RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 LMX1AQ8TE12 382 aa4.81□□□□□ -1.64
SMARCE1-208ENST00000474246 C2orf15Q8WU43 125 aaKnown RBP4.81□□□□□ -1.64
SMARCE1-208ENST00000474246 RTP4Q96DX8 246 aa4.81□□□□□ -1.64
SMARCE1-208ENST00000474246 MYEOVQ96EZ4 313 aa4.81□□□□□ -1.64
SMARCE1-208ENST00000474246 NMNAT3Q96T66 252 aa4.81□□□□□ -1.64
SMARCE1-208ENST00000474246 OVOL2Q9BRP0 275 aa4.81□□□□□ -1.64
SMARCE1-208ENST00000474246 GNB4Q9HAV0 340 aa4.81□□□□□ -1.64
SMARCE1-208ENST00000474246 AK3Q9UIJ7 227 aa4.81□□□□□ -1.64
SMARCE1-208ENST00000474246 PCTPQ9UKL6 214 aa4.81□□□□□ -1.64
SMARCE1-208ENST00000474246 CITO14578 2027 aa4.81□□□□□ -1.64
SMARCE1-208ENST00000474246 EPPK1P58107 5090 aaKnown RBP4.81□□□□□ -1.64
SMARCE1-208ENST00000474246 UNC119BA6NIH7 251 aa4.81□□□□□ -1.64
SMARCE1-208ENST00000474246 RRHO14718 337 aa4.81□□□□□ -1.64
SMARCE1-208ENST00000474246 UQCRQO14949 82 aa4.81□□□□□ -1.64
SMARCE1-208ENST00000474246 IGHG1P01857 330 aa4.81□□□□□ -1.64
SMARCE1-208ENST00000474246 SLC25A1P53007 311 aa4.81□□□□□ -1.64
SMARCE1-208ENST00000474246 ZNF90Q03938 601 aa4.81□□□□□ -1.64
SMARCE1-208ENST00000474246 TMEM187Q14656 261 aa4.81□□□□□ -1.64
SMARCE1-208ENST00000474246 MSMO1Q15800 293 aa4.81□□□□□ -1.64
SMARCE1-208ENST00000474246 SPANXN4Q5MJ08 99 aa4.81□□□□□ -1.64
SMARCE1-208ENST00000474246 SMR3AQ99954 134 aa4.81□□□□□ -1.64
SMARCE1-208ENST00000474246 KCNE5Q9UJ90 142 aa4.81□□□□□ -1.64
SMARCE1-208ENST00000474246 FIS1Q9Y3D6 152 aa4.81□□□□□ -1.64
SMARCE1-208ENST00000474246 CHCHD2Q9Y6H1 151 aaPredicted RBP4.81□□□□□ -1.64
SMARCE1-208ENST00000474246 TRIP11Q15643 1979 aa4.8□□□□□ -1.64
SMARCE1-208ENST00000474246 UBR4Q5T4S7 5183 aa4.8□□□□□ -1.64
SMARCE1-208ENST00000474246 CHD3Q12873 2000 aaKnown RBP4.8□□□□□ -1.64
SMARCE1-208ENST00000474246 TRAV27A0A087WT01 109 aa4.8□□□□□ -1.64
SMARCE1-208ENST00000474246 WI2-2373I1.2A0A1W2PRP0 233 aa4.8□□□□□ -1.64
SMARCE1-208ENST00000474246 FAM220BPB1ANY3 271 aa4.8□□□□□ -1.64
SMARCE1-208ENST00000474246 C11orf98E9PRG8 122 aa4.8□□□□□ -1.64
SMARCE1-208ENST00000474246 TMEM250H0YL14 139 aa4.8□□□□□ -1.64
SMARCE1-208ENST00000474246 YPEL1O60688 119 aa4.8□□□□□ -1.64
SMARCE1-208ENST00000474246 HYPMO75409 117 aa4.8□□□□□ -1.64
SMARCE1-208ENST00000474246 APOMO95445 188 aa4.8□□□□□ -1.64
SMARCE1-208ENST00000474246 H2AFZP0C0S5 128 aa4.8□□□□□ -1.64
SMARCE1-208ENST00000474246 ZNF286BP0CG31 522 aa4.8□□□□□ -1.64
SMARCE1-208ENST00000474246 PPP1CAP62136 330 aa4.8□□□□□ -1.64
SMARCE1-208ENST00000474246 PAPPA-AS1Q5QFB9 102 aa4.8□□□□□ -1.64
SMARCE1-208ENST00000474246 C9orf153Q5TBE3 101 aa4.8□□□□□ -1.64
SMARCE1-208ENST00000474246 Q6ZS92 163 aa4.8□□□□□ -1.64
SMARCE1-208ENST00000474246 ZNF571Q7Z3V5 609 aaPredicted RBP4.8□□□□□ -1.64
SMARCE1-208ENST00000474246 NR2C2APQ86WQ0 139 aa4.8□□□□□ -1.64
SMARCE1-208ENST00000474246 C3orf22Q8N5N4 141 aa4.8□□□□□ -1.64
SMARCE1-208ENST00000474246 OR11H7Q8NGC8 314 aa4.8□□□□□ -1.64
SMARCE1-208ENST00000474246 OR2T35Q8NGX2 323 aa4.8□□□□□ -1.64
SMARCE1-208ENST00000474246 TMEM255BQ8WV15 326 aa4.8□□□□□ -1.64
SMARCE1-208ENST00000474246 SLC25A38Q96DW6 304 aa4.8□□□□□ -1.64
SMARCE1-208ENST00000474246 LINC00526Q96FQ7 95 aa4.8□□□□□ -1.64
SMARCE1-208ENST00000474246 YPEL2Q96QA6 119 aa4.8□□□□□ -1.64
SMARCE1-208ENST00000474246 AICDAQ9GZX7 198 aa4.8□□□□□ -1.64
SMARCE1-208ENST00000474246 CKAP5Q14008 2032 aa4.8□□□□□ -1.64
SMARCE1-208ENST00000474246 BAZ2AQ9UIF9 1905 aaKnown RBP4.8□□□□□ -1.64
SMARCE1-208ENST00000474246 IZUMO1RA6ND01 250 aa4.79□□□□□ -1.64
SMARCE1-208ENST00000474246 PAX4O43316 350 aa4.79□□□□□ -1.64
SMARCE1-208ENST00000474246 NGFP01138 241 aa4.79□□□□□ -1.64
SMARCE1-208ENST00000474246 CECR9P0C854 216 aa4.79□□□□□ -1.64
SMARCE1-208ENST00000474246 KRTAP10-9P60411 292 aa4.79□□□□□ -1.64
SMARCE1-208ENST00000474246 PNOCQ13519 176 aa4.79□□□□□ -1.64
SMARCE1-208ENST00000474246 ZNF718Q3SXZ3 478 aa4.79□□□□□ -1.64
SMARCE1-208ENST00000474246 AADACL3Q5VUY0 350 aa4.79□□□□□ -1.64
SMARCE1-208ENST00000474246 ACP7Q6ZNF0 438 aa4.79□□□□□ -1.64
SMARCE1-208ENST00000474246 OTOSQ8NHW6 89 aa4.79□□□□□ -1.64
SMARCE1-208ENST00000474246 RPS4Y2Q8TD47 263 aa4.79□□□□□ -1.64
SMARCE1-208ENST00000474246 MAL2Q969L2 176 aa4.79□□□□□ -1.64
SMARCE1-208ENST00000474246 NEURL3Q96EH8 262 aa4.79□□□□□ -1.64
SMARCE1-208ENST00000474246 GPX7Q96SL4 187 aaPredicted RBP4.79□□□□□ -1.64
SMARCE1-208ENST00000474246 COMMD5Q9GZQ3 224 aa4.79□□□□□ -1.64
SMARCE1-208ENST00000474246 PARLQ9H300 379 aa4.79□□□□□ -1.64
SMARCE1-208ENST00000474246 LIME1Q9H400 295 aa4.79□□□□□ -1.64
SMARCE1-208ENST00000474246 MARCOQ9UEW3 520 aaPredicted RBP4.79□□□□□ -1.64
SMARCE1-208ENST00000474246 PLA2G2DQ9UNK4 145 aa4.79□□□□□ -1.64
SMARCE1-208ENST00000474246 NCKAP5O14513 1909 aa4.79□□□□□ -1.64
SMARCE1-208ENST00000474246 TRAV8-6A0A0B4J262 113 aa4.79□□□□□ -1.64
SMARCE1-208ENST00000474246 H3BP45 60 aa4.79□□□□□ -1.64
SMARCE1-208ENST00000474246 NDUFS7O75251 213 aa4.79□□□□□ -1.64
SMARCE1-208ENST00000474246 SLC25A6P12236 298 aa4.79□□□□□ -1.64
SMARCE1-208ENST00000474246 VDAC2P45880 294 aaPredicted RBP4.79□□□□□ -1.64
SMARCE1-208ENST00000474246 GFERP55789 205 aa4.79□□□□□ -1.64
SMARCE1-208ENST00000474246 RPS11P62280 158 aaKnown RBP eCLIP4.79□□□□□ -1.64
SMARCE1-208ENST00000474246 SEC11AP67812 179 aa4.79□□□□□ -1.64
SMARCE1-208ENST00000474246 ATP5G2Q06055 141 aa4.79□□□□□ -1.64
SMARCE1-208ENST00000474246 OR10AC1Q8NH08 325 aa4.79□□□□□ -1.64
SMARCE1-208ENST00000474246 NAA60Q9H7X0 242 aa4.79□□□□□ -1.64
SMARCE1-208ENST00000474246 ST20Q9HBF5 79 aa4.79□□□□□ -1.64
SMARCE1-208ENST00000474246 OTORQ9NRC9 128 aa4.79□□□□□ -1.64
SMARCE1-208ENST00000474246 C21orf62Q9NYP8 219 aa4.79□□□□□ -1.64
SMARCE1-208ENST00000474246 OR5V1Q9UGF6 321 aa4.79□□□□□ -1.64
SMARCE1-208ENST00000474246 HYDINQ4G0P3 5121 aa4.79□□□□□ -1.64
SMARCE1-208ENST00000474246 C9orf118A6NHY6 69 aa4.78□□□□□ -1.64
SMARCE1-208ENST00000474246 LY6G6DO95868 133 aa4.78□□□□□ -1.64
SMARCE1-208ENST00000474246 SFTA3P0C7M3 94 aa4.78□□□□□ -1.64
SMARCE1-208ENST00000474246 POLR2IP36954 125 aaKnown RBP4.78□□□□□ -1.64
SMARCE1-208ENST00000474246 POLR2JP52435 117 aaKnown RBP4.78□□□□□ -1.64
SMARCE1-208ENST00000474246 SEC61BP60468 96 aaKnown RBP4.78□□□□□ -1.64
SMARCE1-208ENST00000474246 CLEC20AQ6ZU45 233 aa4.78□□□□□ -1.64
SMARCE1-208ENST00000474246 C10orf111Q8N326 155 aa4.78□□□□□ -1.64
SMARCE1-208ENST00000474246 RAB37Q96AX2 223 aa4.78□□□□□ -1.64
SMARCE1-208ENST00000474246 MUCL1Q96DR8 90 aa4.78□□□□□ -1.64
SMARCE1-208ENST00000474246 AQP10Q96PS8 301 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms