RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 COPZ2Q9P299 210 aa9.68□□□□□ -0.86
SAMM50-204ENST00000493161 YTHDF2Q9Y5A9 579 aaKnown RBP9.68□□□□□ -0.86
SAMM50-204ENST00000493161 PRM2P04554 102 aa9.67□□□□□ -0.86
SAMM50-204ENST00000493161 OR5AC1P0C628 307 aa9.67□□□□□ -0.86
SAMM50-204ENST00000493161 SLC24A4Q8NFF2 622 aa9.67□□□□□ -0.86
SAMM50-204ENST00000493161 OR52E5Q8NH55 327 aa9.67□□□□□ -0.86
SAMM50-204ENST00000493161 OR52I2Q8NH67 350 aa9.67□□□□□ -0.86
SAMM50-204ENST00000493161 MARCH1Q8TCQ1 289 aa9.67□□□□□ -0.86
SAMM50-204ENST00000493161 GPR146Q96CH1 333 aa9.67□□□□□ -0.86
SAMM50-204ENST00000493161 CACNG5Q9UF02 275 aa9.67□□□□□ -0.86
SAMM50-204ENST00000493161 APOBP04114 4563 aaKnown RBP9.66□□□□□ -0.86
SAMM50-204ENST00000493161 LOC102723971A0A1B0GUV8 181 aa9.66□□□□□ -0.86
SAMM50-204ENST00000493161 CEBPZOSA8MTT3 80 aa9.66□□□□□ -0.86
SAMM50-204ENST00000493161 SOCS3O14543 225 aa9.66□□□□□ -0.86
SAMM50-204ENST00000493161 CDK2AP2O75956 126 aa9.66□□□□□ -0.86
SAMM50-204ENST00000493161 CDS2O95674 445 aa9.66□□□□□ -0.86
SAMM50-204ENST00000493161 NCS1P62166 190 aa9.66□□□□□ -0.86
SAMM50-204ENST00000493161 OXA1LQ15070 435 aa9.66□□□□□ -0.86
SAMM50-204ENST00000493161 ZNF79Q15937 498 aa9.66□□□□□ -0.86
SAMM50-204ENST00000493161 FOXI2Q6ZQN5 318 aa9.66□□□□□ -0.86
SAMM50-204ENST00000493161 SELENOHQ8IZQ5 122 aaKnown RBP9.66□□□□□ -0.86
SAMM50-204ENST00000493161 ARRDC1Q8N5I2 433 aa9.66□□□□□ -0.86
SAMM50-204ENST00000493161 TERB2Q8NHR7 220 aa9.66□□□□□ -0.86
SAMM50-204ENST00000493161 GLYATL2Q8WU03 294 aa9.66□□□□□ -0.86
SAMM50-204ENST00000493161 PBDC1Q9BVG4 233 aa9.66□□□□□ -0.86
SAMM50-204ENST00000493161 TMEM222Q9H0R3 208 aa9.66□□□□□ -0.86
SAMM50-204ENST00000493161 RORCP51449 518 aa9.65□□□□□ -0.86
SAMM50-204ENST00000493161 ZNF90Q03938 601 aa9.65□□□□□ -0.86
SAMM50-204ENST00000493161 SCGB2B2Q4G0G5 96 aa9.65□□□□□ -0.86
SAMM50-204ENST00000493161 FAM78BQ5VT40 261 aa9.65□□□□□ -0.86
SAMM50-204ENST00000493161 CCDC71LQ8N9Z2 235 aa9.65□□□□□ -0.86
SAMM50-204ENST00000493161 ZFAND1Q8TCF1 268 aa9.65□□□□□ -0.86
SAMM50-204ENST00000493161 RNF125Q96EQ8 232 aa9.65□□□□□ -0.86
SAMM50-204ENST00000493161 RTBDNQ9BSG5 229 aaPredicted RBP9.65□□□□□ -0.86
SAMM50-204ENST00000493161 TEX48A0A1B0GUV7 120 aa9.64□□□□□ -0.87
SAMM50-204ENST00000493161 GSTZ1O43708 216 aaPredicted RBP9.64□□□□□ -0.87
SAMM50-204ENST00000493161 HBE1P02100 147 aa9.64□□□□□ -0.87
SAMM50-204ENST00000493161 VBP1P61758 197 aa9.64□□□□□ -0.87
SAMM50-204ENST00000493161 DAD1P61803 113 aa9.64□□□□□ -0.87
SAMM50-204ENST00000493161 PSG9Q00887 426 aa9.64□□□□□ -0.87
SAMM50-204ENST00000493161 ETFRF1Q6IPR1 90 aa9.64□□□□□ -0.87
SAMM50-204ENST00000493161 FAAP20Q6NZ36 180 aa9.64□□□□□ -0.87
SAMM50-204ENST00000493161 FAM219AQ8IW50 185 aa9.64□□□□□ -0.87
SAMM50-204ENST00000493161 C20orf173Q96LM9 149 aa9.64□□□□□ -0.87
SAMM50-204ENST00000493161 CLUHP3Q96NS8 147 aa9.64□□□□□ -0.87
SAMM50-204ENST00000493161 ABHD1Q96SE0 405 aa9.64□□□□□ -0.87
SAMM50-204ENST00000493161 C7orf50Q9BRJ6 194 aaKnown RBP9.64□□□□□ -0.87
SAMM50-204ENST00000493161 MTFP1Q9UDX5 166 aa9.64□□□□□ -0.87
SAMM50-204ENST00000493161 GOLT1BQ9Y3E0 138 aa9.64□□□□□ -0.87
SAMM50-204ENST00000493161 IGKV1D-37A0A075B6S9 117 aa9.63□□□□□ -0.87
SAMM50-204ENST00000493161 TEX13DA0A0J9YY54 714 aaPredicted RBP9.63□□□□□ -0.87
SAMM50-204ENST00000493161 FAM25AB3EWG3 89 aa9.63□□□□□ -0.87
SAMM50-204ENST00000493161 FAM25CB3EWG5 89 aa9.63□□□□□ -0.87
SAMM50-204ENST00000493161 FAM25GB3EWG6 89 aa9.63□□□□□ -0.87
SAMM50-204ENST00000493161 ID1P41134 155 aa9.63□□□□□ -0.87
SAMM50-204ENST00000493161 PSMB3P49720 205 aa9.63□□□□□ -0.87
SAMM50-204ENST00000493161 RRN3P1Q2M238 152 aa9.63□□□□□ -0.87
SAMM50-204ENST00000493161 NMSQ5H8A3 153 aa9.63□□□□□ -0.87
SAMM50-204ENST00000493161 TMEM268Q5VZI3 342 aa9.63□□□□□ -0.87
SAMM50-204ENST00000493161 COQ8AQ8NI60 647 aa9.63□□□□□ -0.87
SAMM50-204ENST00000493161 RBPMSQ93062 196 aaKnown RBP9.63□□□□□ -0.87
SAMM50-204ENST00000493161 KRTAP3-3Q9BYR6 98 aa9.63□□□□□ -0.87
SAMM50-204ENST00000493161 KRTAP3-2Q9BYR7 98 aa9.63□□□□□ -0.87
SAMM50-204ENST00000493161 PRR13Q9NZ81 148 aa9.63□□□□□ -0.87
SAMM50-204ENST00000493161 TMED3Q9Y3Q3 217 aa9.63□□□□□ -0.87
SAMM50-204ENST00000493161 HERC1Q15751 4861 aa9.63□□□□□ -0.87
SAMM50-204ENST00000493161 A0A0J9YX75 114 aa9.62□□□□□ -0.87
SAMM50-204ENST00000493161 NBDYA0A0U1RRE5 68 aa9.62□□□□□ -0.87
SAMM50-204ENST00000493161 RAB3DO95716 219 aa9.62□□□□□ -0.87
SAMM50-204ENST00000493161 PAX9P55771 341 aa9.62□□□□□ -0.87
SAMM50-204ENST00000493161 AMTNQ6UX39 209 aa9.62□□□□□ -0.87
SAMM50-204ENST00000493161 ZNRF2Q8NHG8 242 aa9.62□□□□□ -0.87
SAMM50-204ENST00000493161 C17orf77Q96MU5 243 aa9.62□□□□□ -0.87
SAMM50-204ENST00000493161 NAA60Q9H7X0 242 aa9.62□□□□□ -0.87
SAMM50-204ENST00000493161 ZNF705GA8MUZ8 300 aaPredicted RBP9.61□□□□□ -0.87
SAMM50-204ENST00000493161 B3GALNT1O75752 331 aa9.61□□□□□ -0.87
SAMM50-204ENST00000493161 TBPP20226 339 aa9.61□□□□□ -0.87
SAMM50-204ENST00000493161 FAM3BP58499 235 aaPredicted RBP9.61□□□□□ -0.87
SAMM50-204ENST00000493161 LYZP61626 148 aa9.61□□□□□ -0.87
SAMM50-204ENST00000493161 OR2F1Q13607 317 aa9.61□□□□□ -0.87
SAMM50-204ENST00000493161 KLF9Q13886 244 aaPredicted RBP9.61□□□□□ -0.87
SAMM50-204ENST00000493161 GAMTQ14353 236 aa9.61□□□□□ -0.87
SAMM50-204ENST00000493161 OR8G2PQ6IF36 304 aa9.61□□□□□ -0.87
SAMM50-204ENST00000493161 Q8N1X5 172 aa9.61□□□□□ -0.87
SAMM50-204ENST00000493161 C6orf223Q8N319 242 aa9.61□□□□□ -0.87
SAMM50-204ENST00000493161 TMEM229BQ8NBD8 167 aa9.61□□□□□ -0.87
SAMM50-204ENST00000493161 ATG101Q9BSB4 218 aa9.61□□□□□ -0.87
SAMM50-204ENST00000493161 FUNDC2Q9BWH2 189 aa9.61□□□□□ -0.87
SAMM50-204ENST00000493161 MAGT1Q9H0U3 335 aa9.61□□□□□ -0.87
SAMM50-204ENST00000493161 EXTL2Q9UBQ6 330 aa9.61□□□□□ -0.87
SAMM50-204ENST00000493161 DNAH5Q8TE73 4624 aa9.61□□□□□ -0.87
SAMM50-204ENST00000493161 ZFP92A6NM28 416 aa9.6□□□□□ -0.87
SAMM50-204ENST00000493161 TNFAIP8O95379 198 aa9.6□□□□□ -0.87
SAMM50-204ENST00000493161 SUPT4H1P63272 117 aaKnown RBP9.6□□□□□ -0.87
SAMM50-204ENST00000493161 FCN2Q15485 313 aa9.6□□□□□ -0.87
SAMM50-204ENST00000493161 STEAP1BQ6NZ63 245 aa9.6□□□□□ -0.87
SAMM50-204ENST00000493161 EBLN2Q6P2I7 272 aa9.6□□□□□ -0.87
SAMM50-204ENST00000493161 C15orf53Q8NAA6 179 aa9.6□□□□□ -0.87
SAMM50-204ENST00000493161 RBKSQ9H477 322 aa9.6□□□□□ -0.87
SAMM50-204ENST00000493161 CRYM-AS1A6NIL9 109 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms