RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 TMEM116Q8NCL8 245 aa8.83□□□□□ -1
LSM2-212ENST00000477182 C4orf3Q8WVX3 66 aa8.83□□□□□ -1
LSM2-212ENST00000477182 ATP5SQ99766 215 aa8.83□□□□□ -1
LSM2-212ENST00000477182 ZNF256Q9Y2P7 627 aaPredicted RBP8.83□□□□□ -1
LSM2-212ENST00000477182 A0A0D9SG52 128 aa8.82□□□□□ -1
LSM2-212ENST00000477182 I3L521 148 aa8.82□□□□□ -1
LSM2-212ENST00000477182 DFFBO76075 338 aa8.82□□□□□ -1
LSM2-212ENST00000477182 OR10J1P30954 320 aa8.82□□□□□ -1
LSM2-212ENST00000477182 ARL3P36405 182 aa8.82□□□□□ -1
LSM2-212ENST00000477182 RUNX1Q01196 453 aa8.82□□□□□ -1
LSM2-212ENST00000477182 VWC2Q2TAL6 325 aa8.82□□□□□ -1
LSM2-212ENST00000477182 TIGITQ495A1 244 aa8.82□□□□□ -1
LSM2-212ENST00000477182 C8orf86Q6ZUL3 223 aa8.82□□□□□ -1
LSM2-212ENST00000477182 TMUB2Q71RG4 321 aa8.82□□□□□ -1
LSM2-212ENST00000477182 TMEM144Q7Z5S9 345 aa8.82□□□□□ -1
LSM2-212ENST00000477182 C9orf62Q8N4C0 152 aa8.82□□□□□ -1
LSM2-212ENST00000477182 THAP8Q8NA92 274 aa8.82□□□□□ -1
LSM2-212ENST00000477182 ATP6V0BQ99437 205 aa8.82□□□□□ -1
LSM2-212ENST00000477182 CHRDL1Q9BU40 450 aa8.82□□□□□ -1
LSM2-212ENST00000477182 ARL6Q9H0F7 186 aa8.82□□□□□ -1
LSM2-212ENST00000477182 NPVFQ9HCQ7 196 aa8.82□□□□□ -1
LSM2-212ENST00000477182 PEF1Q9UBV8 284 aaKnown RBP8.82□□□□□ -1
LSM2-212ENST00000477182 IGKV1D-37A0A075B6S9 117 aa8.81□□□□□ -1
LSM2-212ENST00000477182 IGHV4OR15-8A0A075B7B6 117 aa8.81□□□□□ -1
LSM2-212ENST00000477182 IGKV1OR2-108A0A075B7D4 117 aa8.81□□□□□ -1
LSM2-212ENST00000477182 A0A087WW49 117 aa8.81□□□□□ -1
LSM2-212ENST00000477182 IGHV3-35A0A0C4DH35 117 aa8.81□□□□□ -1
LSM2-212ENST00000477182 ZFP92A6NM28 416 aa8.81□□□□□ -1
LSM2-212ENST00000477182 BMPR1BO00238 502 aa8.81□□□□□ -1
LSM2-212ENST00000477182 NUPL2O15504 423 aaKnown RBP8.81□□□□□ -1
LSM2-212ENST00000477182 TGOLN2O43493 480 aa8.81□□□□□ -1
LSM2-212ENST00000477182 IGKV1-17P01599 117 aa8.81□□□□□ -1
LSM2-212ENST00000477182 HNRNPCP07910 306 aaKnown RBP eCLIP8.81□□□□□ -1
LSM2-212ENST00000477182 CTSGP08311 255 aa8.81□□□□□ -1
LSM2-212ENST00000477182 IGLC1P0CG04 106 aa8.81□□□□□ -1
LSM2-212ENST00000477182 FGF7P21781 194 aa8.81□□□□□ -1
LSM2-212ENST00000477182 ADMP35318 185 aa8.81□□□□□ -1
LSM2-212ENST00000477182 FAM209BQ5JX69 171 aa8.81□□□□□ -1
LSM2-212ENST00000477182 LAMTOR1Q6IAA8 161 aa8.81□□□□□ -1
LSM2-212ENST00000477182 TEPPQ6URK8 271 aa8.81□□□□□ -1
LSM2-212ENST00000477182 DUX3Q96PT4 197 aa8.81□□□□□ -1
LSM2-212ENST00000477182 EDA2RQ9HAV5 297 aa8.81□□□□□ -1
LSM2-212ENST00000477182 WDR83OSQ9Y284 106 aa8.81□□□□□ -1
LSM2-212ENST00000477182 TRAV30A0A087WSZ9 112 aa8.8□□□□□ -1
LSM2-212ENST00000477182 KANTRA0A1W2PQU2 76 aa8.8□□□□□ -1
LSM2-212ENST00000477182 TAAR5O14804 337 aa8.8□□□□□ -1
LSM2-212ENST00000477182 BCL2L11O43521 198 aa8.8□□□□□ -1
LSM2-212ENST00000477182 IFNA5P01569 189 aa8.8□□□□□ -1
LSM2-212ENST00000477182 HSPB1P04792 205 aaKnown RBP8.8□□□□□ -1
LSM2-212ENST00000477182 ZNF90Q03938 601 aa8.8□□□□□ -1
LSM2-212ENST00000477182 RPL7L1Q6DKI1 246 aaKnown RBP8.8□□□□□ -1
LSM2-212ENST00000477182 SPSB3Q6PJ21 355 aa8.8□□□□□ -1
LSM2-212ENST00000477182 BTNL8Q6UX41 500 aa8.8□□□□□ -1
LSM2-212ENST00000477182 RAX2Q96IS3 184 aa8.8□□□□□ -1
LSM2-212ENST00000477182 MGST2Q99735 147 aa8.8□□□□□ -1
LSM2-212ENST00000477182 ARPC5LQ9BPX5 153 aa8.8□□□□□ -1
LSM2-212ENST00000477182 CYTL1Q9NRR1 136 aa8.8□□□□□ -1
LSM2-212ENST00000477182 FRAS1Q86XX4 4008 aa8.8□□□□□ -1
LSM2-212ENST00000477182 SORL1Q92673 2214 aa8.8□□□□□ -1
LSM2-212ENST00000477182 PLECQ15149 4684 aaKnown RBP8.8□□□□□ -1
LSM2-212ENST00000477182 BORCS7-ASMTA0A0B4J1R7 106 aa8.79□□□□□ -1
LSM2-212ENST00000477182 CCL24O00175 119 aa8.79□□□□□ -1
LSM2-212ENST00000477182 GGCTO75223 188 aaKnown RBP8.79□□□□□ -1
LSM2-212ENST00000477182 SCGB2A1O75556 95 aa8.79□□□□□ -1
LSM2-212ENST00000477182 OR2C1O95371 312 aa8.79□□□□□ -1
LSM2-212ENST00000477182 ZNF616Q08AN1 781 aa8.79□□□□□ -1
LSM2-212ENST00000477182 ZNF266Q14584 549 aa8.79□□□□□ -1
LSM2-212ENST00000477182 RPEL1Q2QD12 228 aa8.79□□□□□ -1
LSM2-212ENST00000477182 CYP2G1PQ6ZSU1 146 aa8.79□□□□□ -1
LSM2-212ENST00000477182 OR11H1Q8NG94 326 aa8.79□□□□□ -1
LSM2-212ENST00000477182 OR1N2Q8NGR9 330 aa8.79□□□□□ -1
LSM2-212ENST00000477182 SCGB1C1Q8TD33 95 aa8.79□□□□□ -1
LSM2-212ENST00000477182 ZNF414Q96IQ9 312 aa8.79□□□□□ -1
LSM2-212ENST00000477182 TRGV9Q99603 122 aa8.79□□□□□ -1
LSM2-212ENST00000477182 GGTLC1Q9BX51 225 aa8.79□□□□□ -1
LSM2-212ENST00000477182 WDR61Q9GZS3 305 aaKnown RBP8.79□□□□□ -1
LSM2-212ENST00000477182 BOLA1Q9Y3E2 137 aa8.79□□□□□ -1
LSM2-212ENST00000477182 SEC14L6B5MCN3 397 aa8.78□□□□□ -1
LSM2-212ENST00000477182 LINC01619G3V211 115 aa8.78□□□□□ -1
LSM2-212ENST00000477182 AGPAT2O15120 278 aa8.78□□□□□ -1
LSM2-212ENST00000477182 FRMD6-AS1P0C7T7 363 aa8.78□□□□□ -1
LSM2-212ENST00000477182 GATA2P23769 480 aaPredicted RBP8.78□□□□□ -1
LSM2-212ENST00000477182 CAMLGP49069 296 aa8.78□□□□□ -1
LSM2-212ENST00000477182 SLURP1P55000 103 aa8.78□□□□□ -1
LSM2-212ENST00000477182 YPEL3P61236 119 aaPredicted RBP8.78□□□□□ -1
LSM2-212ENST00000477182 RAB31Q13636 194 aa8.78□□□□□ -1
LSM2-212ENST00000477182 OPCMLQ14982 345 aa8.78□□□□□ -1
LSM2-212ENST00000477182 ZNF600Q6ZNG1 722 aa8.78□□□□□ -1
LSM2-212ENST00000477182 TMEM182Q6ZP80 229 aaPredicted RBP8.78□□□□□ -1
LSM2-212ENST00000477182 HSD17B11Q8NBQ5 300 aa8.78□□□□□ -1
LSM2-212ENST00000477182 RSG1Q9BU20 258 aa8.78□□□□□ -1
LSM2-212ENST00000477182 ZNF471Q9BX82 626 aaPredicted RBP8.78□□□□□ -1
LSM2-212ENST00000477182 PARD6GQ9BYG4 376 aaPredicted RBP8.78□□□□□ -1
LSM2-212ENST00000477182 RFNGQ9Y644 331 aa8.78□□□□□ -1
LSM2-212ENST00000477182 IGHV3OR16-8A0A075B7F1 116 aa8.77□□□□□ -1.01
LSM2-212ENST00000477182 MPDU1O75352 247 aa8.77□□□□□ -1.01
LSM2-212ENST00000477182 YIF1AO95070 293 aa8.77□□□□□ -1.01
LSM2-212ENST00000477182 TOMM40O96008 361 aa8.77□□□□□ -1.01
LSM2-212ENST00000477182 FABP1P07148 127 aa8.77□□□□□ -1.01
LSM2-212ENST00000477182 RD3LP0DJH9 198 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms