RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 CBLN1P23435 193 aa13.54□□□□□ -0.24
CPNE1-224ENST00000483359 TMEM182Q6ZP80 229 aaPredicted RBP13.54□□□□□ -0.24
CPNE1-224ENST00000483359 AP2S1P53680 142 aaPredicted RBP13.54□□□□□ -0.24
CPNE1-224ENST00000483359 ZNF546Q86UE3 836 aa13.54□□□□□ -0.24
CPNE1-224ENST00000483359 OR51G1Q8NGK1 321 aa13.54□□□□□ -0.24
CPNE1-224ENST00000483359 GINS3Q9BRX5 216 aa13.54□□□□□ -0.24
CPNE1-224ENST00000483359 IGHV3-66A0A0C4DH42 116 aa13.53□□□□□ -0.24
CPNE1-224ENST00000483359 LYZP61626 148 aa13.53□□□□□ -0.24
CPNE1-224ENST00000483359 USF2Q15853 346 aaPredicted RBP13.53□□□□□ -0.24
CPNE1-224ENST00000483359 VWC2Q2TAL6 325 aa13.53□□□□□ -0.24
CPNE1-224ENST00000483359 SAMD5Q5TGI4 173 aa13.53□□□□□ -0.24
CPNE1-224ENST00000483359 DYNLRB2Q8TF09 96 aa13.53□□□□□ -0.24
CPNE1-224ENST00000483359 ST6GAL2Q96JF0 529 aa13.53□□□□□ -0.24
CPNE1-224ENST00000483359 ARPC5O15511 151 aa13.52□□□□□ -0.24
CPNE1-224ENST00000483359 FABP1P07148 127 aa13.52□□□□□ -0.24
CPNE1-224ENST00000483359 NUP62P37198 522 aaPredicted RBP13.52□□□□□ -0.24
CPNE1-224ENST00000483359 ATP6V1FQ16864 119 aa13.52□□□□□ -0.24
CPNE1-224ENST00000483359 BTNL8Q6UX41 500 aa13.52□□□□□ -0.24
CPNE1-224ENST00000483359 CYP2G1PQ6ZSU1 146 aa13.52□□□□□ -0.24
CPNE1-224ENST00000483359 RNF125Q96EQ8 232 aa13.52□□□□□ -0.24
CPNE1-224ENST00000483359 MGST2Q99735 147 aa13.52□□□□□ -0.24
CPNE1-224ENST00000483359 LSM4Q9Y4Z0 139 aaKnown RBP13.52□□□□□ -0.24
CPNE1-224ENST00000483359 NBEAL1Q6ZS30 2694 aa13.52□□□□□ -0.25
CPNE1-224ENST00000483359 APOHP02749 345 aaPredicted RBP13.52□□□□□ -0.25
CPNE1-224ENST00000483359 FGF7P21781 194 aa13.52□□□□□ -0.25
CPNE1-224ENST00000483359 ELLP55199 621 aaPredicted RBP13.52□□□□□ -0.25
CPNE1-224ENST00000483359 INO80EQ8NBZ0 244 aaPredicted RBP13.52□□□□□ -0.25
CPNE1-224ENST00000483359 AQP10Q96PS8 301 aa13.52□□□□□ -0.25
CPNE1-224ENST00000483359 MLXQ9UH92 298 aa13.52□□□□□ -0.25
CPNE1-224ENST00000483359 TNFSF18Q9UNG2 199 aa13.52□□□□□ -0.25
CPNE1-224ENST00000483359 WDR83OSQ9Y284 106 aa13.52□□□□□ -0.25
CPNE1-224ENST00000483359 RNF222A6NCQ9 220 aa13.51□□□□□ -0.25
CPNE1-224ENST00000483359 AGPAT2O15120 278 aa13.51□□□□□ -0.25
CPNE1-224ENST00000483359 METTL26Q96S19 204 aa13.51□□□□□ -0.25
CPNE1-224ENST00000483359 ATP5SQ99766 215 aa13.51□□□□□ -0.25
CPNE1-224ENST00000483359 MRPL27Q9P0M9 148 aaKnown RBP13.51□□□□□ -0.25
CPNE1-224ENST00000483359 FBXL17Q9UF56 701 aa13.51□□□□□ -0.25
CPNE1-224ENST00000483359 IGHV7-4-1A0A0J9YVY3 117 aa13.51□□□□□ -0.25
CPNE1-224ENST00000483359 K7EMT4 169 aa13.51□□□□□ -0.25
CPNE1-224ENST00000483359 CAMLGP49069 296 aa13.51□□□□□ -0.25
CPNE1-224ENST00000483359 INSL3P51460 131 aa13.51□□□□□ -0.25
CPNE1-224ENST00000483359 AKAP14Q86UN6 197 aa13.51□□□□□ -0.25
CPNE1-224ENST00000483359 BPIFCQ8NFQ6 507 aa13.51□□□□□ -0.25
CPNE1-224ENST00000483359 OR11H4Q8NGC9 324 aa13.51□□□□□ -0.25
CPNE1-224ENST00000483359 GPR61Q9BZJ8 451 aa13.51□□□□□ -0.25
CPNE1-224ENST00000483359 DOK5Q9P104 306 aa13.51□□□□□ -0.25
CPNE1-224ENST00000483359 NOTCH1P46531 2555 aa13.5□□□□□ -0.25
CPNE1-224ENST00000483359 LINC00869P0C866 280 aa13.5□□□□□ -0.25
CPNE1-224ENST00000483359 NPPCP23582 126 aa13.5□□□□□ -0.25
CPNE1-224ENST00000483359 RHPN1-AS1Q9BWJ2 59 aa13.5□□□□□ -0.25
CPNE1-224ENST00000483359 WI2-2373I1.2A0A1W2PRP0 233 aa13.49□□□□□ -0.25
CPNE1-224ENST00000483359 IGLV1-51P01701 117 aa13.49□□□□□ -0.25
CPNE1-224ENST00000483359 ORM2P19652 201 aa13.49□□□□□ -0.25
CPNE1-224ENST00000483359 CD300CQ08708 224 aa13.49□□□□□ -0.25
CPNE1-224ENST00000483359 CD300EQ496F6 205 aaPredicted RBP13.49□□□□□ -0.25
CPNE1-224ENST00000483359 OR1B1Q8NGR6 318 aa13.49□□□□□ -0.25
CPNE1-224ENST00000483359 ST8SIA2Q92186 375 aa13.49□□□□□ -0.25
CPNE1-224ENST00000483359 MARC2Q969Z3 335 aa13.49□□□□□ -0.25
CPNE1-224ENST00000483359 GGTLC1Q9BX51 225 aa13.49□□□□□ -0.25
CPNE1-224ENST00000483359 WFDC1Q9HC57 220 aa13.49□□□□□ -0.25
CPNE1-224ENST00000483359 SIGLEC8Q9NYZ4 499 aa13.49□□□□□ -0.25
CPNE1-224ENST00000483359 SMPXQ9UHP9 88 aa13.49□□□□□ -0.25
CPNE1-224ENST00000483359 C8orf88P0DMB2 117 aa13.49□□□□□ -0.25
CPNE1-224ENST00000483359 MIC13Q5XKP0 118 aa13.49□□□□□ -0.25
CPNE1-224ENST00000483359 RABAC1Q9UI14 185 aa13.49□□□□□ -0.25
CPNE1-224ENST00000483359 IZUMO1RA6ND01 250 aa13.48□□□□□ -0.25
CPNE1-224ENST00000483359 DFFBO76075 338 aa13.48□□□□□ -0.25
CPNE1-224ENST00000483359 RAB31Q13636 194 aa13.48□□□□□ -0.25
CPNE1-224ENST00000483359 RNF2Q99496 336 aa13.48□□□□□ -0.25
CPNE1-224ENST00000483359 NPCDR1Q9BY65 106 aa13.48□□□□□ -0.25
CPNE1-224ENST00000483359 WDR61Q9GZS3 305 aaKnown RBP13.48□□□□□ -0.25
CPNE1-224ENST00000483359 CHEK1O14757 476 aa13.47□□□□□ -0.25
CPNE1-224ENST00000483359 HNRNPCP07910 306 aaKnown RBP eCLIP13.47□□□□□ -0.257e-7■■■□□ 17.1
CPNE1-224ENST00000483359 CRYBB3P26998 211 aa13.47□□□□□ -0.25
CPNE1-224ENST00000483359 KRTAP10-11P60412 298 aa13.47□□□□□ -0.25
CPNE1-224ENST00000483359 SELENOTP62341 195 aa13.47□□□□□ -0.25
CPNE1-224ENST00000483359 DEFB114Q30KQ6 69 aa13.47□□□□□ -0.25
CPNE1-224ENST00000483359 MFFQ9GZY8 342 aa13.47□□□□□ -0.25
CPNE1-224ENST00000483359 SLC45A2Q9UMX9 530 aa13.47□□□□□ -0.25
CPNE1-224ENST00000483359 IGKV3-7A0A075B6H7 116 aa13.47□□□□□ -0.25
CPNE1-224ENST00000483359 WIPF1O43516 503 aa13.47□□□□□ -0.25
CPNE1-224ENST00000483359 PRB2P02812 416 aaPredicted RBP13.47□□□□□ -0.25
CPNE1-224ENST00000483359 BEAN1Q3B7T3 259 aa13.47□□□□□ -0.25
CPNE1-224ENST00000483359 TCTE3Q8IZS6 198 aa13.47□□□□□ -0.25
CPNE1-224ENST00000483359 TMEM61Q8N0U2 210 aa13.47□□□□□ -0.25
CPNE1-224ENST00000483359 STPG3Q8N7X2 389 aa13.47□□□□□ -0.25
CPNE1-224ENST00000483359 PPP1R14BQ96C90 147 aa13.47□□□□□ -0.25
CPNE1-224ENST00000483359 ARL6Q9H0F7 186 aa13.47□□□□□ -0.25
CPNE1-224ENST00000483359 IFNA5P01569 189 aa13.46□□□□□ -0.25
CPNE1-224ENST00000483359 OR5G3P0C626 314 aa13.46□□□□□ -0.25
CPNE1-224ENST00000483359 NARS2Q96I59 477 aaKnown RBP13.46□□□□□ -0.25
CPNE1-224ENST00000483359 RSG1Q9BU20 258 aa13.46□□□□□ -0.25
CPNE1-224ENST00000483359 TECRQ9NZ01 308 aaKnown RBP13.46□□□□□ -0.25
CPNE1-224ENST00000483359 CFDP00746 253 aaPredicted RBP13.45□□□□□ -0.26
CPNE1-224ENST00000483359 EIF2B2P49770 351 aaKnown RBP13.45□□□□□ -0.26
CPNE1-224ENST00000483359 OPCMLQ14982 345 aa13.45□□□□□ -0.26
CPNE1-224ENST00000483359 UHRF2Q96PU4 802 aa13.45□□□□□ -0.26
CPNE1-224ENST00000483359 MPDU1O75352 247 aa13.45□□□□□ -0.26
CPNE1-224ENST00000483359 B2MP61769 119 aa13.45□□□□□ -0.26
CPNE1-224ENST00000483359 EGFEM1PQ0D2K5 195 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms