RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 TMEM268Q5VZI3 342 aa4.33□□□□□ -1.72
VARS-222ENST00000470953 SPSB3Q6PJ21 355 aa4.33□□□□□ -1.72
VARS-222ENST00000470953 LHFPL1Q86WI0 220 aa4.33□□□□□ -1.72
VARS-222ENST00000470953 GPHB5Q86YW7 130 aa4.33□□□□□ -1.72
VARS-222ENST00000470953 FAM219AQ8IW50 185 aa4.33□□□□□ -1.72
VARS-222ENST00000470953 TOMM5Q8N4H5 51 aa4.33□□□□□ -1.72
VARS-222ENST00000470953 OR52B4Q8NGK2 314 aa4.33□□□□□ -1.72
VARS-222ENST00000470953 OR1P1Q8NH06 330 aa4.33□□□□□ -1.72
VARS-222ENST00000470953 ZNF502Q8TBZ5 544 aa4.33□□□□□ -1.72
VARS-222ENST00000470953 DTD1Q8TEA8 209 aa4.33□□□□□ -1.72
VARS-222ENST00000470953 RBPMSQ93062 196 aaKnown RBP4.33□□□□□ -1.72
VARS-222ENST00000470953 WDR89Q96FK6 387 aaPredicted RBP4.33□□□□□ -1.72
VARS-222ENST00000470953 SEC22AQ96IW7 307 aa4.33□□□□□ -1.72
VARS-222ENST00000470953 ST6GAL2Q96JF0 529 aa4.33□□□□□ -1.72
VARS-222ENST00000470953 SLIRPQ9GZT3 109 aaKnown RBP4.33□□□□□ -1.72
VARS-222ENST00000470953 TREM1Q9NP99 234 aa4.33□□□□□ -1.72
VARS-222ENST00000470953 DAZ1Q9NQZ3 744 aaKnown RBP4.33□□□□□ -1.72
VARS-222ENST00000470953 KCNIP3Q9Y2W7 256 aa4.33□□□□□ -1.72
VARS-222ENST00000470953 SELENOKQ9Y6D0 94 aa4.33□□□□□ -1.72
VARS-222ENST00000470953 TNXBP22105 4242 aa4.32□□□□□ -1.72
VARS-222ENST00000470953 IGHV3OR16-8A0A075B7F1 116 aa4.32□□□□□ -1.72
VARS-222ENST00000470953 RPS10-NUDT3A0A1W2PQS6 291 aa4.32□□□□□ -1.72
VARS-222ENST00000470953 ANKRD20A5PA0PJZ0 165 aa4.32□□□□□ -1.72
VARS-222ENST00000470953 TMEM213A2RRL7 107 aa4.32□□□□□ -1.72
VARS-222ENST00000470953 XKRY2A2RUG3 117 aa4.32□□□□□ -1.72
VARS-222ENST00000470953 ZNF785A8K8V0 405 aa4.32□□□□□ -1.72
VARS-222ENST00000470953 KRTAP9-7A8MTY7 169 aa4.32□□□□□ -1.72
VARS-222ENST00000470953 A8MWP6 167 aa4.32□□□□□ -1.72
VARS-222ENST00000470953 NDUFA4O00483 81 aa4.32□□□□□ -1.72
VARS-222ENST00000470953 TCAPO15273 167 aa4.32□□□□□ -1.72
VARS-222ENST00000470953 ZNF207O43670 478 aaKnown RBP4.32□□□□□ -1.72
VARS-222ENST00000470953 GSTZ1O43708 216 aaPredicted RBP4.32□□□□□ -1.72
VARS-222ENST00000470953 NXPH3O95157 252 aa4.32□□□□□ -1.72
VARS-222ENST00000470953 MT-CO2P00403 227 aa4.32□□□□□ -1.72
VARS-222ENST00000470953 IGKV1-39P01597 117 aa4.32□□□□□ -1.72
VARS-222ENST00000470953 IGKV1-5P01602 117 aa4.32□□□□□ -1.72
VARS-222ENST00000470953 IGHV3-48P01763 117 aa4.32□□□□□ -1.72
VARS-222ENST00000470953 C1QBP02746 253 aa4.32□□□□□ -1.72
VARS-222ENST00000470953 IGKV1D-39P04432 117 aa4.32□□□□□ -1.72
VARS-222ENST00000470953 AKR1C4P17516 323 aa4.32□□□□□ -1.72
VARS-222ENST00000470953 CBLN1P23435 193 aa4.32□□□□□ -1.72
VARS-222ENST00000470953 UCP1P25874 307 aa4.32□□□□□ -1.72
VARS-222ENST00000470953 TNFSF8P32971 234 aa4.32□□□□□ -1.72
VARS-222ENST00000470953 RPL35P42766 123 aaKnown RBP4.32□□□□□ -1.72
VARS-222ENST00000470953 NPBWR1P48145 328 aa4.32□□□□□ -1.72
VARS-222ENST00000470953 MFAP4P55083 255 aa4.32□□□□□ -1.72
VARS-222ENST00000470953 NANOS2P60321 138 aaKnown RBP4.32□□□□□ -1.72
VARS-222ENST00000470953 FGL1Q08830 312 aa4.32□□□□□ -1.72
VARS-222ENST00000470953 TM4SF20Q53R12 229 aa4.32□□□□□ -1.72
VARS-222ENST00000470953 LELP1Q5T871 98 aa4.32□□□□□ -1.72
VARS-222ENST00000470953 LAMTOR1Q6IAA8 161 aa4.32□□□□□ -1.72
VARS-222ENST00000470953 LYPD1Q8N2G4 141 aa4.32□□□□□ -1.72
VARS-222ENST00000470953 OR2C3Q8N628 320 aa4.32□□□□□ -1.72
VARS-222ENST00000470953 UXS1Q8NBZ7 420 aa4.32□□□□□ -1.72
VARS-222ENST00000470953 DUSP18Q8NEJ0 188 aa4.32□□□□□ -1.72
VARS-222ENST00000470953 SCARB1Q8WTV0 552 aa4.32□□□□□ -1.72
VARS-222ENST00000470953 TMEM190Q8WZ59 177 aa4.32□□□□□ -1.72
VARS-222ENST00000470953 NARS2Q96I59 477 aaKnown RBP4.32□□□□□ -1.72
VARS-222ENST00000470953 GINS3Q9BRX5 216 aa4.32□□□□□ -1.72
VARS-222ENST00000470953 TMEM222Q9H0R3 208 aa4.32□□□□□ -1.72
VARS-222ENST00000470953 SEPSECSQ9HD40 501 aaKnown RBP4.32□□□□□ -1.72
VARS-222ENST00000470953 HEYLQ9NQ87 328 aaPredicted RBP4.32□□□□□ -1.72
VARS-222ENST00000470953 CACNG5Q9UF02 275 aa4.32□□□□□ -1.72
VARS-222ENST00000470953 CACFD1Q9UGQ2 172 aa4.32□□□□□ -1.72
VARS-222ENST00000470953 CRYM-AS1A6NIL9 109 aa4.31□□□□□ -1.72
VARS-222ENST00000470953 OR11H12B2RN74 326 aa4.31□□□□□ -1.72
VARS-222ENST00000470953 H0Y8G0 127 aa4.31□□□□□ -1.72
VARS-222ENST00000470953 K7EIM0 57 aa4.31□□□□□ -1.72
VARS-222ENST00000470953 SULT1A3P0DMM9 295 aa4.31□□□□□ -1.72
VARS-222ENST00000470953 SULT1A4P0DMN0 295 aa4.31□□□□□ -1.72
VARS-222ENST00000470953 ETV6P41212 452 aa4.31□□□□□ -1.72
VARS-222ENST00000470953 ELLP55199 621 aaPredicted RBP4.31□□□□□ -1.72
VARS-222ENST00000470953 RPL11P62913 178 aaKnown RBP4.31□□□□□ -1.72
VARS-222ENST00000470953 VAMP2P63027 116 aa4.31□□□□□ -1.72
VARS-222ENST00000470953 TNP2Q05952 138 aa4.31□□□□□ -1.72
VARS-222ENST00000470953 DEFB114Q30KQ6 69 aa4.31□□□□□ -1.72
VARS-222ENST00000470953 UNQ9165/PRO28630Q6UXU0 137 aa4.31□□□□□ -1.72
VARS-222ENST00000470953 SMIM15Q7Z3B0 74 aa4.31□□□□□ -1.72
VARS-222ENST00000470953 WFDC3Q8IUB2 231 aa4.31□□□□□ -1.72
VARS-222ENST00000470953 TMEM61Q8N0U2 210 aa4.31□□□□□ -1.72
VARS-222ENST00000470953 LGI3Q8N145 548 aa4.31□□□□□ -1.72
VARS-222ENST00000470953 ZNF114Q8NC26 417 aa4.31□□□□□ -1.72
VARS-222ENST00000470953 OR1S1Q8NH92 325 aa4.31□□□□□ -1.72
VARS-222ENST00000470953 SFT2D1Q8WV19 159 aa4.31□□□□□ -1.72
VARS-222ENST00000470953 ST8SIA2Q92186 375 aa4.31□□□□□ -1.72
VARS-222ENST00000470953 ATP6V0BQ99437 205 aa4.31□□□□□ -1.72
VARS-222ENST00000470953 C5orf66Q9H5L9 145 aa4.31□□□□□ -1.72
VARS-222ENST00000470953 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.31□□□□□ -1.72
VARS-222ENST00000470953 MRPL27Q9P0M9 148 aaKnown RBP4.31□□□□□ -1.72
VARS-222ENST00000470953 PUS1Q9Y606 427 aaKnown RBP eCLIP4.31□□□□□ -1.72
VARS-222ENST00000470953 IGKV3-7A0A075B6H7 116 aa4.3□□□□□ -1.72
VARS-222ENST00000470953 IGHV3-49A0A0A0MS15 119 aa4.3□□□□□ -1.72
VARS-222ENST00000470953 TRAV25A0A0B4J276 109 aa4.3□□□□□ -1.72
VARS-222ENST00000470953 A0A1B0GV90 55 aa4.3□□□□□ -1.72
VARS-222ENST00000470953 A0A1W2PPQ1 181 aa4.3□□□□□ -1.72
VARS-222ENST00000470953 OR4C46A6NHA9 309 aa4.3□□□□□ -1.72
VARS-222ENST00000470953 C15orf62A8K5M9 175 aa4.3□□□□□ -1.72
VARS-222ENST00000470953 SCO1O75880 301 aa4.3□□□□□ -1.72
VARS-222ENST00000470953 GAS8-AS1O95177 125 aa4.3□□□□□ -1.72
VARS-222ENST00000470953 CDS2O95674 445 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 175.7 ms