RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 OTORQ9NRC9 128 aa1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 NHP2Q9NX24 153 aaKnown RBP1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 RBM7Q9Y580 266 aaKnown RBP1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 U3KQ87 197 aa1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 SCN10AQ9Y5Y9 1956 aa1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 LTBP4Q8N2S1 1624 aa1.26□□□□□ -2.21
HMGB1P35-201ENST00000503360 SEC16AO15027 2179 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 CAMSAP2Q08AD1 1489 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 WDR7Q9Y4E6 1490 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 DOCK6Q96HP0 2047 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 THADAQ6YHU6 1953 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 CCDC171Q6TFL3 1326 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 A0A096LPI6 279 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 IGKV1-9A0A0C4DH69 117 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 GABARAPH6UMI1 98 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 H7C2G1 150 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 J3QR89 54 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 TMEM256-PLSCR3K7ERE1 68 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 M0R2Z0 102 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 SMIM24O75264 130 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 APOC1P02654 83 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 C1QCP02747 245 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 HTR1AP08908 422 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 P0DMU3 169 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 FAM231AP0DMU4 169 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 FAM231CP0DMU5 169 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 HLA-EP13747 358 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 ZNF22P17026 224 aaPredicted RBP1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 RNASE4P34096 147 aaKnown RBP1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 RPL35P42766 123 aaKnown RBP1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 EIF2B2P49770 351 aaKnown RBP1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 DYNLT3P51808 116 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 TMBIM6P55061 237 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 HIST1H1AQ02539 215 aaPredicted RBP1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 MSMO1Q15800 293 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 NDUFA5Q16718 116 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 KRTAP25-1Q3LHN0 102 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 KHDC3LQ587J8 217 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 PABPC1L2AQ5JQF8 200 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 EIF5AL1Q6IS14 154 aaKnown RBP1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 LYZL1Q6UWQ5 148 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 TMEM136Q6ZRR5 245 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 Q6ZS52 159 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 LINC00305Q7Z4B0 112 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 MSRB3Q8IXL7 192 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 SIGLECL1Q8N7X8 197 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 C1orf64Q8NEQ6 169 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 FGF13Q92913 245 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 MAGOHBQ96A72 148 aaKnown RBP1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 CRCT1Q9UGL9 99 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 RNF11Q9Y3C5 154 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 R4GN34 69 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 COL18A1P39060 1754 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 ADGBQ8N7X0 1667 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 ATG2BQ96BY7 2078 aa1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 ZNF638Q14966 1978 aaKnown RBP1.25□□□□□ -2.21
HMGB1P35-201ENST00000503360 OVOS2A0A0G2JMS6 1433 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 SPATA31E1Q6ZUB1 1445 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 RFX7Q2KHR2 1363 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 DSCAMO60469 2012 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 IGHV3-64A0A075B6Q5 118 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 TRAV7A0A075B6U4 112 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 TRBV7-6A0A0J9YX20 115 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 TRBV10-2A0A0K0K1G8 114 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 C11orf86A6NJI1 115 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 H3BMG7 143 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 C3orf84H3BNL1 204 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 NDUFB3O43676 98 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 HIST1H2BKO60814 126 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 CPSF4O95639 269 aaKnown RBP1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 NAPSAO96009 420 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 IGKV1-16P04430 117 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 IFNA4P05014 189 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 HIST1H2BJP06899 126 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 METTL15P1P0C7V9 234 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 COX6A1P12074 109 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 FABP2P12104 132 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 FUSP35637 526 aaKnown RBP eCLIP1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 DNAJB13P59910 316 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 SUPT4H1P63272 117 aaKnown RBP1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 SELENOWP63302 87 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 HBBP68871 147 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 RHOGP84095 191 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 SLC38A11Q08AI6 406 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 IGFBP7Q16270 282 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 WHAMMP3Q1A5X7 153 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 VMA21Q3ZAQ7 101 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 SLC35E3Q7Z769 313 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 PDZD9Q8IXQ8 264 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 LINC00304Q8N9R0 145 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 Q8NDZ9 215 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 OR4S1Q8NGB4 309 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 OR51A4Q8NGJ6 313 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 OR5D16Q8NGK9 328 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 ZNF714Q96N38 554 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 AP1S3Q96PC3 154 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 PRADC1Q9BSG0 188 aa1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 ZNF471Q9BX82 626 aaPredicted RBP1.24□□□□□ -2.21
HMGB1P35-201ENST00000503360 NPCDR1Q9BY65 106 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms