RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 GALR1P47211 349 aa14.45□□□□□ -0.1
COL9A3-205ENST00000466192 CX3CL1P78423 397 aa14.45□□□□□ -0.1
COL9A3-205ENST00000466192 NDPQ00604 133 aa14.45□□□□□ -0.1
COL9A3-205ENST00000466192 CDPF1Q6NVV7 123 aa14.45□□□□□ -0.1
COL9A3-205ENST00000466192 ZNF562Q6V9R5 426 aa14.45□□□□□ -0.1
COL9A3-205ENST00000466192 ANAPC16Q96DE5 110 aa14.45□□□□□ -0.1
COL9A3-205ENST00000466192 ELOVL1Q9BW60 279 aa14.45□□□□□ -0.1
COL9A3-205ENST00000466192 I3L2K1 104 aa14.44□□□□□ -0.1
COL9A3-205ENST00000466192 PFN1P07737 140 aaKnown RBP14.44□□□□□ -0.1
COL9A3-205ENST00000466192 FAM106CPP0CH98 169 aa14.44□□□□□ -0.1
COL9A3-205ENST00000466192 OR5B12Q96R08 314 aa14.44□□□□□ -0.1
COL9A3-205ENST00000466192 ARL2-SNX15V9GYD0 113 aa14.44□□□□□ -0.1
COL9A3-205ENST00000466192 POLQO75417 2590 aa14.44□□□□□ -0.1
COL9A3-205ENST00000466192 TRBV24-1A0A075B6N3 115 aa14.44□□□□□ -0.1
COL9A3-205ENST00000466192 NDUFA6P56556 154 aa14.44□□□□□ -0.1
COL9A3-205ENST00000466192 UBE2L3P68036 154 aaKnown RBP14.44□□□□□ -0.1
COL9A3-205ENST00000466192 CLEC12BQ2HXU8 276 aa14.44□□□□□ -0.1
COL9A3-205ENST00000466192 ASPHD1Q5U4P2 390 aa14.44□□□□□ -0.1
COL9A3-205ENST00000466192 LINC00305Q7Z4B0 112 aa14.44□□□□□ -0.1
COL9A3-205ENST00000466192 OR1B1Q8NGR6 318 aa14.44□□□□□ -0.1
COL9A3-205ENST00000466192 TRGV9Q99603 122 aa14.44□□□□□ -0.1
COL9A3-205ENST00000466192 IGHV3OR16-10A0A075B7F0 116 aa14.43□□□□□ -0.1
COL9A3-205ENST00000466192 GGTLC3B5MD39 225 aa14.43□□□□□ -0.1
COL9A3-205ENST00000466192 TRGC2P03986 189 aa14.43□□□□□ -0.1
COL9A3-205ENST00000466192 PYYP10082 97 aa14.43□□□□□ -0.1
COL9A3-205ENST00000466192 PAX1P15863 534 aa14.43□□□□□ -0.1
COL9A3-205ENST00000466192 Q8N9W7 124 aa14.43□□□□□ -0.1
COL9A3-205ENST00000466192 ARPC1AQ92747 370 aa14.43□□□□□ -0.1
COL9A3-205ENST00000466192 C11orf52Q96A22 123 aa14.43□□□□□ -0.1
COL9A3-205ENST00000466192 CRYBB3P26998 211 aa14.43□□□□□ -0.1
COL9A3-205ENST00000466192 BRS3P32247 399 aa14.43□□□□□ -0.1
COL9A3-205ENST00000466192 SUMO1P63165 101 aaKnown RBP14.43□□□□□ -0.1
COL9A3-205ENST00000466192 OCC1Q8TAD7 63 aa14.43□□□□□ -0.1
COL9A3-205ENST00000466192 USP9YO00507 2555 aaPredicted RBP14.43□□□□□ -0.1
COL9A3-205ENST00000466192 KLF17Q5JT82 389 aaPredicted RBP14.42□□□□□ -0.1
COL9A3-205ENST00000466192 REC114Q7Z4M0 266 aa14.42□□□□□ -0.1
COL9A3-205ENST00000466192 CHD6Q8TD26 2715 aa14.42□□□□□ -0.1
COL9A3-205ENST00000466192 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.42□□□□□ -0.12e-10■■□□□ 12.3
COL9A3-205ENST00000466192 ELOA3CA0A087WX78 387 aaPredicted RBP14.41□□□□□ -0.1
COL9A3-205ENST00000466192 A0A1B0GV90 55 aa14.41□□□□□ -0.1
COL9A3-205ENST00000466192 K7EIM0 57 aa14.41□□□□□ -0.1
COL9A3-205ENST00000466192 PAXXQ9BUH6 204 aa14.41□□□□□ -0.1
COL9A3-205ENST00000466192 PTPN13Q12923 2485 aa14.41□□□□□ -0.1
COL9A3-205ENST00000466192 IGHV1-69DA0A0B4J2H0 117 aa14.41□□□□□ -0.1
COL9A3-205ENST00000466192 A0A1W2PRE2 83 aa14.41□□□□□ -0.1
COL9A3-205ENST00000466192 IGHV1-69P01742 117 aa14.41□□□□□ -0.1
COL9A3-205ENST00000466192 SNRPCP09234 159 aaKnown RBP14.41□□□□□ -0.1
COL9A3-205ENST00000466192 OR10D4PQ8NGN7 298 aa14.41□□□□□ -0.1
COL9A3-205ENST00000466192 SFRP2Q96HF1 295 aa14.41□□□□□ -0.1
COL9A3-205ENST00000466192 IGHV7-81A0A0B4J1V7 117 aa14.4□□□□□ -0.1
COL9A3-205ENST00000466192 TRAV40A0A0B4J280 105 aa14.4□□□□□ -0.1
COL9A3-205ENST00000466192 A0A1W2PPQ1 181 aa14.4□□□□□ -0.1
COL9A3-205ENST00000466192 COL8A1P27658 744 aa14.4□□□□□ -0.1
COL9A3-205ENST00000466192 ZNF124Q15973 351 aa14.4□□□□□ -0.1
COL9A3-205ENST00000466192 C1RLQ9NZP8 487 aa14.4□□□□□ -0.1
COL9A3-205ENST00000466192 NPIPB5A8MRT5 1133 aa14.4□□□□□ -0.1
COL9A3-205ENST00000466192 MSMBP08118 114 aa14.4□□□□□ -0.1
COL9A3-205ENST00000466192 IGLC1P0CG04 106 aa14.4□□□□□ -0.1
COL9A3-205ENST00000466192 DSCR9P59020 149 aa14.4□□□□□ -0.1
COL9A3-205ENST00000466192 BRD3OSQ6XYD6 125 aa14.4□□□□□ -0.1
COL9A3-205ENST00000466192 MDFIC2A0A1B0GVS7 189 aa14.39□□□□□ -0.11
COL9A3-205ENST00000466192 HELTA6NFD8 242 aa14.39□□□□□ -0.11
COL9A3-205ENST00000466192 K7EN84 100 aa14.39□□□□□ -0.11
COL9A3-205ENST00000466192 HIST1H2BKO60814 126 aa14.39□□□□□ -0.11
COL9A3-205ENST00000466192 HIST1H2BJP06899 126 aa14.39□□□□□ -0.11
COL9A3-205ENST00000466192 EGR2P11161 476 aaPredicted RBP14.39□□□□□ -0.11
COL9A3-205ENST00000466192 CD99P14209 185 aa14.39□□□□□ -0.11
COL9A3-205ENST00000466192 HIST1H2BOP23527 126 aa14.39□□□□□ -0.11
COL9A3-205ENST00000466192 HIST1H2BBP33778 126 aa14.39□□□□□ -0.11
COL9A3-205ENST00000466192 HIST1H2BDP58876 126 aa14.39□□□□□ -0.11
COL9A3-205ENST00000466192 TAS2R60P59551 318 aa14.39□□□□□ -0.11
COL9A3-205ENST00000466192 PKIAP61925 76 aa14.39□□□□□ -0.11
COL9A3-205ENST00000466192 HIST1H2BCP62807 126 aa14.39□□□□□ -0.11
COL9A3-205ENST00000466192 HIST2H2BEQ16778 126 aa14.39□□□□□ -0.11
COL9A3-205ENST00000466192 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.39□□□□□ -0.11
COL9A3-205ENST00000466192 OR1L6Q8NGR2 347 aa14.39□□□□□ -0.11
COL9A3-205ENST00000466192 HIST1H2BHQ93079 126 aa14.39□□□□□ -0.11
COL9A3-205ENST00000466192 HIST1H2BNQ99877 126 aa14.39□□□□□ -0.11
COL9A3-205ENST00000466192 HIST1H2BMQ99879 126 aa14.39□□□□□ -0.11
COL9A3-205ENST00000466192 TGOLN2O43493 480 aa14.39□□□□□ -0.11
COL9A3-205ENST00000466192 HYPMO75409 117 aa14.39□□□□□ -0.11
COL9A3-205ENST00000466192 HLA-DRB1P01911 266 aa14.39□□□□□ -0.11
COL9A3-205ENST00000466192 PSG1P11464 419 aa14.39□□□□□ -0.11
COL9A3-205ENST00000466192 HIST3H2BBQ8N257 126 aa14.39□□□□□ -0.11
COL9A3-205ENST00000466192 TTC9CQ8N5M4 171 aa14.39□□□□□ -0.11
COL9A3-205ENST00000466192 FANCD2OSQ96PS1 177 aa14.39□□□□□ -0.11
COL9A3-205ENST00000466192 HSPB9Q9BQS6 159 aa14.39□□□□□ -0.11
COL9A3-205ENST00000466192 PYGO2Q9BRQ0 406 aa14.39□□□□□ -0.11
COL9A3-205ENST00000466192 C9JCJ5 164 aa14.38□□□□□ -0.11
COL9A3-205ENST00000466192 PPP1R2P9O14990 202 aa14.38□□□□□ -0.11
COL9A3-205ENST00000466192 IGHV4-38-2P0DP08 117 aa14.38□□□□□ -0.11
COL9A3-205ENST00000466192 DDTP30046 118 aa14.38□□□□□ -0.11
COL9A3-205ENST00000466192 FAM3BP58499 235 aaPredicted RBP14.38□□□□□ -0.11
COL9A3-205ENST00000466192 KRTAP10-9P60411 292 aa14.38□□□□□ -0.11
COL9A3-205ENST00000466192 FXYD5Q96DB9 178 aa14.38□□□□□ -0.11
COL9A3-205ENST00000466192 RBM14Q96PK6 669 aaKnown RBP14.38□□□□□ -0.11
COL9A3-205ENST00000466192 RASL11BQ9BPW5 248 aa14.38□□□□□ -0.11
COL9A3-205ENST00000466192 ABCA12Q86UK0 2595 aa14.38□□□□□ -0.11
COL9A3-205ENST00000466192 KMT2BQ9UMN6 2715 aaPredicted RBP14.38□□□□□ -0.11
COL9A3-205ENST00000466192 IGLV11-55A0A075B6I3 123 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms