RNA–Protein interactions for RNA: ENST00000495705.5

LMO4-204, Transcript of LIM domain only 4, humanhuman

TSL 3

Gene LMO4, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-204ENST00000495705 STX12Q86Y82 276 aa15.1■□□□□ 0.01
LMO4-204ENST00000495705 PPP1R1CQ8WVI7 109 aa15.1■□□□□ 0.01
LMO4-204ENST00000495705 WDR89Q96FK6 387 aaPredicted RBP15.1■□□□□ 0.01
LMO4-204ENST00000495705 VSIRQ9H7M9 311 aa15.1■□□□□ 0.01
LMO4-204ENST00000495705 NPVFQ9HCQ7 196 aa15.1■□□□□ 0.01
LMO4-204ENST00000495705 IGHV3-49A0A0A0MS15 119 aa15.09■□□□□ 0.01
LMO4-204ENST00000495705 ZNF785A8K8V0 405 aa15.09■□□□□ 0.01
LMO4-204ENST00000495705 CFDP00746 253 aaPredicted RBP15.09■□□□□ 0.01
LMO4-204ENST00000495705 CRYBB3P26998 211 aa15.09■□□□□ 0.01
LMO4-204ENST00000495705 SULT1A1P50225 295 aa15.09■□□□□ 0.01
LMO4-204ENST00000495705 ZNF90Q03938 601 aa15.09■□□□□ 0.01
LMO4-204ENST00000495705 RNF125Q96EQ8 232 aa15.09■□□□□ 0.01
LMO4-204ENST00000495705 LSM4Q9Y4Z0 139 aaKnown RBP15.09■□□□□ 0.01
LMO4-204ENST00000495705 SELENOKQ9Y6D0 94 aa15.09■□□□□ 0.01
LMO4-204ENST00000495705 TSPAN4O14817 238 aa15.08■□□□□ 0
LMO4-204ENST00000495705 HNRNPCP07910 306 aaKnown RBP eCLIP15.08■□□□□ 0
LMO4-204ENST00000495705 HBG1P69891 147 aa15.08■□□□□ 0
LMO4-204ENST00000495705 HBG2P69892 147 aa15.08■□□□□ 0
LMO4-204ENST00000495705 SLC38A11Q08AI6 406 aa15.08■□□□□ 0
LMO4-204ENST00000495705 ARL16Q0P5N6 197 aa15.08■□□□□ 0
LMO4-204ENST00000495705 USF2Q15853 346 aaPredicted RBP15.08■□□□□ 0
LMO4-204ENST00000495705 DEFB121Q5J5C9 76 aa15.08■□□□□ 0
LMO4-204ENST00000495705 TMEM252Q8N6L7 170 aa15.08■□□□□ 0
LMO4-204ENST00000495705 ST8SIA2Q92186 375 aa15.08■□□□□ 0
LMO4-204ENST00000495705 RNF2Q99496 336 aa15.08■□□□□ 0
LMO4-204ENST00000495705 SPAG8Q99932 426 aaPredicted RBP15.08■□□□□ 0
LMO4-204ENST00000495705 SMAD5-AS1Q9Y6J3 95 aa15.08■□□□□ 0
LMO4-204ENST00000495705 IGHV3OR16-13A0A075B7E8 117 aa15.07■□□□□ 0
LMO4-204ENST00000495705 IGHV3-74A0A0B4J1X5 117 aa15.07■□□□□ 0
LMO4-204ENST00000495705 CST7O76096 145 aa15.07■□□□□ 0
LMO4-204ENST00000495705 MPC2O95563 127 aa15.07■□□□□ 0
LMO4-204ENST00000495705 CXCL3P19876 107 aa15.07■□□□□ 0
LMO4-204ENST00000495705 NUP62P37198 522 aaPredicted RBP15.07■□□□□ 0
LMO4-204ENST00000495705 P2RY1P47900 373 aa15.07■□□□□ 0
LMO4-204ENST00000495705 FCN2Q15485 313 aa15.07■□□□□ 0
LMO4-204ENST00000495705 GRAMD2BQ96HH9 432 aa15.07■□□□□ 0
LMO4-204ENST00000495705 SLC25A31Q9H0C2 315 aa15.07■□□□□ 0
LMO4-204ENST00000495705 OR5AC2Q9NZP5 309 aa15.07■□□□□ 0
LMO4-204ENST00000495705 PFDN2Q9UHV9 154 aa15.07■□□□□ 0
LMO4-204ENST00000495705 RABAC1Q9UI14 185 aa15.07■□□□□ 0
LMO4-204ENST00000495705 PRKDCP78527 4128 aaKnown RBP15.07■□□□□ 0
LMO4-204ENST00000495705 IGSF23A1L1A6 192 aa15.06■□□□□ 0
LMO4-204ENST00000495705 H0YIZ8 118 aa15.06■□□□□ 0
LMO4-204ENST00000495705 APOHP02749 345 aaPredicted RBP15.06■□□□□ 0
LMO4-204ENST00000495705 S100A11P31949 105 aa15.06■□□□□ 0
LMO4-204ENST00000495705 TEPPQ6URK8 271 aa15.06■□□□□ 0
LMO4-204ENST00000495705 LILRB2Q8N423 598 aa15.06■□□□□ 0
LMO4-204ENST00000495705 TMEM217Q8N7C4 229 aa15.06■□□□□ 0
LMO4-204ENST00000495705 BPIFCQ8NFQ6 507 aa15.06■□□□□ 0
LMO4-204ENST00000495705 ASB13Q8WXK3 278 aa15.06■□□□□ 0
LMO4-204ENST00000495705 PBDC1Q9BVG4 233 aa15.06■□□□□ 0
LMO4-204ENST00000495705 U3KQE9 123 aa15.06■□□□□ 0
LMO4-204ENST00000495705 CD81P60033 236 aa15.05■□□□□ -0
LMO4-204ENST00000495705 LYZP61626 148 aa15.05■□□□□ -0
LMO4-204ENST00000495705 SELENOTP62341 195 aa15.05■□□□□ -0
LMO4-204ENST00000495705 OR2F1Q13607 317 aa15.05■□□□□ -0
LMO4-204ENST00000495705 TCF24Q7RTU0 167 aa15.05■□□□□ -0
LMO4-204ENST00000495705 Q8N1Y9 231 aa15.05■□□□□ -0
LMO4-204ENST00000495705 OR11H7Q8NGC8 314 aa15.05■□□□□ -0
LMO4-204ENST00000495705 IGHV3-66A0A0C4DH42 116 aa15.04■□□□□ -0
LMO4-204ENST00000495705 OR4C46A6NHA9 309 aa15.04■□□□□ -0
LMO4-204ENST00000495705 EIF2B2P49770 351 aaKnown RBP15.04■□□□□ -0
LMO4-204ENST00000495705 BAXQ07812 192 aa15.04■□□□□ -0
LMO4-204ENST00000495705 ATP6V1FQ16864 119 aa15.04■□□□□ -0
LMO4-204ENST00000495705 FAM90A2PQ658T7 463 aa15.04■□□□□ -0
LMO4-204ENST00000495705 CYP2G1PQ6ZSU1 146 aa15.04■□□□□ -0
LMO4-204ENST00000495705 NEURL2Q9BR09 285 aa15.04■□□□□ -0
LMO4-204ENST00000495705 TMEM147Q9BVK8 224 aa15.04■□□□□ -0
LMO4-204ENST00000495705 UQCC1Q9NVA1 299 aa15.04■□□□□ -0
LMO4-204ENST00000495705 EWSR1Q01844 656 aaKnown RBP eCLIP15.03■□□□□ -0
LMO4-204ENST00000495705 VWC2Q2TAL6 325 aa15.03■□□□□ -0
LMO4-204ENST00000495705 RNF126Q9BV68 326 aa15.03■□□□□ -0
LMO4-204ENST00000495705 SLC45A2Q9UMX9 530 aa15.03■□□□□ -0
LMO4-204ENST00000495705 DFFBO76075 338 aa15.02■□□□□ -0
LMO4-204ENST00000495705 CD7P09564 240 aa15.02■□□□□ -0
LMO4-204ENST00000495705 GIPP09681 153 aaPredicted RBP15.02■□□□□ -0
LMO4-204ENST00000495705 S100A7P31151 101 aa15.02■□□□□ -0
LMO4-204ENST00000495705 PAFAH1B2P68402 229 aa15.02■□□□□ -0
LMO4-204ENST00000495705 ZNF546Q86UE3 836 aa15.02■□□□□ -0
LMO4-204ENST00000495705 MBD2Q9UBB5 411 aa15.02■□□□□ -0
LMO4-204ENST00000495705 HELTA6NFD8 242 aa15.01□□□□□ -0.01
LMO4-204ENST00000495705 BUB3O43684 328 aa15.01□□□□□ -0.01
LMO4-204ENST00000495705 GATA2P23769 480 aaPredicted RBP15.01□□□□□ -0.01
LMO4-204ENST00000495705 RAB31Q13636 194 aa15.01□□□□□ -0.01
LMO4-204ENST00000495705 C16orf54Q6UWD8 224 aa15.01□□□□□ -0.01
LMO4-204ENST00000495705 THAP6Q8TBB0 222 aa15.01□□□□□ -0.01
LMO4-204ENST00000495705 TRAV2A0A0B4J234 112 aa15□□□□□ -0.01
LMO4-204ENST00000495705 A8MZ25 164 aa15□□□□□ -0.01
LMO4-204ENST00000495705 LYL1P12980 280 aa15□□□□□ -0.01
LMO4-204ENST00000495705 RPL11P62913 178 aaKnown RBP15□□□□□ -0.01
LMO4-204ENST00000495705 NHLH2Q02577 135 aa15□□□□□ -0.01
LMO4-204ENST00000495705 FGL1Q08830 312 aa15□□□□□ -0.01
LMO4-204ENST00000495705 TMEM182Q6ZP80 229 aaPredicted RBP15□□□□□ -0.01
LMO4-204ENST00000495705 OR5C1Q8NGR4 320 aa15□□□□□ -0.01
LMO4-204ENST00000495705 GLMPQ8WWB7 406 aa15□□□□□ -0.01
LMO4-204ENST00000495705 PPP1R14BQ96C90 147 aa15□□□□□ -0.01
LMO4-204ENST00000495705 B9D2Q9BPU9 175 aa15□□□□□ -0.01
LMO4-204ENST00000495705 WDR83OSQ9Y284 106 aa15□□□□□ -0.01
LMO4-204ENST00000495705 IGKV3-7A0A075B6H7 116 aa14.99□□□□□ -0.01
LMO4-204ENST00000495705 UBE2L5PA0A1B0GUS4 154 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 183 ms