RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, human

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRA2A-208	ENST00000490942	PFDN2	Q9UHV9	154 aa		12.01	□□□□□ -0.49
TRA2A-208	ENST00000490942	NBEAL1	Q6ZS30	2694 aa		12.01	□□□□□ -0.49
TRA2A-208	ENST00000490942	TRAV25	A0A0B4J276	109 aa		12	□□□□□ -0.49
TRA2A-208	ENST00000490942	IGHV7-4-1	A0A0J9YVY3	117 aa		12	□□□□□ -0.49
TRA2A-208	ENST00000490942		A0A1W2PS18	150 aa		12	□□□□□ -0.49
TRA2A-208	ENST00000490942	SMCO3	A2RU48	225 aa		12	□□□□□ -0.49
TRA2A-208	ENST00000490942	MPDU1	O75352	247 aa		12	□□□□□ -0.49
TRA2A-208	ENST00000490942	CRYBB3	P26998	211 aa		12	□□□□□ -0.49
TRA2A-208	ENST00000490942	RPL12	P30050	165 aa	Known RBP	12	□□□□□ -0.49
TRA2A-208	ENST00000490942	NUP62	P37198	522 aa	Predicted RBP	12	□□□□□ -0.49
TRA2A-208	ENST00000490942	RAB31	Q13636	194 aa		12	□□□□□ -0.49
TRA2A-208	ENST00000490942	DEFB114	Q30KQ6	69 aa		12	□□□□□ -0.49
TRA2A-208	ENST00000490942	LILRB2	Q8N423	598 aa		12	□□□□□ -0.49
TRA2A-208	ENST00000490942	TMEM217	Q8N7C4	229 aa		12	□□□□□ -0.49
TRA2A-208	ENST00000490942	OR2T35	Q8NGX2	323 aa		12	□□□□□ -0.49
TRA2A-208	ENST00000490942	DYNLRB2	Q8TF09	96 aa		12	□□□□□ -0.49
TRA2A-208	ENST00000490942	CHAC2	Q8WUX2	184 aa		12	□□□□□ -0.49
TRA2A-208	ENST00000490942	METTL26	Q96S19	204 aa		12	□□□□□ -0.49
TRA2A-208	ENST00000490942	TMEM231	Q9H6L2	316 aa		12	□□□□□ -0.49
TRA2A-208	ENST00000490942	SMPX	Q9UHP9	88 aa		12	□□□□□ -0.49
TRA2A-208	ENST00000490942	SLC45A2	Q9UMX9	530 aa		12	□□□□□ -0.49
TRA2A-208	ENST00000490942	NOTCH1	P46531	2555 aa		12	□□□□□ -0.49
TRA2A-208	ENST00000490942	WI2-2373I1.2	A0A1W2PRP0	233 aa		11.99	□□□□□ -0.49
TRA2A-208	ENST00000490942	NPPC	P23582	126 aa		11.99	□□□□□ -0.49
TRA2A-208	ENST00000490942	S100A7	P31151	101 aa		11.99	□□□□□ -0.49
TRA2A-208	ENST00000490942	ZNF90	Q03938	601 aa		11.99	□□□□□ -0.49
TRA2A-208	ENST00000490942	LCN12	Q6JVE5	192 aa		11.99	□□□□□ -0.49
TRA2A-208	ENST00000490942	ZNF546	Q86UE3	836 aa		11.99	□□□□□ -0.49
TRA2A-208	ENST00000490942	BPIFC	Q8NFQ6	507 aa		11.99	□□□□□ -0.49
TRA2A-208	ENST00000490942	OR5C1	Q8NGR4	320 aa		11.99	□□□□□ -0.49
TRA2A-208	ENST00000490942	RNF125	Q96EQ8	232 aa		11.99	□□□□□ -0.49
TRA2A-208	ENST00000490942	NARS2	Q96I59	477 aa	Known RBP	11.99	□□□□□ -0.49
TRA2A-208	ENST00000490942	AQP10	Q96PS8	301 aa		11.99	□□□□□ -0.49
TRA2A-208	ENST00000490942	VSIR	Q9H7M9	311 aa		11.99	□□□□□ -0.49
TRA2A-208	ENST00000490942	WDR83OS	Q9Y284	106 aa		11.99	□□□□□ -0.49
TRA2A-208	ENST00000490942	HSPB11	Q9Y547	144 aa		11.99	□□□□□ -0.49
TRA2A-208	ENST00000490942	DFFB	O76075	338 aa		11.98	□□□□□ -0.49
TRA2A-208	ENST00000490942	IL4	P05112	153 aa		11.98	□□□□□ -0.49
TRA2A-208	ENST00000490942	PLP1	P60201	277 aa		11.98	□□□□□ -0.49
TRA2A-208	ENST00000490942	NHLH2	Q02577	135 aa		11.98	□□□□□ -0.49
TRA2A-208	ENST00000490942	PXDC1	Q5TGL8	231 aa		11.98	□□□□□ -0.49
TRA2A-208	ENST00000490942	CYP2G1P	Q6ZSU1	146 aa		11.98	□□□□□ -0.49
TRA2A-208	ENST00000490942		U3KQE9	123 aa		11.98	□□□□□ -0.49
TRA2A-208	ENST00000490942	CHEK1	O14757	476 aa		11.97	□□□□□ -0.49
TRA2A-208	ENST00000490942	HNRNPC	P07910	306 aa	Known RBP eCLIP	11.97	□□□□□ -0.49
TRA2A-208	ENST00000490942	LAMTOR1	Q6IAA8	161 aa		11.97	□□□□□ -0.49
TRA2A-208	ENST00000490942	GRAMD2B	Q96HH9	432 aa		11.97	□□□□□ -0.49
TRA2A-208	ENST00000490942	RHPN1-AS1	Q9BWJ2	59 aa		11.97	□□□□□ -0.49
TRA2A-208	ENST00000490942	MLX	Q9UH92	298 aa		11.97	□□□□□ -0.49
TRA2A-208	ENST00000490942	RABAC1	Q9UI14	185 aa		11.97	□□□□□ -0.49
TRA2A-208	ENST00000490942	ZNF256	Q9Y2P7	627 aa	Predicted RBP	11.97	□□□□□ -0.49
TRA2A-208	ENST00000490942	CMYA5	Q8N3K9	4069 aa		11.96	□□□□□ -0.49
TRA2A-208	ENST00000490942	EIF2B2	P49770	351 aa	Known RBP	11.96	□□□□□ -0.49
TRA2A-208	ENST00000490942	USF2	Q15853	346 aa	Predicted RBP	11.96	□□□□□ -0.49
TRA2A-208	ENST00000490942	CD300E	Q496F6	205 aa	Predicted RBP	11.96	□□□□□ -0.49
TRA2A-208	ENST00000490942	S100A7A	Q86SG5	101 aa		11.96	□□□□□ -0.49
TRA2A-208	ENST00000490942	INO80E	Q8NBZ0	244 aa	Predicted RBP	11.96	□□□□□ -0.49
TRA2A-208	ENST00000490942	ATP5S	Q99766	215 aa		11.96	□□□□□ -0.49
TRA2A-208	ENST00000490942	RNF24	Q9Y225	148 aa		11.96	□□□□□ -0.49
TRA2A-208	ENST00000490942	IGHV3OR16-8	A0A075B7F1	116 aa		11.95	□□□□□ -0.5
TRA2A-208	ENST00000490942		G3V3Q6	166 aa		11.95	□□□□□ -0.5
TRA2A-208	ENST00000490942	TSPAN4	O14817	238 aa		11.95	□□□□□ -0.5
TRA2A-208	ENST00000490942	AGPAT2	O15120	278 aa		11.95	□□□□□ -0.5
TRA2A-208	ENST00000490942	CAMLG	P49069	296 aa		11.95	□□□□□ -0.5
TRA2A-208	ENST00000490942	KRTAP10-11	P60412	298 aa		11.95	□□□□□ -0.5
TRA2A-208	ENST00000490942		Q5BKY6	102 aa		11.95	□□□□□ -0.5
TRA2A-208	ENST00000490942	C1orf194	Q5T5A4	169 aa		11.95	□□□□□ -0.5
TRA2A-208	ENST00000490942	BTNL8	Q6UX41	500 aa		11.95	□□□□□ -0.5
TRA2A-208	ENST00000490942	MGST2	Q99735	147 aa		11.95	□□□□□ -0.5
TRA2A-208	ENST00000490942	PARD6G	Q9BYG4	376 aa	Predicted RBP	11.95	□□□□□ -0.5
TRA2A-208	ENST00000490942	KCNIP2	Q9NS61	270 aa		11.95	□□□□□ -0.5
TRA2A-208	ENST00000490942	TNFSF18	Q9UNG2	199 aa		11.95	□□□□□ -0.5
TRA2A-208	ENST00000490942	UBE2L5P	A0A1B0GUS4	154 aa		11.94	□□□□□ -0.5
TRA2A-208	ENST00000490942	ZNF207	O43670	478 aa	Known RBP	11.94	□□□□□ -0.5
TRA2A-208	ENST00000490942	BUB3	O43684	328 aa		11.94	□□□□□ -0.5
TRA2A-208	ENST00000490942	EDN2	P20800	178 aa		11.94	□□□□□ -0.5
TRA2A-208	ENST00000490942	RPL29	P47914	159 aa	Known RBP	11.94	□□□□□ -0.5
TRA2A-208	ENST00000490942	AP2S1	P53680	142 aa	Predicted RBP	11.94	□□□□□ -0.5
TRA2A-208	ENST00000490942	OR2F1	Q13607	317 aa		11.94	□□□□□ -0.5
TRA2A-208	ENST00000490942	FAM90A2P	Q658T7	463 aa		11.94	□□□□□ -0.5
TRA2A-208	ENST00000490942	RBPMS2	Q6ZRY4	209 aa	Known RBP	11.94	□□□□□ -0.5
TRA2A-208	ENST00000490942	TMEM61	Q8N0U2	210 aa		11.94	□□□□□ -0.5
TRA2A-208	ENST00000490942	SPAG8	Q99932	426 aa	Predicted RBP	11.94	□□□□□ -0.5
TRA2A-208	ENST00000490942	NEURL2	Q9BR09	285 aa		11.94	□□□□□ -0.5
TRA2A-208	ENST00000490942	SORL1	Q92673	2214 aa		11.94	□□□□□ -0.5
TRA2A-208	ENST00000490942	FBN3	Q75N90	2809 aa		11.93	□□□□□ -0.5
TRA2A-208	ENST00000490942	TRAV2	A0A0B4J234	112 aa		11.93	□□□□□ -0.5
TRA2A-208	ENST00000490942	HELT	A6NFD8	242 aa		11.93	□□□□□ -0.5
TRA2A-208	ENST00000490942	LINC00869	P0C866	280 aa		11.93	□□□□□ -0.5
TRA2A-208	ENST00000490942	GP9	P14770	177 aa		11.93	□□□□□ -0.5
TRA2A-208	ENST00000490942	LYZ	P61626	148 aa		11.93	□□□□□ -0.5
TRA2A-208	ENST00000490942	PRR20E	P86478	221 aa		11.93	□□□□□ -0.5
TRA2A-208	ENST00000490942	PRR20C	P86479	221 aa		11.93	□□□□□ -0.5
TRA2A-208	ENST00000490942	PRR20D	P86480	221 aa		11.93	□□□□□ -0.5
TRA2A-208	ENST00000490942	PRR20B	P86481	221 aa		11.93	□□□□□ -0.5
TRA2A-208	ENST00000490942	PRR20A	P86496	221 aa		11.93	□□□□□ -0.5
TRA2A-208	ENST00000490942	ZNF266	Q14584	549 aa		11.93	□□□□□ -0.5
TRA2A-208	ENST00000490942	CLINT1	Q14677	625 aa		11.93	□□□□□ -0.5
TRA2A-208	ENST00000490942	OPCML	Q14982	345 aa		11.93	□□□□□ -0.5
TRA2A-208	ENST00000490942	TMEM182	Q6ZP80	229 aa	Predicted RBP	11.93	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 182.3 ms