RNA–Protein interactions for RNA: ENST00000461743.1

VPS52-213, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 3

Gene VPS52, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-213ENST00000461743 OR10J1P30954 320 aa8.95□□□□□ -0.98
VPS52-213ENST00000461743 S100A11P31949 105 aa8.95□□□□□ -0.98
VPS52-213ENST00000461743 RND2P52198 227 aa8.95□□□□□ -0.98
VPS52-213ENST00000461743 YPEL3P61236 119 aaPredicted RBP8.95□□□□□ -0.98
VPS52-213ENST00000461743 DEFB121Q5J5C9 76 aa8.95□□□□□ -0.98
VPS52-213ENST00000461743 BTNL8Q6UX41 500 aa8.95□□□□□ -0.98
VPS52-213ENST00000461743 C12orf45Q8N5I9 185 aaPredicted RBP8.95□□□□□ -0.98
VPS52-213ENST00000461743 SLC35E1Q96K37 410 aa8.95□□□□□ -0.98
VPS52-213ENST00000461743 RAB40CQ96S21 281 aa8.95□□□□□ -0.98
VPS52-213ENST00000461743 SEC22CQ9BRL7 303 aa8.95□□□□□ -0.98
VPS52-213ENST00000461743 C20orf24Q9BUV8 137 aa8.95□□□□□ -0.98
VPS52-213ENST00000461743 TMEM231Q9H6L2 316 aa8.95□□□□□ -0.98
VPS52-213ENST00000461743 TRAV14DV4A0A0A6YYC5 116 aa8.94□□□□□ -0.98
VPS52-213ENST00000461743 YIF1AO95070 293 aa8.94□□□□□ -0.98
VPS52-213ENST00000461743 SCAF4O95104 1147 aaKnown RBP8.94□□□□□ -0.98
VPS52-213ENST00000461743 IGKV1-17P01599 117 aa8.94□□□□□ -0.98
VPS52-213ENST00000461743 FABP1P07148 127 aa8.94□□□□□ -0.98
VPS52-213ENST00000461743 EDN2P20800 178 aa8.94□□□□□ -0.98
VPS52-213ENST00000461743 TAS2R30P59541 319 aa8.94□□□□□ -0.98
VPS52-213ENST00000461743 FGL1Q08830 312 aa8.94□□□□□ -0.98
VPS52-213ENST00000461743 C11orf87Q6NUJ2 197 aa8.94□□□□□ -0.98
VPS52-213ENST00000461743 TOMM20LQ6UXN7 152 aa8.94□□□□□ -0.98
VPS52-213ENST00000461743 RBPMS2Q6ZRY4 209 aaKnown RBP8.94□□□□□ -0.98
VPS52-213ENST00000461743 TMUB2Q71RG4 321 aa8.94□□□□□ -0.98
VPS52-213ENST00000461743 TMEM61Q8N0U2 210 aa8.94□□□□□ -0.98
VPS52-213ENST00000461743 SMIM8Q96KF7 97 aa8.94□□□□□ -0.98
VPS52-213ENST00000461743 SPAG8Q99932 426 aaPredicted RBP8.94□□□□□ -0.98
VPS52-213ENST00000461743 MAGT1Q9H0U3 335 aa8.94□□□□□ -0.98
VPS52-213ENST00000461743 SLC25A32Q9H2D1 315 aa8.94□□□□□ -0.98
VPS52-213ENST00000461743 MRPL36Q9P0J6 103 aaKnown RBP8.94□□□□□ -0.98
VPS52-213ENST00000461743 STRAPQ9Y3F4 350 aaKnown RBP8.94□□□□□ -0.98
VPS52-213ENST00000461743 PUS1Q9Y606 427 aaKnown RBP eCLIP8.94□□□□□ -0.98
VPS52-213ENST00000461743 IZUMO1RA6ND01 250 aa8.93□□□□□ -0.98
VPS52-213ENST00000461743 PRSS46E5RG02 174 aa8.93□□□□□ -0.98
VPS52-213ENST00000461743 SSSCA1O60232 199 aa8.93□□□□□ -0.98
VPS52-213ENST00000461743 GSG1LQ6UXU4 331 aa8.93□□□□□ -0.98
VPS52-213ENST00000461743 Q8N1Y9 231 aa8.93□□□□□ -0.98
VPS52-213ENST00000461743 NARS2Q96I59 477 aaKnown RBP8.93□□□□□ -0.98
VPS52-213ENST00000461743 METTL26Q96S19 204 aa8.93□□□□□ -0.98
VPS52-213ENST00000461743 SMPXQ9UHP9 88 aa8.93□□□□□ -0.98
VPS52-213ENST00000461743 RCL1Q9Y2P8 373 aaKnown RBP8.93□□□□□ -0.98
VPS52-213ENST00000461743 A0A1W2PS18 150 aa8.92□□□□□ -0.98
VPS52-213ENST00000461743 PCP4L1A6NKN8 68 aa8.92□□□□□ -0.98
VPS52-213ENST00000461743 ZNF785A8K8V0 405 aa8.92□□□□□ -0.98
VPS52-213ENST00000461743 FNDC10F2Z333 226 aa8.92□□□□□ -0.98
VPS52-213ENST00000461743 TOMM40O96008 361 aa8.92□□□□□ -0.98
VPS52-213ENST00000461743 NHLRC4P0CG21 123 aaPredicted RBP8.92□□□□□ -0.98
VPS52-213ENST00000461743 CD81P60033 236 aa8.92□□□□□ -0.98
VPS52-213ENST00000461743 POLR2GP62487 172 aaKnown RBP eCLIP8.92□□□□□ -0.98
VPS52-213ENST00000461743 GUCA2BQ16661 112 aa8.92□□□□□ -0.98
VPS52-213ENST00000461743 TIGITQ495A1 244 aa8.92□□□□□ -0.98
VPS52-213ENST00000461743 UQCC3Q6UW78 93 aa8.92□□□□□ -0.98
VPS52-213ENST00000461743 Q8WTZ3 238 aa8.92□□□□□ -0.98
VPS52-213ENST00000461743 NPIPB3Q92617 1050 aa8.92□□□□□ -0.98
VPS52-213ENST00000461743 WDR89Q96FK6 387 aaPredicted RBP8.92□□□□□ -0.98
VPS52-213ENST00000461743 ACY3Q96HD9 319 aa8.92□□□□□ -0.98
VPS52-213ENST00000461743 C2orf50Q96LR7 162 aa8.92□□□□□ -0.98
VPS52-213ENST00000461743 FAM110AQ9BQ89 295 aa8.92□□□□□ -0.98
VPS52-213ENST00000461743 VSIRQ9H7M9 311 aa8.92□□□□□ -0.98
VPS52-213ENST00000461743 STAB2Q8WWQ8 2551 aa8.92□□□□□ -0.98
VPS52-213ENST00000461743 C5orf51A6NDU8 294 aa8.91□□□□□ -0.98
VPS52-213ENST00000461743 OR4C46A6NHA9 309 aa8.91□□□□□ -0.98
VPS52-213ENST00000461743 CCSO14618 274 aa8.91□□□□□ -0.98
VPS52-213ENST00000461743 CHEK1O14757 476 aa8.91□□□□□ -0.98
VPS52-213ENST00000461743 SCGB1D2O95969 90 aa8.91□□□□□ -0.98
VPS52-213ENST00000461743 CRYBB3P26998 211 aa8.91□□□□□ -0.98
VPS52-213ENST00000461743 GAMTQ14353 236 aa8.91□□□□□ -0.98
VPS52-213ENST00000461743 MLANAQ16655 118 aa8.91□□□□□ -0.98
VPS52-213ENST00000461743 SPANXN5Q5MJ07 72 aa8.91□□□□□ -0.98
VPS52-213ENST00000461743 TMEM14EPQ6UXP3 125 aa8.91□□□□□ -0.98
VPS52-213ENST00000461743 THAP8Q8NA92 274 aa8.91□□□□□ -0.98
VPS52-213ENST00000461743 TRGV9Q99603 122 aa8.91□□□□□ -0.98
VPS52-213ENST00000461743 RHPN1-AS1Q9BWJ2 59 aa8.91□□□□□ -0.98
VPS52-213ENST00000461743 NKX6-2Q9C056 277 aaPredicted RBP8.91□□□□□ -0.98
VPS52-213ENST00000461743 SAV1Q9H4B6 383 aaPredicted RBP8.91□□□□□ -0.98
VPS52-213ENST00000461743 PSENENQ9NZ42 101 aa8.91□□□□□ -0.98
VPS52-213ENST00000461743 GSKIPQ9P0R6 139 aa8.91□□□□□ -0.98
VPS52-213ENST00000461743 HUWE1Q7Z6Z7 4374 aaKnown RBP8.9□□□□□ -0.98
VPS52-213ENST00000461743 IGHV3OR16-8A0A075B7F1 116 aa8.9□□□□□ -0.98
VPS52-213ENST00000461743 TRAV2A0A0B4J234 112 aa8.9□□□□□ -0.98
VPS52-213ENST00000461743 ZFP92A6NM28 416 aa8.9□□□□□ -0.98
VPS52-213ENST00000461743 H3BP45 60 aa8.9□□□□□ -0.98
VPS52-213ENST00000461743 TEX46H3BTG2 121 aa8.9□□□□□ -0.98
VPS52-213ENST00000461743 ZNF207O43670 478 aaKnown RBP8.9□□□□□ -0.98
VPS52-213ENST00000461743 MBPP02686 304 aaPredicted RBP8.9□□□□□ -0.98
VPS52-213ENST00000461743 FRMD6-AS1P0C7T7 363 aa8.9□□□□□ -0.98
VPS52-213ENST00000461743 IGHV4-30-4P0DP06 118 aa8.9□□□□□ -0.98
VPS52-213ENST00000461743 PVALBP20472 110 aaPredicted RBP8.9□□□□□ -0.98
VPS52-213ENST00000461743 NPPCP23582 126 aa8.9□□□□□ -0.98
VPS52-213ENST00000461743 OR8G2PQ6IF36 304 aa8.9□□□□□ -0.98
VPS52-213ENST00000461743 ALKAL2Q6UX46 152 aa8.9□□□□□ -0.98
VPS52-213ENST00000461743 ACOT7LQ6ZUV0 252 aa8.9□□□□□ -0.98
VPS52-213ENST00000461743 LINC00469Q8N7U9 141 aa8.9□□□□□ -0.98
VPS52-213ENST00000461743 OR51G1Q8NGK1 321 aa8.9□□□□□ -0.98
VPS52-213ENST00000461743 GRAMD2BQ96HH9 432 aa8.9□□□□□ -0.98
VPS52-213ENST00000461743 ARL6Q9H0F7 186 aa8.9□□□□□ -0.98
VPS52-213ENST00000461743 BIN3Q9NQY0 253 aa8.9□□□□□ -0.98
VPS52-213ENST00000461743 C19orf73Q9NVV2 129 aa8.9□□□□□ -0.98
VPS52-213ENST00000461743 F8W036 122 aa8.89□□□□□ -0.99
VPS52-213ENST00000461743 K7EPK0 472 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms