RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 GBGT1Q8N5D6 347 aa9.71□□□□□ -0.86
PTPRF-212ENST00000477970 CHRDL1Q9BU40 450 aa9.71□□□□□ -0.86
PTPRF-212ENST00000477970 DLX1P56177 255 aa9.7□□□□□ -0.86
PTPRF-212ENST00000477970 TMEM18Q96B42 140 aa9.7□□□□□ -0.86
PTPRF-212ENST00000477970 SLC17A3O00476 420 aa9.7□□□□□ -0.86
PTPRF-212ENST00000477970 HNF1AP20823 631 aa9.7□□□□□ -0.86
PTPRF-212ENST00000477970 PDZD11Q5EBL8 140 aa9.7□□□□□ -0.86
PTPRF-212ENST00000477970 Q8N6K4 173 aa9.7□□□□□ -0.86
PTPRF-212ENST00000477970 IBA57Q5T440 356 aaKnown RBP9.69□□□□□ -0.86
PTPRF-212ENST00000477970 MBD6Q96DN6 1003 aa9.69□□□□□ -0.86
PTPRF-212ENST00000477970 PRDM13Q9H4Q3 707 aa9.69□□□□□ -0.86
PTPRF-212ENST00000477970 NPIPB5A8MRT5 1133 aa9.69□□□□□ -0.86
PTPRF-212ENST00000477970 LINC00587B1AMM8 73 aa9.69□□□□□ -0.86
PTPRF-212ENST00000477970 ADMP35318 185 aa9.69□□□□□ -0.86
PTPRF-212ENST00000477970 OR5I1Q13606 314 aa9.69□□□□□ -0.86
PTPRF-212ENST00000477970 OR1B1Q8NGR6 318 aa9.69□□□□□ -0.86
PTPRF-212ENST00000477970 WIPF2Q8TF74 440 aaPredicted RBP9.69□□□□□ -0.86
PTPRF-212ENST00000477970 RBM14Q96PK6 669 aaKnown RBP9.69□□□□□ -0.86
PTPRF-212ENST00000477970 C7orf69Q9H7B7 122 aa9.69□□□□□ -0.86
PTPRF-212ENST00000477970 MRPL27Q9P0M9 148 aaKnown RBP9.69□□□□□ -0.86
PTPRF-212ENST00000477970 EPDR1Q9UM22 224 aa9.69□□□□□ -0.86
PTPRF-212ENST00000477970 TRBV6-1A0A0K0K1D8 114 aa9.69□□□□□ -0.86
PTPRF-212ENST00000477970 FCN1O00602 326 aa9.69□□□□□ -0.86
PTPRF-212ENST00000477970 ARF6P62330 175 aa9.69□□□□□ -0.86
PTPRF-212ENST00000477970 HIGD1AQ9Y241 93 aa9.69□□□□□ -0.86
PTPRF-212ENST00000477970 Q0VG73 95 aa9.68□□□□□ -0.86
PTPRF-212ENST00000477970 MMDQ15546 238 aa9.68□□□□□ -0.86
PTPRF-212ENST00000477970 WNT10AQ9GZT5 417 aa9.68□□□□□ -0.86
PTPRF-212ENST00000477970 FASNP49327 2511 aaKnown RBP9.68□□□□□ -0.86
PTPRF-212ENST00000477970 K7EIM0 57 aa9.68□□□□□ -0.86
PTPRF-212ENST00000477970 PAX1P15863 534 aa9.68□□□□□ -0.86
PTPRF-212ENST00000477970 PLGLAQ15195 96 aa9.68□□□□□ -0.86
PTPRF-212ENST00000477970 C5orf64Q2M2E5 130 aa9.68□□□□□ -0.86
PTPRF-212ENST00000477970 KLK9Q2XQG4 91 aa9.68□□□□□ -0.86
PTPRF-212ENST00000477970 C5orf17Q8NAS9 161 aa9.68□□□□□ -0.86
PTPRF-212ENST00000477970 IGFBPL1Q8WX77 278 aa9.68□□□□□ -0.86
PTPRF-212ENST00000477970 FMC1Q96HJ9 113 aa9.68□□□□□ -0.86
PTPRF-212ENST00000477970 MRPL18Q9H0U6 180 aaKnown RBP9.68□□□□□ -0.86
PTPRF-212ENST00000477970 KLK9Q9UKQ9 250 aa9.68□□□□□ -0.86
PTPRF-212ENST00000477970 RNF24Q9Y225 148 aa9.68□□□□□ -0.86
PTPRF-212ENST00000477970 TBL2Q9Y4P3 447 aaKnown RBP9.68□□□□□ -0.86
PTPRF-212ENST00000477970 MALRD1Q5VYJ5 2156 aa9.68□□□□□ -0.86
PTPRF-212ENST00000477970 IGHV3-48P01763 117 aa9.67□□□□□ -0.86
PTPRF-212ENST00000477970 NBEAP1P0C6P0 100 aa9.67□□□□□ -0.86
PTPRF-212ENST00000477970 ORM2P19652 201 aa9.67□□□□□ -0.86
PTPRF-212ENST00000477970 ATG101Q9BSB4 218 aa9.67□□□□□ -0.86
PTPRF-212ENST00000477970 FLNCQ14315 2725 aa9.67□□□□□ -0.86
PTPRF-212ENST00000477970 TRAV30A0A087WSZ9 112 aa9.67□□□□□ -0.86
PTPRF-212ENST00000477970 IZUMO1RA6ND01 250 aa9.67□□□□□ -0.86
PTPRF-212ENST00000477970 GRAMD2BQ96HH9 432 aa9.67□□□□□ -0.86
PTPRF-212ENST00000477970 SIRPDQ9H106 197 aa9.67□□□□□ -0.86
PTPRF-212ENST00000477970 RNASE7Q9H1E1 156 aaKnown RBP9.67□□□□□ -0.86
PTPRF-212ENST00000477970 DOPEY1Q5JWR5 2465 aa9.67□□□□□ -0.86
PTPRF-212ENST00000477970 LY6HO94772 140 aa9.67□□□□□ -0.86
PTPRF-212ENST00000477970 GOSR1O95249 250 aa9.67□□□□□ -0.86
PTPRF-212ENST00000477970 TOMM40O96008 361 aa9.67□□□□□ -0.86
PTPRF-212ENST00000477970 PSG1P11464 419 aa9.67□□□□□ -0.86
PTPRF-212ENST00000477970 HOXB4P17483 251 aaPredicted RBP9.67□□□□□ -0.86
PTPRF-212ENST00000477970 ZNF562Q6V9R5 426 aa9.67□□□□□ -0.86
PTPRF-212ENST00000477970 OR8I2Q8N0Y5 310 aa9.67□□□□□ -0.86
PTPRF-212ENST00000477970 TTC9CQ8N5M4 171 aa9.67□□□□□ -0.86
PTPRF-212ENST00000477970 RASL11BQ9BPW5 248 aa9.67□□□□□ -0.86
PTPRF-212ENST00000477970 OTORQ9NRC9 128 aa9.67□□□□□ -0.86
PTPRF-212ENST00000477970 GZMBP10144 247 aa9.66□□□□□ -0.86
PTPRF-212ENST00000477970 EFNA4P52798 201 aa9.66□□□□□ -0.86
PTPRF-212ENST00000477970 VMO1Q7Z5L0 202 aa9.66□□□□□ -0.86
PTPRF-212ENST00000477970 BAGE2Q86Y30 109 aa9.66□□□□□ -0.86
PTPRF-212ENST00000477970 TMEM68Q96MH6 324 aa9.66□□□□□ -0.86
PTPRF-212ENST00000477970 MLST8Q9BVC4 326 aa9.66□□□□□ -0.86
PTPRF-212ENST00000477970 ZNF492Q9P255 531 aa9.66□□□□□ -0.86
PTPRF-212ENST00000477970 CNIH1O95406 144 aa9.66□□□□□ -0.86
PTPRF-212ENST00000477970 IGKV1-17P01599 117 aa9.66□□□□□ -0.86
PTPRF-212ENST00000477970 AMY1AP04745 511 aa9.66□□□□□ -0.86
PTPRF-212ENST00000477970 PKIAP61925 76 aa9.66□□□□□ -0.86
PTPRF-212ENST00000477970 PRB3Q04118 309 aaPredicted RBP9.66□□□□□ -0.86
PTPRF-212ENST00000477970 FXYD3Q14802 87 aa9.66□□□□□ -0.86
PTPRF-212ENST00000477970 CT83Q5H943 113 aa9.66□□□□□ -0.86
PTPRF-212ENST00000477970 TMEM136Q6ZRR5 245 aa9.66□□□□□ -0.86
PTPRF-212ENST00000477970 C19orf35Q6ZS72 473 aa9.66□□□□□ -0.86
PTPRF-212ENST00000477970 SLC25A39Q9BZJ4 359 aaPredicted RBP9.66□□□□□ -0.86
PTPRF-212ENST00000477970 LTAP01374 205 aa9.66□□□□□ -0.86
PTPRF-212ENST00000477970 HIST1H1EP10412 219 aaKnown RBP9.66□□□□□ -0.86
PTPRF-212ENST00000477970 CBLN1P23435 193 aa9.66□□□□□ -0.86
PTPRF-212ENST00000477970 PAFAH1B2P68402 229 aa9.66□□□□□ -0.86
PTPRF-212ENST00000477970 S100A7AQ86SG5 101 aa9.66□□□□□ -0.86
PTPRF-212ENST00000477970 USP9XQ93008 2570 aaPredicted RBP9.65□□□□□ -0.86
PTPRF-212ENST00000477970 IGLV11-55A0A075B6I3 123 aa9.65□□□□□ -0.86
PTPRF-212ENST00000477970 A0A1W2PPR1 153 aa9.65□□□□□ -0.86
PTPRF-212ENST00000477970 WI2-2373I1.2A0A1W2PRP0 233 aa9.65□□□□□ -0.86
PTPRF-212ENST00000477970 H3BRN7 92 aa9.65□□□□□ -0.86
PTPRF-212ENST00000477970 HLA-DQA1P01909 254 aa9.65□□□□□ -0.86
PTPRF-212ENST00000477970 OR10J3Q5JRS4 329 aa9.65□□□□□ -0.86
PTPRF-212ENST00000477970 CDPF1Q6NVV7 123 aa9.65□□□□□ -0.86
PTPRF-212ENST00000477970 LHFPL4Q7Z7J7 247 aa9.65□□□□□ -0.86
PTPRF-212ENST00000477970 LYPD1Q8N2G4 141 aa9.65□□□□□ -0.86
PTPRF-212ENST00000477970 GPR82Q96P67 336 aa9.65□□□□□ -0.86
PTPRF-212ENST00000477970 SHANK2-AS3Q9BTD1 123 aa9.65□□□□□ -0.86
PTPRF-212ENST00000477970 SLC25A5P05141 298 aaKnown RBP9.65□□□□□ -0.86
PTPRF-212ENST00000477970 MGST1P10620 155 aaKnown RBP9.65□□□□□ -0.86
PTPRF-212ENST00000477970 KLRD1Q13241 179 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms