RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 PRDX2P32119 198 aa7.77□□□□□ -1.17
HDAC3-205ENST00000469550 MPV17P39210 176 aa7.77□□□□□ -1.17
HDAC3-205ENST00000469550 LOXL3P58215 753 aa7.77□□□□□ -1.17
HDAC3-205ENST00000469550 MAJINQ3KP22 176 aa7.77□□□□□ -1.17
HDAC3-205ENST00000469550 CD177Q8N6Q3 437 aa7.77□□□□□ -1.17
HDAC3-205ENST00000469550 OR4C5Q8NGB2 326 aa7.77□□□□□ -1.17
HDAC3-205ENST00000469550 PPP1R35Q8TAP8 253 aa7.77□□□□□ -1.17
HDAC3-205ENST00000469550 SLC25A33Q9BSK2 321 aa7.77□□□□□ -1.17
HDAC3-205ENST00000469550 TNFRSF19Q9NS68 423 aa7.77□□□□□ -1.17
HDAC3-205ENST00000469550 PRNDQ9UKY0 176 aa7.77□□□□□ -1.17
HDAC3-205ENST00000469550 NSD1Q96L73 2696 aaPredicted RBP7.76□□□□□ -1.17
HDAC3-205ENST00000469550 MGST3O14880 152 aa7.76□□□□□ -1.17
HDAC3-205ENST00000469550 OR7C2O60412 319 aa7.76□□□□□ -1.17
HDAC3-205ENST00000469550 MZT1Q08AG7 82 aa7.76□□□□□ -1.17
HDAC3-205ENST00000469550 GUSBP1Q15486 140 aa7.76□□□□□ -1.17
HDAC3-205ENST00000469550 RPL39P5Q59GN2 51 aa7.76□□□□□ -1.17
HDAC3-205ENST00000469550 OR4A47Q6IF82 309 aa7.76□□□□□ -1.17
HDAC3-205ENST00000469550 ATOH7Q8N100 152 aa7.76□□□□□ -1.17
HDAC3-205ENST00000469550 ZNF596Q8TC21 504 aa7.76□□□□□ -1.17
HDAC3-205ENST00000469550 ADTRPQ96IZ2 230 aa7.76□□□□□ -1.17
HDAC3-205ENST00000469550 DCTN5Q9BTE1 182 aa7.76□□□□□ -1.17
HDAC3-205ENST00000469550 TMEM70Q9BUB7 260 aa7.76□□□□□ -1.17
HDAC3-205ENST00000469550 IDI2-AS1Q9NZ38 188 aa7.76□□□□□ -1.17
HDAC3-205ENST00000469550 J3QR06 171 aa7.75□□□□□ -1.17
HDAC3-205ENST00000469550 LOXP28300 417 aaPredicted RBP7.75□□□□□ -1.17
HDAC3-205ENST00000469550 KIR2DL2P43627 348 aaPredicted RBP7.75□□□□□ -1.17
HDAC3-205ENST00000469550 ZNF134P52741 427 aa7.75□□□□□ -1.17
HDAC3-205ENST00000469550 MFAP2P55001 183 aa7.75□□□□□ -1.17
HDAC3-205ENST00000469550 PRCDQ00LT1 54 aa7.75□□□□□ -1.17
HDAC3-205ENST00000469550 C2orf83Q53S99 150 aa7.75□□□□□ -1.17
HDAC3-205ENST00000469550 Q56UQ5 140 aa7.75□□□□□ -1.17
HDAC3-205ENST00000469550 Q5PR19 223 aa7.75□□□□□ -1.17
HDAC3-205ENST00000469550 GDF5OSQ5U4N7 250 aa7.75□□□□□ -1.17
HDAC3-205ENST00000469550 NUP35Q8NFH5 326 aa7.75□□□□□ -1.17
HDAC3-205ENST00000469550 IGFBPL1Q8WX77 278 aa7.75□□□□□ -1.17
HDAC3-205ENST00000469550 SMIM12Q96EX1 92 aa7.75□□□□□ -1.17
HDAC3-205ENST00000469550 SMR3AQ99954 134 aa7.75□□□□□ -1.17
HDAC3-205ENST00000469550 GCM1Q9NP62 436 aa7.75□□□□□ -1.17
HDAC3-205ENST00000469550 RAB9BQ9NP90 201 aa7.75□□□□□ -1.17
HDAC3-205ENST00000469550 A0A1B0GXF2 115 aa7.75□□□□□ -1.17
HDAC3-205ENST00000469550 CGB3P0DN86 165 aa7.75□□□□□ -1.17
HDAC3-205ENST00000469550 CGB7P0DN87 165 aa7.75□□□□□ -1.17
HDAC3-205ENST00000469550 HIST1H1EP10412 219 aaKnown RBP7.75□□□□□ -1.17
HDAC3-205ENST00000469550 FAM27E3Q08E93 113 aa7.75□□□□□ -1.17
HDAC3-205ENST00000469550 LTC4SQ16873 150 aa7.75□□□□□ -1.17
HDAC3-205ENST00000469550 ZNF474Q6S9Z5 364 aaPredicted RBP7.75□□□□□ -1.17
HDAC3-205ENST00000469550 OR1L8Q8NGR8 309 aa7.75□□□□□ -1.17
HDAC3-205ENST00000469550 FAM168AQ92567 244 aa7.75□□□□□ -1.17
HDAC3-205ENST00000469550 CHCHD1Q96BP2 118 aaKnown RBP7.75□□□□□ -1.17
HDAC3-205ENST00000469550 FAM167A-AS1Q96KT0 104 aa7.75□□□□□ -1.17
HDAC3-205ENST00000469550 OR51B2Q9Y5P1 312 aa7.75□□□□□ -1.17
HDAC3-205ENST00000469550 IGKV1OR2-108A0A075B7D4 117 aa7.74□□□□□ -1.17
HDAC3-205ENST00000469550 PSMB11A5LHX3 300 aa7.74□□□□□ -1.17
HDAC3-205ENST00000469550 TFF1P04155 84 aa7.74□□□□□ -1.17
HDAC3-205ENST00000469550 IGHV1-2P23083 117 aa7.74□□□□□ -1.17
HDAC3-205ENST00000469550 CFHR2P36980 270 aa7.74□□□□□ -1.17
HDAC3-205ENST00000469550 EDDM3AQ14507 147 aa7.74□□□□□ -1.17
HDAC3-205ENST00000469550 VAMP3Q15836 100 aa7.74□□□□□ -1.17
HDAC3-205ENST00000469550 C12orf54Q6X4T0 127 aa7.74□□□□□ -1.17
HDAC3-205ENST00000469550 Q6ZVH6 145 aa7.74□□□□□ -1.17
HDAC3-205ENST00000469550 NUDT10Q8NFP7 164 aa7.74□□□□□ -1.17
HDAC3-205ENST00000469550 CACNG8Q8WXS5 425 aa7.74□□□□□ -1.17
HDAC3-205ENST00000469550 NUDT11Q96G61 164 aa7.74□□□□□ -1.17
HDAC3-205ENST00000469550 ZNF714Q96N38 554 aa7.74□□□□□ -1.17
HDAC3-205ENST00000469550 FAM234AQ9H0X4 552 aa7.74□□□□□ -1.17
HDAC3-205ENST00000469550 DUSP13Q9UII6 198 aa7.74□□□□□ -1.17
HDAC3-205ENST00000469550 AMMECR1Q9Y4X0 333 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-205ENST00000469550 SOX21Q9Y651 276 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-205ENST00000469550 TET2Q6N021 2002 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-205ENST00000469550 MAP1AP78559 2803 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-205ENST00000469550 FN1P02751 2386 aaKnown RBP7.74□□□□□ -1.17
HDAC3-205ENST00000469550 SRRM5B3KS81 715 aa7.73□□□□□ -1.17
HDAC3-205ENST00000469550 C16orf97H3BN30 126 aa7.73□□□□□ -1.17
HDAC3-205ENST00000469550 UPK2O00526 184 aa7.73□□□□□ -1.17
HDAC3-205ENST00000469550 TAX1BP3O14907 124 aa7.73□□□□□ -1.17
HDAC3-205ENST00000469550 LY6G6DO95868 133 aa7.73□□□□□ -1.17
HDAC3-205ENST00000469550 CA1P00915 261 aaPredicted RBP7.73□□□□□ -1.17
HDAC3-205ENST00000469550 IGKV3-15P01624 115 aa7.73□□□□□ -1.17
HDAC3-205ENST00000469550 HLA-DRB1P01911 266 aa7.73□□□□□ -1.17
HDAC3-205ENST00000469550 COL8A2P25067 703 aa7.73□□□□□ -1.17
HDAC3-205ENST00000469550 RNASEKQ6P5S7 137 aaKnown RBP7.73□□□□□ -1.17
HDAC3-205ENST00000469550 SMIM15Q7Z3B0 74 aa7.73□□□□□ -1.17
HDAC3-205ENST00000469550 DEFB125Q8N687 156 aa7.73□□□□□ -1.17
HDAC3-205ENST00000469550 NHLRC2Q8NBF2 726 aa7.73□□□□□ -1.17
HDAC3-205ENST00000469550 LRRC29Q8WV35 223 aa7.73□□□□□ -1.17
HDAC3-205ENST00000469550 C7orf69Q9H7B7 122 aa7.73□□□□□ -1.17
HDAC3-205ENST00000469550 ZNF355PQ9NSJ1 428 aa7.73□□□□□ -1.17
HDAC3-205ENST00000469550 DSCAMO60469 2012 aa7.73□□□□□ -1.17
HDAC3-205ENST00000469550 OR4C46A6NHA9 309 aa7.73□□□□□ -1.17
HDAC3-205ENST00000469550 TIMM8AO60220 97 aaPredicted RBP7.73□□□□□ -1.17
HDAC3-205ENST00000469550 OR5AL1P0C617 328 aa7.73□□□□□ -1.17
HDAC3-205ENST00000469550 RPL8P62917 257 aaKnown RBP7.73□□□□□ -1.17
HDAC3-205ENST00000469550 CD69Q07108 199 aa7.73□□□□□ -1.17
HDAC3-205ENST00000469550 FAM120AOSQ5T036 256 aa7.73□□□□□ -1.17
HDAC3-205ENST00000469550 C1orf229Q6ZS94 237 aaPredicted RBP7.73□□□□□ -1.17
HDAC3-205ENST00000469550 GCSAMQ8N6F7 178 aa7.73□□□□□ -1.17
HDAC3-205ENST00000469550 CNEP1R1Q8N9A8 125 aa7.73□□□□□ -1.17
HDAC3-205ENST00000469550 URB1-AS1Q96HZ7 61 aa7.73□□□□□ -1.17
HDAC3-205ENST00000469550 CCL19Q99731 98 aa7.73□□□□□ -1.17
HDAC3-205ENST00000469550 SSBP3Q9BWW4 388 aaPredicted RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms