RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 OR51G1Q8NGK1 321 aa20.19■□□□□ 0.82
CCM2-211ENST00000478582 ASB13Q8WXK3 278 aa20.19■□□□□ 0.82
CCM2-211ENST00000478582 RHPN1-AS1Q9BWJ2 59 aa20.19■□□□□ 0.82
CCM2-211ENST00000478582 TRAV25A0A0B4J276 109 aa20.18■□□□□ 0.82
CCM2-211ENST00000478582 CHEK1O14757 476 aa20.18■□□□□ 0.82
CCM2-211ENST00000478582 CST7O76096 145 aa20.18■□□□□ 0.82
CCM2-211ENST00000478582 NPPCP23582 126 aa20.18■□□□□ 0.82
CCM2-211ENST00000478582 STX12Q86Y82 276 aa20.18■□□□□ 0.82
CCM2-211ENST00000478582 PRR25Q96S07 402 aa20.18■□□□□ 0.82
CCM2-211ENST00000478582 METTL26Q96S19 204 aa20.18■□□□□ 0.82
CCM2-211ENST00000478582 VSIRQ9H7M9 311 aa20.18■□□□□ 0.82
CCM2-211ENST00000478582 SMCO3A2RU48 225 aa20.17■□□□□ 0.82
CCM2-211ENST00000478582 ZNF785A8K8V0 405 aa20.17■□□□□ 0.82
CCM2-211ENST00000478582 S100A11P31949 105 aa20.17■□□□□ 0.82
CCM2-211ENST00000478582 SLC38A11Q08AI6 406 aa20.17■□□□□ 0.82
CCM2-211ENST00000478582 SLC25A31Q9H0C2 315 aa20.17■□□□□ 0.82
CCM2-211ENST00000478582 CFDP00746 253 aaPredicted RBP20.16■□□□□ 0.82
CCM2-211ENST00000478582 IL4P05112 153 aa20.16■□□□□ 0.82
CCM2-211ENST00000478582 BMI1P35226 326 aa20.16■□□□□ 0.82
CCM2-211ENST00000478582 HBG1P69891 147 aa20.16■□□□□ 0.82
CCM2-211ENST00000478582 HBG2P69892 147 aa20.16■□□□□ 0.82
CCM2-211ENST00000478582 TMEM61Q8N0U2 210 aa20.16■□□□□ 0.82
CCM2-211ENST00000478582 LSM4Q9Y4Z0 139 aaKnown RBP20.16■□□□□ 0.82
CCM2-211ENST00000478582 U3KQE9 123 aa20.16■□□□□ 0.82
CCM2-211ENST00000478582 LYL1P12980 280 aa20.15■□□□□ 0.82
CCM2-211ENST00000478582 USF2Q15853 346 aaPredicted RBP20.15■□□□□ 0.82
CCM2-211ENST00000478582 TMEM217Q8N7C4 229 aa20.15■□□□□ 0.82
CCM2-211ENST00000478582 RNF125Q96EQ8 232 aa20.15■□□□□ 0.82
CCM2-211ENST00000478582 B9D2Q9BPU9 175 aa20.15■□□□□ 0.82
CCM2-211ENST00000478582 A0A1W2PS18 150 aa20.14■□□□□ 0.81
CCM2-211ENST00000478582 APOHP02749 345 aaPredicted RBP20.14■□□□□ 0.81
CCM2-211ENST00000478582 GIPP09681 153 aaPredicted RBP20.14■□□□□ 0.81
CCM2-211ENST00000478582 ATP6V1FQ16864 119 aa20.14■□□□□ 0.81
CCM2-211ENST00000478582 VWC2Q2TAL6 325 aa20.14■□□□□ 0.81
CCM2-211ENST00000478582 LAMTOR1Q6IAA8 161 aa20.14■□□□□ 0.81
CCM2-211ENST00000478582 TEPPQ6URK8 271 aa20.14■□□□□ 0.81
CCM2-211ENST00000478582 SORL1Q92673 2214 aa20.14■□□□□ 0.81
CCM2-211ENST00000478582 IGHV3-49A0A0A0MS15 119 aa20.13■□□□□ 0.81
CCM2-211ENST00000478582 CD5P06127 495 aa20.13■□□□□ 0.81
CCM2-211ENST00000478582 HNRNPCP07910 306 aaKnown RBP eCLIP20.13■□□□□ 0.81
CCM2-211ENST00000478582 EWSR1Q01844 656 aaKnown RBP eCLIP20.13■□□□□ 0.81
CCM2-211ENST00000478582 BAXQ07812 192 aa20.13■□□□□ 0.81
CCM2-211ENST00000478582 OR2F1Q13607 317 aa20.13■□□□□ 0.81
CCM2-211ENST00000478582 RBPMS2Q6ZRY4 209 aaKnown RBP20.13■□□□□ 0.81
CCM2-211ENST00000478582 ST8SIA2Q92186 375 aa20.13■□□□□ 0.81
CCM2-211ENST00000478582 RNF2Q99496 336 aa20.13■□□□□ 0.81
CCM2-211ENST00000478582 TMEM231Q9H6L2 316 aa20.13■□□□□ 0.81
CCM2-211ENST00000478582 SELENOKQ9Y6D0 94 aa20.13■□□□□ 0.81
CCM2-211ENST00000478582 TSPAN4O14817 238 aa20.12■□□□□ 0.81
CCM2-211ENST00000478582 SELENOTP62341 195 aa20.12■□□□□ 0.81
CCM2-211ENST00000478582 NHLH2Q02577 135 aa20.12■□□□□ 0.81
CCM2-211ENST00000478582 FAM90A2PQ658T7 463 aa20.12■□□□□ 0.81
CCM2-211ENST00000478582 CYP2G1PQ6ZSU1 146 aa20.12■□□□□ 0.81
CCM2-211ENST00000478582 NARS2Q96I59 477 aaKnown RBP20.12■□□□□ 0.81
CCM2-211ENST00000478582 UQCC1Q9NVA1 299 aa20.12■□□□□ 0.81
CCM2-211ENST00000478582 MBD2Q9UBB5 411 aa20.12■□□□□ 0.81
CCM2-211ENST00000478582 RABAC1Q9UI14 185 aa20.12■□□□□ 0.81
CCM2-211ENST00000478582 IGHV3OR16-13A0A075B7E8 117 aa20.11■□□□□ 0.81
CCM2-211ENST00000478582 IGHV3-74A0A0B4J1X5 117 aa20.11■□□□□ 0.81
CCM2-211ENST00000478582 RAP2BP61225 183 aa20.11■□□□□ 0.81
CCM2-211ENST00000478582 TMEM182Q6ZP80 229 aaPredicted RBP20.11■□□□□ 0.81
CCM2-211ENST00000478582 LILRB2Q8N423 598 aa20.11■□□□□ 0.81
CCM2-211ENST00000478582 BPIFCQ8NFQ6 507 aa20.11■□□□□ 0.81
CCM2-211ENST00000478582 THAP6Q8TBB0 222 aa20.11■□□□□ 0.81
CCM2-211ENST00000478582 TMEM147Q9BVK8 224 aa20.11■□□□□ 0.81
CCM2-211ENST00000478582 EIF2B2P49770 351 aaKnown RBP20.1■□□□□ 0.81
CCM2-211ENST00000478582 FGL1Q08830 312 aa20.1■□□□□ 0.81
CCM2-211ENST00000478582 GUCA2BQ16661 112 aa20.1■□□□□ 0.81
CCM2-211ENST00000478582 Q8N1Y9 231 aa20.1■□□□□ 0.81
CCM2-211ENST00000478582 SPAG8Q99932 426 aaPredicted RBP20.1■□□□□ 0.81
CCM2-211ENST00000478582 LYZP61626 148 aa20.09■□□□□ 0.81
CCM2-211ENST00000478582 GRAMD2BQ96HH9 432 aa20.09■□□□□ 0.81
CCM2-211ENST00000478582 PBDC1Q9BVG4 233 aa20.09■□□□□ 0.81
CCM2-211ENST00000478582 WDR83OSQ9Y284 106 aa20.09■□□□□ 0.81
CCM2-211ENST00000478582 GATA2P23769 480 aaPredicted RBP20.08■□□□□ 0.81
CCM2-211ENST00000478582 GTSCR1Q86UQ5 136 aa20.08■□□□□ 0.81
CCM2-211ENST00000478582 OR5C1Q8NGR4 320 aa20.08■□□□□ 0.81
CCM2-211ENST00000478582 PFDN2Q9UHV9 154 aa20.08■□□□□ 0.81
CCM2-211ENST00000478582 SLC45A2Q9UMX9 530 aa20.08■□□□□ 0.81
CCM2-211ENST00000478582 IGHV3-66A0A0C4DH42 116 aa20.07■□□□□ 0.8
CCM2-211ENST00000478582 AGPAT2O15120 278 aa20.07■□□□□ 0.8
CCM2-211ENST00000478582 BUB3O43684 328 aa20.07■□□□□ 0.8
CCM2-211ENST00000478582 RPL12P30050 165 aaKnown RBP20.07■□□□□ 0.8
CCM2-211ENST00000478582 NUP62P37198 522 aaPredicted RBP20.07■□□□□ 0.8
CCM2-211ENST00000478582 PLP1P60201 277 aa20.07■□□□□ 0.8
CCM2-211ENST00000478582 C16orf54Q6UWD8 224 aa20.07■□□□□ 0.8
CCM2-211ENST00000478582 TCF24Q7RTU0 167 aa20.07■□□□□ 0.8
CCM2-211ENST00000478582 MGST2Q99735 147 aa20.07■□□□□ 0.8
CCM2-211ENST00000478582 HSPB11Q9Y547 144 aa20.07■□□□□ 0.8
CCM2-211ENST00000478582 DFFBO76075 338 aa20.06■□□□□ 0.8
CCM2-211ENST00000478582 RAB31Q13636 194 aa20.06■□□□□ 0.8
CCM2-211ENST00000478582 ZNF546Q86UE3 836 aa20.06■□□□□ 0.8
CCM2-211ENST00000478582 CHAC2Q8WUX2 184 aa20.06■□□□□ 0.8
CCM2-211ENST00000478582 Q5BKY6 102 aa20.05■□□□□ 0.8
CCM2-211ENST00000478582 STPG3Q8N7X2 389 aa20.05■□□□□ 0.8
CCM2-211ENST00000478582 GLMPQ8WWB7 406 aa20.05■□□□□ 0.8
CCM2-211ENST00000478582 SMAD5-AS1Q9Y6J3 95 aa20.05■□□□□ 0.8
CCM2-211ENST00000478582 DNAH9Q9NYC9 4486 aa20.05■□□□□ 0.8
CCM2-211ENST00000478582 LINC00869P0C866 280 aa20.04■□□□□ 0.8
CCM2-211ENST00000478582 CAMLGP49069 296 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms