RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 GGCTO75223 188 aaKnown RBP10.89□□□□□ -0.67
GPC1-209ENST00000495100 P01737 135 aa10.89□□□□□ -0.67
GPC1-209ENST00000495100 AMY1AP04745 511 aa10.89□□□□□ -0.67
GPC1-209ENST00000495100 ECSCRQ19T08 205 aa10.89□□□□□ -0.67
GPC1-209ENST00000495100 OR52E5Q8NH55 327 aa10.89□□□□□ -0.67
GPC1-209ENST00000495100 OR8B2Q96RD0 313 aa10.89□□□□□ -0.67
GPC1-209ENST00000495100 RASL11BQ9BPW5 248 aa10.89□□□□□ -0.67
GPC1-209ENST00000495100 TMUB1Q9BVT8 246 aa10.89□□□□□ -0.67
GPC1-209ENST00000495100 HOXB1P14653 301 aaPredicted RBP10.89□□□□□ -0.67
GPC1-209ENST00000495100 TMEM183BQ1AE95 376 aa10.89□□□□□ -0.67
GPC1-209ENST00000495100 RUSC1-AS1Q66K80 236 aa10.89□□□□□ -0.67
GPC1-209ENST00000495100 RNASE6Q93091 150 aaKnown RBP10.89□□□□□ -0.67
GPC1-209ENST00000495100 A0A1W2PPI3 338 aa10.89□□□□□ -0.67
GPC1-209ENST00000495100 MBD3L4A6NDZ8 208 aaPredicted RBP10.89□□□□□ -0.67
GPC1-209ENST00000495100 MBD3L3A6NE82 208 aaPredicted RBP10.89□□□□□ -0.67
GPC1-209ENST00000495100 MBD3L5A6NJ08 208 aaPredicted RBP10.89□□□□□ -0.67
GPC1-209ENST00000495100 CCKARP32238 428 aa10.89□□□□□ -0.67
GPC1-209ENST00000495100 RNF151Q2KHN1 245 aa10.89□□□□□ -0.67
GPC1-209ENST00000495100 MBD3L2Q8NHZ7 208 aaPredicted RBP10.89□□□□□ -0.67
GPC1-209ENST00000495100 FAM57AQ8TBR7 257 aa10.89□□□□□ -0.67
GPC1-209ENST00000495100 H0YJW9 148 aa10.88□□□□□ -0.67
GPC1-209ENST00000495100 HYPMO75409 117 aa10.88□□□□□ -0.67
GPC1-209ENST00000495100 GCGP01275 180 aa10.88□□□□□ -0.67
GPC1-209ENST00000495100 HTR1DP28221 377 aa10.88□□□□□ -0.67
GPC1-209ENST00000495100 PPIFP30405 207 aaKnown RBP10.88□□□□□ -0.67
GPC1-209ENST00000495100 TCTEX1D1Q8N7M0 179 aa10.88□□□□□ -0.67
GPC1-209ENST00000495100 TMEM14BQ9NUH8 114 aa10.88□□□□□ -0.67
GPC1-209ENST00000495100 CTSZQ9UBR2 303 aa10.88□□□□□ -0.67
GPC1-209ENST00000495100 RNF24Q9Y225 148 aa10.88□□□□□ -0.67
GPC1-209ENST00000495100 NDUFS7O75251 213 aa10.88□□□□□ -0.67
GPC1-209ENST00000495100 IL4P05112 153 aa10.88□□□□□ -0.67
GPC1-209ENST00000495100 FOSL1P15407 271 aa10.88□□□□□ -0.67
GPC1-209ENST00000495100 SRSF12Q8WXF0 261 aaKnown RBP10.88□□□□□ -0.67
GPC1-209ENST00000495100 SNHG12Q9BXW3 62 aa10.88□□□□□ -0.67
GPC1-209ENST00000495100 LSM4Q9Y4Z0 139 aaKnown RBP10.88□□□□□ -0.67
GPC1-209ENST00000495100 A8MWP6 167 aa10.88□□□□□ -0.67
GPC1-209ENST00000495100 F2RL2O00254 374 aa10.88□□□□□ -0.67
GPC1-209ENST00000495100 RBPJQ06330 500 aa10.88□□□□□ -0.67
GPC1-209ENST00000495100 SLAQ13239 276 aa10.88□□□□□ -0.67
GPC1-209ENST00000495100 SFXN3Q9BWM7 321 aa10.88□□□□□ -0.67
GPC1-209ENST00000495100 PEX7O00628 323 aa10.87□□□□□ -0.67
GPC1-209ENST00000495100 GNG7O60262 68 aa10.87□□□□□ -0.67
GPC1-209ENST00000495100 FBXL7Q9UJT9 491 aa10.87□□□□□ -0.67
GPC1-209ENST00000495100 LINC00312Q9Y6C7 94 aa10.87□□□□□ -0.67
GPC1-209ENST00000495100 TCF21O43680 179 aa10.87□□□□□ -0.67
GPC1-209ENST00000495100 PPOXP50336 477 aa10.87□□□□□ -0.67
GPC1-209ENST00000495100 NUDT10Q8NFP7 164 aa10.87□□□□□ -0.67
GPC1-209ENST00000495100 NUDT11Q96G61 164 aa10.87□□□□□ -0.67
GPC1-209ENST00000495100 C17orf77Q96MU5 243 aa10.87□□□□□ -0.67
GPC1-209ENST00000495100 NDUFAF3Q9BU61 184 aa10.87□□□□□ -0.67
GPC1-209ENST00000495100 E7EQL1 145 aa10.87□□□□□ -0.67
GPC1-209ENST00000495100 P0C879 139 aa10.87□□□□□ -0.67
GPC1-209ENST00000495100 LCN2P80188 198 aa10.87□□□□□ -0.67
GPC1-209ENST00000495100 SLC25A48Q6ZT89 311 aaKnown RBP10.87□□□□□ -0.67
GPC1-209ENST00000495100 DCHS2Q6V1P9 2916 aa10.86□□□□□ -0.67
GPC1-209ENST00000495100 PKD1L2Q7Z442 2459 aa10.86□□□□□ -0.67
GPC1-209ENST00000495100 MAS1LP35410 378 aa10.86□□□□□ -0.67
GPC1-209ENST00000495100 Q71RC1 249 aaPredicted RBP10.86□□□□□ -0.67
GPC1-209ENST00000495100 VSTM2AQ8TAG5 236 aa10.86□□□□□ -0.67
GPC1-209ENST00000495100 CDC42EP3Q9UKI2 254 aa10.86□□□□□ -0.67
GPC1-209ENST00000495100 TMEM178BH3BS89 294 aa10.86□□□□□ -0.67
GPC1-209ENST00000495100 OR8A1Q8NGG7 326 aa10.86□□□□□ -0.67
GPC1-209ENST00000495100 ACANP16112 2415 aa10.86□□□□□ -0.67
GPC1-209ENST00000495100 CBY3A6NI87 242 aa10.85□□□□□ -0.67
GPC1-209ENST00000495100 TIMM23O14925 209 aa10.85□□□□□ -0.67
GPC1-209ENST00000495100 Q6ZS92 163 aa10.85□□□□□ -0.67
GPC1-209ENST00000495100 LY6DQ14210 128 aa10.85□□□□□ -0.67
GPC1-209ENST00000495100 TMEM116Q8NCL8 245 aa10.85□□□□□ -0.67
GPC1-209ENST00000495100 PRSS33Q8NF86 280 aa10.85□□□□□ -0.67
GPC1-209ENST00000495100 RBM14Q96PK6 669 aaKnown RBP10.85□□□□□ -0.67
GPC1-209ENST00000495100 UBTD1Q9HAC8 227 aa10.85□□□□□ -0.67
GPC1-209ENST00000495100 OR2J3O76001 311 aa10.85□□□□□ -0.67
GPC1-209ENST00000495100 Q8N7P7 452 aa10.85□□□□□ -0.67
GPC1-209ENST00000495100 C1orf159Q96HA4 380 aa10.85□□□□□ -0.67
GPC1-209ENST00000495100 RNF114Q9Y508 228 aa10.85□□□□□ -0.67
GPC1-209ENST00000495100 HIVEP2P31629 2446 aa10.85□□□□□ -0.67
GPC1-209ENST00000495100 PSG1P11464 419 aa10.84□□□□□ -0.67
GPC1-209ENST00000495100 PERPQ96FX8 193 aa10.84□□□□□ -0.67
GPC1-209ENST00000495100 CELSR1Q9NYQ6 3014 aa10.84□□□□□ -0.67
GPC1-209ENST00000495100 C11orf42Q8N5U0 333 aa10.84□□□□□ -0.67
GPC1-209ENST00000495100 OSR1Q8TAX0 266 aaPredicted RBP10.84□□□□□ -0.67
GPC1-209ENST00000495100 V9GYV3 84 aa10.84□□□□□ -0.67
GPC1-209ENST00000495100 IGLV3-9A0A075B6K5 115 aa10.84□□□□□ -0.67
GPC1-209ENST00000495100 PRRX1P54821 245 aa10.84□□□□□ -0.67
GPC1-209ENST00000495100 SPACA3Q8IXA5 215 aa10.84□□□□□ -0.67
GPC1-209ENST00000495100 ZNF503Q96F45 646 aa10.84□□□□□ -0.67
GPC1-209ENST00000495100 Q9H3A6 140 aa10.84□□□□□ -0.67
GPC1-209ENST00000495100 HIF1ANQ9NWT6 349 aa10.84□□□□□ -0.67
GPC1-209ENST00000495100 HIGD1AQ9Y241 93 aa10.84□□□□□ -0.67
GPC1-209ENST00000495100 RAXQ9Y2V3 346 aa10.84□□□□□ -0.67
GPC1-209ENST00000495100 JMJD1CQ15652 2540 aa10.83□□□□□ -0.68
GPC1-209ENST00000495100 TBR1Q16650 682 aa10.83□□□□□ -0.68
GPC1-209ENST00000495100 NUP35Q8NFH5 326 aa10.83□□□□□ -0.68
GPC1-209ENST00000495100 PRSS3P2Q8NHM4 247 aa10.83□□□□□ -0.68
GPC1-209ENST00000495100 Q8TAT8 98 aa10.83□□□□□ -0.68
GPC1-209ENST00000495100 KCNS1Q96KK3 526 aa10.83□□□□□ -0.68
GPC1-209ENST00000495100 OR2T8A6NH00 312 aa10.83□□□□□ -0.68
GPC1-209ENST00000495100 CT45A10P0DMU9 189 aa10.83□□□□□ -0.68
GPC1-209ENST00000495100 IGHV1-8P0DP01 117 aa10.83□□□□□ -0.68
GPC1-209ENST00000495100 RPL15P61313 204 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms