RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 IGKV3-20P01619 116 aa11.33□□□□□ -0.6
PLOD3-216ENST00000489927 PSG1P11464 419 aa11.33□□□□□ -0.6
PLOD3-216ENST00000489927 NKX2-1P43699 371 aaPredicted RBP11.33□□□□□ -0.6
PLOD3-216ENST00000489927 FXYD7P58549 80 aa11.33□□□□□ -0.6
PLOD3-216ENST00000489927 ETFRF1Q6IPR1 90 aa11.33□□□□□ -0.6
PLOD3-216ENST00000489927 FAAP20Q6NZ36 180 aa11.33□□□□□ -0.6
PLOD3-216ENST00000489927 STEAP1BQ6NZ63 245 aa11.33□□□□□ -0.6
PLOD3-216ENST00000489927 C14orf166Q9Y224 244 aaKnown RBP11.33□□□□□ -0.6
PLOD3-216ENST00000489927 IGLV2-18A0A075B6J9 118 aa11.32□□□□□ -0.6
PLOD3-216ENST00000489927 IGHV3OR16-12A0A075B7B8 117 aa11.32□□□□□ -0.6
PLOD3-216ENST00000489927 TMEM189A5PLL7 270 aa11.32□□□□□ -0.6
PLOD3-216ENST00000489927 TMEM268Q5VZI3 342 aa11.32□□□□□ -0.6
PLOD3-216ENST00000489927 OR51G1Q8NGK1 321 aa11.32□□□□□ -0.6
PLOD3-216ENST00000489927 AP3S1Q92572 193 aa11.32□□□□□ -0.6
PLOD3-216ENST00000489927 WDR12Q9GZL7 423 aaKnown RBP11.32□□□□□ -0.6
PLOD3-216ENST00000489927 SMIM9A6NGZ8 99 aa11.31□□□□□ -0.6
PLOD3-216ENST00000489927 IFNA21P01568 189 aa11.31□□□□□ -0.6
PLOD3-216ENST00000489927 NMSQ5H8A3 153 aa11.31□□□□□ -0.6
PLOD3-216ENST00000489927 Q6ZR54 194 aa11.31□□□□□ -0.6
PLOD3-216ENST00000489927 UBE2DNLQ8IWF7 75 aa11.31□□□□□ -0.6
PLOD3-216ENST00000489927 ZNF709Q8N972 641 aa11.31□□□□□ -0.6
PLOD3-216ENST00000489927 RNF125Q96EQ8 232 aa11.31□□□□□ -0.6
PLOD3-216ENST00000489927 LINC00052Q96N35 136 aa11.31□□□□□ -0.6
PLOD3-216ENST00000489927 SAV1Q9H4B6 383 aaPredicted RBP11.31□□□□□ -0.6
PLOD3-216ENST00000489927 DKK2Q9UBU2 259 aa11.31□□□□□ -0.6
PLOD3-216ENST00000489927 CRYM-AS1A6NIL9 109 aa11.3□□□□□ -0.6
PLOD3-216ENST00000489927 ZNF182P17025 639 aaPredicted RBP11.3□□□□□ -0.6
PLOD3-216ENST00000489927 GPR107Q5VW38 600 aa11.3□□□□□ -0.6
PLOD3-216ENST00000489927 NOXA1Q86UR1 476 aa11.3□□□□□ -0.6
PLOD3-216ENST00000489927 C15orf40Q8WUR7 153 aa11.3□□□□□ -0.6
PLOD3-216ENST00000489927 FAM210BQ96KR6 192 aa11.3□□□□□ -0.6
PLOD3-216ENST00000489927 PBDC1Q9BVG4 233 aa11.3□□□□□ -0.6
PLOD3-216ENST00000489927 NAA50Q9GZZ1 169 aaKnown RBP11.3□□□□□ -0.6
PLOD3-216ENST00000489927 PLA2G2EQ9NZK7 142 aa11.3□□□□□ -0.6
PLOD3-216ENST00000489927 RFNGQ9Y644 331 aa11.3□□□□□ -0.6
PLOD3-216ENST00000489927 TMEM56-RWDD3S4R434 201 aa11.3□□□□□ -0.6
PLOD3-216ENST00000489927 GABARAPH6UMI1 98 aa11.29□□□□□ -0.6
PLOD3-216ENST00000489927 GABARAPO95166 117 aa11.29□□□□□ -0.6
PLOD3-216ENST00000489927 KLF9Q13886 244 aaPredicted RBP11.29□□□□□ -0.6
PLOD3-216ENST00000489927 SURF2Q15527 256 aaPredicted RBP11.29□□□□□ -0.6
PLOD3-216ENST00000489927 CTF1Q16619 201 aa11.29□□□□□ -0.6
PLOD3-216ENST00000489927 FAM222AQ5U5X8 452 aa11.29□□□□□ -0.6
PLOD3-216ENST00000489927 GSG1LQ6UXU4 331 aa11.29□□□□□ -0.6
PLOD3-216ENST00000489927 FOXI2Q6ZQN5 318 aa11.29□□□□□ -0.6
PLOD3-216ENST00000489927 NIPSNAP3BQ9BS92 247 aa11.29□□□□□ -0.6
PLOD3-216ENST00000489927 SLC35B3Q9H1N7 401 aa11.29□□□□□ -0.6
PLOD3-216ENST00000489927 PRR13Q9NZ81 148 aa11.29□□□□□ -0.6
PLOD3-216ENST00000489927 GPR132Q9UNW8 380 aa11.29□□□□□ -0.6
PLOD3-216ENST00000489927 SOCS3O14543 225 aa11.28□□□□□ -0.6
PLOD3-216ENST00000489927 SULT1A3P0DMM9 295 aa11.28□□□□□ -0.6
PLOD3-216ENST00000489927 SULT1A4P0DMN0 295 aa11.28□□□□□ -0.6
PLOD3-216ENST00000489927 HTN3P15516 51 aa11.28□□□□□ -0.6
PLOD3-216ENST00000489927 NUP62P37198 522 aaPredicted RBP11.28□□□□□ -0.6
PLOD3-216ENST00000489927 ID1P41134 155 aa11.28□□□□□ -0.6
PLOD3-216ENST00000489927 PSMB3P49720 205 aa11.28□□□□□ -0.6
PLOD3-216ENST00000489927 ZNF90Q03938 601 aa11.28□□□□□ -0.6
PLOD3-216ENST00000489927 OR8G2PQ6IF36 304 aa11.28□□□□□ -0.6
PLOD3-216ENST00000489927 OR4B1Q8NGF8 309 aa11.28□□□□□ -0.6
PLOD3-216ENST00000489927 CLUHP3Q96NS8 147 aa11.28□□□□□ -0.6
PLOD3-216ENST00000489927 MIXL1Q9H2W2 232 aa11.28□□□□□ -0.6
PLOD3-216ENST00000489927 CACFD1Q9UGQ2 172 aa11.28□□□□□ -0.6
PLOD3-216ENST00000489927 U3KQ87 197 aa11.28□□□□□ -0.6
PLOD3-216ENST00000489927 IGKV1D-37A0A075B6S9 117 aa11.27□□□□□ -0.61
PLOD3-216ENST00000489927 TEX48A0A1B0GUV7 120 aa11.27□□□□□ -0.61
PLOD3-216ENST00000489927 DISC1C4P0D8 188 aa11.27□□□□□ -0.61
PLOD3-216ENST00000489927 SSBP1Q04837 148 aaKnown RBP11.27□□□□□ -0.61
PLOD3-216ENST00000489927 ZNF79Q15937 498 aa11.27□□□□□ -0.61
PLOD3-216ENST00000489927 ZNF575Q86XF7 245 aa11.27□□□□□ -0.61
PLOD3-216ENST00000489927 LGI3Q8N145 548 aa11.27□□□□□ -0.61
PLOD3-216ENST00000489927 C1orf158Q8N1D5 194 aa11.27□□□□□ -0.61
PLOD3-216ENST00000489927 COQ8AQ8NI60 647 aa11.27□□□□□ -0.61
PLOD3-216ENST00000489927 DTD1Q8TEA8 209 aa11.27□□□□□ -0.61
PLOD3-216ENST00000489927 PFDN2Q9UHV9 154 aa11.27□□□□□ -0.61
PLOD3-216ENST00000489927 ZFP92A6NM28 416 aa11.26□□□□□ -0.61
PLOD3-216ENST00000489927 F6UB75 175 aa11.26□□□□□ -0.61
PLOD3-216ENST00000489927 GAMTQ14353 236 aa11.26□□□□□ -0.61
PLOD3-216ENST00000489927 RNF212Q495C1 297 aa11.26□□□□□ -0.61
PLOD3-216ENST00000489927 OR4C16Q8NGL9 310 aa11.26□□□□□ -0.61
PLOD3-216ENST00000489927 IL22RA2Q969J5 263 aa11.26□□□□□ -0.61
PLOD3-216ENST00000489927 RBKSQ9H477 322 aa11.26□□□□□ -0.61
PLOD3-216ENST00000489927 HSPB7Q9UBY9 170 aa11.26□□□□□ -0.61
PLOD3-216ENST00000489927 GOLT1BQ9Y3E0 138 aa11.26□□□□□ -0.61
PLOD3-216ENST00000489927 YTHDF2Q9Y5A9 579 aaKnown RBP11.26□□□□□ -0.61
PLOD3-216ENST00000489927 HSPG2P98160 4391 aa11.26□□□□□ -0.61
PLOD3-216ENST00000489927 LOC102723971A0A1B0GUV8 181 aa11.25□□□□□ -0.61
PLOD3-216ENST00000489927 RGS5O15539 181 aa11.25□□□□□ -0.61
PLOD3-216ENST00000489927 HBE1P02100 147 aa11.25□□□□□ -0.61
PLOD3-216ENST00000489927 AKAIN1P0CW23 69 aa11.25□□□□□ -0.61
PLOD3-216ENST00000489927 CCR6P51684 374 aa11.25□□□□□ -0.61
PLOD3-216ENST00000489927 PAX9P55771 341 aa11.25□□□□□ -0.61
PLOD3-216ENST00000489927 LYZP61626 148 aa11.25□□□□□ -0.61
PLOD3-216ENST00000489927 SUPT4H1P63272 117 aaKnown RBP11.25□□□□□ -0.61
PLOD3-216ENST00000489927 MRPS10P82664 201 aaKnown RBP11.25□□□□□ -0.61
PLOD3-216ENST00000489927 PSG9Q00887 426 aa11.25□□□□□ -0.61
PLOD3-216ENST00000489927 OXA1LQ15070 435 aa11.25□□□□□ -0.61
PLOD3-216ENST00000489927 SOHLH1Q5JUK2 328 aa11.25□□□□□ -0.61
PLOD3-216ENST00000489927 C1orf194Q5T5A4 169 aa11.25□□□□□ -0.61
PLOD3-216ENST00000489927 FAM78BQ5VT40 261 aa11.25□□□□□ -0.61
PLOD3-216ENST00000489927 OR51S1Q8NGJ8 323 aa11.25□□□□□ -0.61
PLOD3-216ENST00000489927 SMIM4Q8WVI0 70 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms