RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 KIAA0141Q14154 515 aaPredicted RBP5.52□□□□□ -1.53
USP39-219ENST00000496047 ELOBQ15370 118 aa5.52□□□□□ -1.53
USP39-219ENST00000496047 CTRB2Q6GPI1 263 aa5.52□□□□□ -1.53
USP39-219ENST00000496047 ZNF562Q6V9R5 426 aa5.52□□□□□ -1.53
USP39-219ENST00000496047 LINC00305Q7Z4B0 112 aa5.52□□□□□ -1.53
USP39-219ENST00000496047 LHFPL4Q7Z7J7 247 aa5.52□□□□□ -1.53
USP39-219ENST00000496047 OR51G1Q8NGK1 321 aa5.52□□□□□ -1.53
USP39-219ENST00000496047 OR1B1Q8NGR6 318 aa5.52□□□□□ -1.53
USP39-219ENST00000496047 OR2T6Q8NHC8 308 aa5.52□□□□□ -1.53
USP39-219ENST00000496047 FAM210BQ96KR6 192 aa5.52□□□□□ -1.53
USP39-219ENST00000496047 TMEM68Q96MH6 324 aa5.52□□□□□ -1.53
USP39-219ENST00000496047 IMMP2LQ96T52 175 aa5.52□□□□□ -1.53
USP39-219ENST00000496047 SLC25A33Q9BSK2 321 aa5.52□□□□□ -1.53
USP39-219ENST00000496047 CHRDL1Q9BU40 450 aa5.52□□□□□ -1.53
USP39-219ENST00000496047 OR51M1Q9H341 326 aa5.52□□□□□ -1.53
USP39-219ENST00000496047 SAV1Q9H4B6 383 aaPredicted RBP5.52□□□□□ -1.53
USP39-219ENST00000496047 ZNF355PQ9NSJ1 428 aa5.52□□□□□ -1.53
USP39-219ENST00000496047 HIGD1AQ9Y241 93 aa5.52□□□□□ -1.53
USP39-219ENST00000496047 URGCP-MRPS24S4R325 110 aa5.52□□□□□ -1.53
USP39-219ENST00000496047 TRBV24-1A0A075B6N3 115 aa5.51□□□□□ -1.53
USP39-219ENST00000496047 TRAV9-1A0A075B6T8 112 aa5.51□□□□□ -1.53
USP39-219ENST00000496047 IGKV1OR2-108A0A075B7D4 117 aa5.51□□□□□ -1.53
USP39-219ENST00000496047 A0A1W2PPR1 153 aa5.51□□□□□ -1.53
USP39-219ENST00000496047 E7EUB6 86 aa5.51□□□□□ -1.53
USP39-219ENST00000496047 NPFFO15130 113 aa5.51□□□□□ -1.53
USP39-219ENST00000496047 NDUFS7O75251 213 aa5.51□□□□□ -1.53
USP39-219ENST00000496047 EIF3GO75821 320 aaKnown RBP eCLIP5.51□□□□□ -1.53
USP39-219ENST00000496047 IGHV4-39P01824 125 aa5.51□□□□□ -1.53
USP39-219ENST00000496047 S100A8P05109 93 aa5.51□□□□□ -1.53
USP39-219ENST00000496047 SLC25A16P16260 332 aa5.51□□□□□ -1.53
USP39-219ENST00000496047 ORM2P19652 201 aa5.51□□□□□ -1.53
USP39-219ENST00000496047 GATA3P23771 443 aa5.51□□□□□ -1.53
USP39-219ENST00000496047 GNG4P50150 75 aa5.51□□□□□ -1.53
USP39-219ENST00000496047 DLX1P56177 255 aa5.51□□□□□ -1.53
USP39-219ENST00000496047 FAM3BP58499 235 aaPredicted RBP5.51□□□□□ -1.53
USP39-219ENST00000496047 PLP1P60201 277 aa5.51□□□□□ -1.53
USP39-219ENST00000496047 LYZP61626 148 aa5.51□□□□□ -1.53
USP39-219ENST00000496047 LMO4P61968 165 aa5.51□□□□□ -1.53
USP39-219ENST00000496047 UBE2G1P62253 170 aa5.51□□□□□ -1.53
USP39-219ENST00000496047 SUMO1P63165 101 aaKnown RBP5.51□□□□□ -1.53
USP39-219ENST00000496047 PRB3Q04118 309 aaPredicted RBP5.51□□□□□ -1.53
USP39-219ENST00000496047 EBI3Q14213 229 aa5.51□□□□□ -1.53
USP39-219ENST00000496047 SPATA31B1PQ5VZV4 182 aa5.51□□□□□ -1.53
USP39-219ENST00000496047 OR5T1Q8NG75 326 aa5.51□□□□□ -1.53
USP39-219ENST00000496047 OR10G8Q8NGN5 311 aa5.51□□□□□ -1.53
USP39-219ENST00000496047 Q8WTZ3 238 aa5.51□□□□□ -1.53
USP39-219ENST00000496047 IGFBPL1Q8WX77 278 aa5.51□□□□□ -1.53
USP39-219ENST00000496047 SLC25A2Q9BXI2 301 aa5.51□□□□□ -1.53
USP39-219ENST00000496047 FNDC4Q9H6D8 234 aaPredicted RBP5.51□□□□□ -1.53
USP39-219ENST00000496047 ATMQ13315 3056 aa5.5□□□□□ -1.53
USP39-219ENST00000496047 HELTA6NFD8 242 aa5.5□□□□□ -1.53
USP39-219ENST00000496047 K7EQM0 130 aa5.5□□□□□ -1.53
USP39-219ENST00000496047 AP4M1O00189 453 aa5.5□□□□□ -1.53
USP39-219ENST00000496047 TOMM40O96008 361 aa5.5□□□□□ -1.53
USP39-219ENST00000496047 HLA-DRB1P01911 266 aa5.5□□□□□ -1.53
USP39-219ENST00000496047 OR10J4P0C629 311 aa5.5□□□□□ -1.53
USP39-219ENST00000496047 APELAP0DMC3 54 aa5.5□□□□□ -1.53
USP39-219ENST00000496047 GATA2P23769 480 aaPredicted RBP5.5□□□□□ -1.53
USP39-219ENST00000496047 ZFP36P26651 326 aaKnown RBP5.5□□□□□ -1.53
USP39-219ENST00000496047 SAA4P35542 130 aa5.5□□□□□ -1.53
USP39-219ENST00000496047 AKR1D1P51857 326 aa5.5□□□□□ -1.53
USP39-219ENST00000496047 TAS2R60P59551 318 aa5.5□□□□□ -1.53
USP39-219ENST00000496047 COX19Q49B96 90 aa5.5□□□□□ -1.53
USP39-219ENST00000496047 Q56UQ5 140 aa5.5□□□□□ -1.53
USP39-219ENST00000496047 LINC01551Q86U37 167 aa5.5□□□□□ -1.53
USP39-219ENST00000496047 ZFP82Q8N141 532 aa5.5□□□□□ -1.53
USP39-219ENST00000496047 TTC9CQ8N5M4 171 aa5.5□□□□□ -1.53
USP39-219ENST00000496047 OR4F17Q8NGA8 305 aa5.5□□□□□ -1.53
USP39-219ENST00000496047 C10orf105Q8TEF2 133 aa5.5□□□□□ -1.53
USP39-219ENST00000496047 C2CD4CQ8TF44 421 aa5.5□□□□□ -1.53
USP39-219ENST00000496047 SMIM12Q96EX1 92 aa5.5□□□□□ -1.53
USP39-219ENST00000496047 C1orf159Q96HA4 380 aa5.5□□□□□ -1.53
USP39-219ENST00000496047 SFRP2Q96HF1 295 aa5.5□□□□□ -1.53
USP39-219ENST00000496047 RITA1Q96K30 269 aa5.5□□□□□ -1.53
USP39-219ENST00000496047 ZNF48Q96MX3 618 aaPredicted RBP5.5□□□□□ -1.53
USP39-219ENST00000496047 TBX15Q96SF7 602 aa5.5□□□□□ -1.53
USP39-219ENST00000496047 TXN2Q99757 166 aa5.5□□□□□ -1.53
USP39-219ENST00000496047 PITPNC1Q9UKF7 332 aa5.5□□□□□ -1.53
USP39-219ENST00000496047 MOB4Q9Y3A3 225 aa5.5□□□□□ -1.53
USP39-219ENST00000496047 YTHDF2Q9Y5A9 579 aaKnown RBP5.5□□□□□ -1.53
USP39-219ENST00000496047 BOD1L1Q8NFC6 3051 aa5.5□□□□□ -1.53
USP39-219ENST00000496047 SPENQ96T58 3664 aaKnown RBP5.49□□□□□ -1.53
USP39-219ENST00000496047 IGKV1D-37A0A075B6S9 117 aa5.49□□□□□ -1.53
USP39-219ENST00000496047 TGIF2-C20orf24A0A0A6YYL0 155 aa5.49□□□□□ -1.53
USP39-219ENST00000496047 TRAV40A0A0B4J280 105 aa5.49□□□□□ -1.53
USP39-219ENST00000496047 A0A1W2PPQ1 181 aa5.49□□□□□ -1.53
USP39-219ENST00000496047 I3L2K1 104 aa5.49□□□□□ -1.53
USP39-219ENST00000496047 M0QZK8 103 aa5.49□□□□□ -1.53
USP39-219ENST00000496047 SLC25A5P05141 298 aaKnown RBP5.49□□□□□ -1.53
USP39-219ENST00000496047 IGLC1P0CG04 106 aa5.49□□□□□ -1.53
USP39-219ENST00000496047 RD3LP0DJH9 198 aa5.49□□□□□ -1.53
USP39-219ENST00000496047 RPL35P42766 123 aaKnown RBP5.49□□□□□ -1.53
USP39-219ENST00000496047 RAB9AP51151 201 aa5.49□□□□□ -1.53
USP39-219ENST00000496047 YPEL3P61236 119 aaPredicted RBP5.49□□□□□ -1.53
USP39-219ENST00000496047 ZNF90Q03938 601 aa5.49□□□□□ -1.53
USP39-219ENST00000496047 MLANAQ16655 118 aa5.49□□□□□ -1.53
USP39-219ENST00000496047 MRGPRG-AS1Q2M3A8 158 aa5.49□□□□□ -1.53
USP39-219ENST00000496047 RPEL1Q2QD12 228 aa5.49□□□□□ -1.53
USP39-219ENST00000496047 BPIFA4PQ86YQ2 179 aa5.49□□□□□ -1.53
USP39-219ENST00000496047 Q8N6K4 173 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms