -2.09
TRAPPC13-208ENST00000505553 DOCK5Q9H7D0 1870 aa2.01□□□□□ -2.09
TRAPPC13-208ENST00000505553 ABCC6O95255 1503 aa2□□□□□ -2.09
TRAPPC13-208ENST00000505553 TRAV41A0A0B4J266 112 aa2□□□□□ -2.09
TRAPPC13-208ENST00000505553 MUC21A0A0G2JKD1 596 aa2□□□□□ -2.09
TRAPPC13-208ENST00000505553 MUC21A0A140T8X8 626 aa2□□□□□ -2.09
TRAPPC13-208ENST00000505553 TRAPPC2LH3BP13 241 aa2□□□□□ -2.09
TRAPPC13-208ENST00000505553 BUB1B-PAK6H3BSN5 160 aa2□□□□□ -2.09
TRAPPC13-208ENST00000505553 GPR31O00270 319 aa2□□□□□ -2.09
TRAPPC13-208ENST00000505553 APOA2P02652 100 aa2□□□□□ -2.09
TRAPPC13-208ENST00000505553 RPSAP08865 295 aaKnown RBP2□□□□□ -2.09
TRAPPC13-208ENST00000505553 EIF2B2P49770 351 aaKnown RBP2□□□□□ -2.09
TRAPPC13-208ENST00000505553 ZNF80P51504 273 aaPredicted RBP2□□□□□ -2.09
TRAPPC13-208ENST00000505553 TNFRSF9Q07011 255 aa2□□□□□ -2.09
TRAPPC13-208ENST00000505553 FOXF1Q12946 379 aa2□□□□□ -2.09
TRAPPC13-208ENST00000505553 HIST3H2BBQ8N257 126 aa2□□□□□ -2.09
TRAPPC13-208ENST00000505553 C10orf126Q8N4M7 172 aa2□□□□□ -2.09
TRAPPC13-208ENST00000505553 TERB2Q8NHR7 220 aa2□□□□□ -2.09
TRAPPC13-208ENST00000505553 C11orf40Q8WZ69 217 aa2□□□□□ -2.09
TRAPPC13-208ENST00000505553 GINS4Q9BRT9 223 aa2□□□□□ -2.09
TRAPPC13-208ENST00000505553 PBOV1Q9GZY1 135 aa2□□□□□ -2.09
TRAPPC13-208ENST00000505553 MIXL1Q9H2W2 232 aa2□□□□□ -2.09
TRAPPC13-208ENST00000505553 MED29Q9NX70 200 aa2□□□□□ -2.09
TRAPPC13-208ENST00000505553 CCL26Q9Y258 94 aa2□□□□□ -2.09
TRAPPC13-208ENST00000505553 COL24A1Q17RW2 1714 aa2□□□□□ -2.09
TRAPPC13-208ENST00000505553 KNDC1Q76NI1 1749 aa2□□□□□ -2.09
TRAPPC13-208ENST00000505553 PKD1L3Q7Z443 1732 aa2□□□□□ -2.09
TRAPPC13-208ENST00000505553 GOLGB1Q14789 3259 aaKnown RBP2□□□□□ -2.09
TRAPPC13-208ENST00000505553 LMO7Q8WWI1 1683 aa2□□□□□ -2.09
TRAPPC13-208ENST00000505553 BTAF1O14981 1849 aa2□□□□□ -2.09
TRAPPC13-208ENST00000505553 KIF1BO60333 1816 aa2□□□□□ -2.09
TRAPPC13-208ENST00000505553 RGPD8O14715 1765 aaPredicted RBP2□□□□□ -2.09
TRAPPC13-208ENST00000505553 COL4A4P53420 1690 aaPredicted RBP2□□□□□ -2.09
TRAPPC13-208ENST00000505553 IGKV3D-11A0A0A0MRZ8 115 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms