RNA–Protein interactions for RNA: ENST00000457823.6

SMARCAD1-204, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-204ENST00000457823 MBD3L3A6NE82 208 aaPredicted RBP9.66□□□□□ -0.86
SMARCAD1-204ENST00000457823 MBD3L5A6NJ08 208 aaPredicted RBP9.66□□□□□ -0.86
SMARCAD1-204ENST00000457823 LINC00473A8K010 186 aa9.66□□□□□ -0.86
SMARCAD1-204ENST00000457823 RNASE1P07998 156 aaKnown RBP9.66□□□□□ -0.86
SMARCAD1-204ENST00000457823 STAG3L3P0CL85 134 aa9.66□□□□□ -0.86
SMARCAD1-204ENST00000457823 MYOD1P15172 320 aa9.66□□□□□ -0.86
SMARCAD1-204ENST00000457823 MBD3L2Q8NHZ7 208 aaPredicted RBP9.66□□□□□ -0.86
SMARCAD1-204ENST00000457823 HIST1H2BKO60814 126 aa9.65□□□□□ -0.86
SMARCAD1-204ENST00000457823 LY6HO94772 140 aa9.65□□□□□ -0.86
SMARCAD1-204ENST00000457823 SBF1O95248 1867 aa9.65□□□□□ -0.86
SMARCAD1-204ENST00000457823 HIST1H2BJP06899 126 aa9.65□□□□□ -0.86
SMARCAD1-204ENST00000457823 HIST1H2BOP23527 126 aa9.65□□□□□ -0.86
SMARCAD1-204ENST00000457823 HIST1H2BBP33778 126 aa9.65□□□□□ -0.86
SMARCAD1-204ENST00000457823 HIST1H2BDP58876 126 aa9.65□□□□□ -0.86
SMARCAD1-204ENST00000457823 HIST1H2BCP62807 126 aa9.65□□□□□ -0.86
SMARCAD1-204ENST00000457823 HIST2H2BEQ16778 126 aa9.65□□□□□ -0.86
SMARCAD1-204ENST00000457823 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.65□□□□□ -0.86
SMARCAD1-204ENST00000457823 Q6P435 159 aa9.65□□□□□ -0.86
SMARCAD1-204ENST00000457823 HIST1H2BHQ93079 126 aa9.65□□□□□ -0.86
SMARCAD1-204ENST00000457823 HIST1H2BNQ99877 126 aa9.65□□□□□ -0.86
SMARCAD1-204ENST00000457823 HIST1H2BMQ99879 126 aa9.65□□□□□ -0.86
SMARCAD1-204ENST00000457823 A0A1B0GV90 55 aa9.65□□□□□ -0.86
SMARCAD1-204ENST00000457823 CD7P09564 240 aa9.65□□□□□ -0.86
SMARCAD1-204ENST00000457823 EMP1P54849 157 aa9.65□□□□□ -0.86
SMARCAD1-204ENST00000457823 C1QL4Q86Z23 238 aa9.65□□□□□ -0.86
SMARCAD1-204ENST00000457823 TMEM170AQ8WVE7 144 aa9.65□□□□□ -0.86
SMARCAD1-204ENST00000457823 RSPO3Q9BXY4 272 aaPredicted RBP9.65□□□□□ -0.86
SMARCAD1-204ENST00000457823 SEPSECSQ9HD40 501 aaKnown RBP9.65□□□□□ -0.86
SMARCAD1-204ENST00000457823 PMS2P5A8MQ11 134 aa9.65□□□□□ -0.86
SMARCAD1-204ENST00000457823 IGHG3P01860 377 aa9.65□□□□□ -0.86
SMARCAD1-204ENST00000457823 PSG1P11464 419 aa9.65□□□□□ -0.86
SMARCAD1-204ENST00000457823 KLRD1Q13241 179 aa9.65□□□□□ -0.86
SMARCAD1-204ENST00000457823 SPATA31B1PQ5VZV4 182 aa9.65□□□□□ -0.86
SMARCAD1-204ENST00000457823 TMEM219Q86XT9 240 aa9.65□□□□□ -0.86
SMARCAD1-204ENST00000457823 TTC9CQ8N5M4 171 aa9.65□□□□□ -0.86
SMARCAD1-204ENST00000457823 MRAP2Q96G30 205 aa9.65□□□□□ -0.86
SMARCAD1-204ENST00000457823 GSN-AS1Q9NRJ2 163 aa9.65□□□□□ -0.86
SMARCAD1-204ENST00000457823 NPIPB5A8MRT5 1133 aa9.65□□□□□ -0.87
SMARCAD1-204ENST00000457823 TMEM14EPQ6UXP3 125 aa9.65□□□□□ -0.87
SMARCAD1-204ENST00000457823 C8orf46Q8TAG6 207 aa9.65□□□□□ -0.87
SMARCAD1-204ENST00000457823 HS3ST6Q96QI5 342 aa9.65□□□□□ -0.87
SMARCAD1-204ENST00000457823 IGKV1D-17A0A075B6S4 117 aa9.64□□□□□ -0.87
SMARCAD1-204ENST00000457823 CD33P20138 364 aa9.64□□□□□ -0.87
SMARCAD1-204ENST00000457823 ADMP35318 185 aa9.64□□□□□ -0.87
SMARCAD1-204ENST00000457823 EFNA4P52798 201 aa9.64□□□□□ -0.87
SMARCAD1-204ENST00000457823 C20orf204Q6ZNR8 217 aa9.64□□□□□ -0.87
SMARCAD1-204ENST00000457823 IGHV1-3A0A0C4DH29 117 aa9.64□□□□□ -0.87
SMARCAD1-204ENST00000457823 WISP1O95388 367 aa9.64□□□□□ -0.87
SMARCAD1-204ENST00000457823 WNT2P09544 360 aa9.64□□□□□ -0.87
SMARCAD1-204ENST00000457823 SRD5A1P18405 259 aa9.64□□□□□ -0.87
SMARCAD1-204ENST00000457823 C15orf32Q32M92 178 aa9.64□□□□□ -0.87
SMARCAD1-204ENST00000457823 YLPM1P49750 1951 aaKnown RBP9.64□□□□□ -0.87
SMARCAD1-204ENST00000457823 COL4A6Q14031 1691 aa9.64□□□□□ -0.87
SMARCAD1-204ENST00000457823 PTPN13Q12923 2485 aa9.64□□□□□ -0.87
SMARCAD1-204ENST00000457823 TRGV2A0A075B6R0 118 aa9.63□□□□□ -0.87
SMARCAD1-204ENST00000457823 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.63□□□□□ -0.87
SMARCAD1-204ENST00000457823 PAX8Q06710 450 aa9.63□□□□□ -0.87
SMARCAD1-204ENST00000457823 Q6ZRM9 215 aa9.63□□□□□ -0.87
SMARCAD1-204ENST00000457823 OR13C6PQ8NH95 151 aa9.63□□□□□ -0.87
SMARCAD1-204ENST00000457823 AGMATQ9BSE5 352 aa9.63□□□□□ -0.87
SMARCAD1-204ENST00000457823 SELENOKQ9Y6D0 94 aa9.63□□□□□ -0.87
SMARCAD1-204ENST00000457823 PAX1P15863 534 aa9.63□□□□□ -0.87
SMARCAD1-204ENST00000457823 LDLRAD2Q5SZI1 272 aa9.63□□□□□ -0.87
SMARCAD1-204ENST00000457823 TRBV6-6A0A0A6YYG2 114 aa9.63□□□□□ -0.87
SMARCAD1-204ENST00000457823 A0A0G2JRQ6 117 aa9.63□□□□□ -0.87
SMARCAD1-204ENST00000457823 FOXL2NBQ6ZUU3 175 aa9.63□□□□□ -0.87
SMARCAD1-204ENST00000457823 VMO1Q7Z5L0 202 aa9.63□□□□□ -0.87
SMARCAD1-204ENST00000457823 WFDC12Q8WWY7 111 aa9.63□□□□□ -0.87
SMARCAD1-204ENST00000457823 SMIM13P0DJ93 91 aa9.62□□□□□ -0.87
SMARCAD1-204ENST00000457823 EXOC3-AS1Q8N2X6 119 aa9.62□□□□□ -0.87
SMARCAD1-204ENST00000457823 TMEM167AQ8TBQ9 72 aa9.62□□□□□ -0.87
SMARCAD1-204ENST00000457823 DERL1Q9BUN8 251 aa9.62□□□□□ -0.87
SMARCAD1-204ENST00000457823 PEMTQ9UBM1 199 aa9.62□□□□□ -0.87
SMARCAD1-204ENST00000457823 TRAV1-1A0A0B4J248 108 aa9.62□□□□□ -0.87
SMARCAD1-204ENST00000457823 LOC105371267A0A1B0GV96 52 aa9.62□□□□□ -0.87
SMARCAD1-204ENST00000457823 SLC25A48Q6ZT89 311 aaKnown RBP9.62□□□□□ -0.87
SMARCAD1-204ENST00000457823 MBNL3Q9NUK0 354 aaKnown RBP9.62□□□□□ -0.87
SMARCAD1-204ENST00000457823 TRAV41A0A0B4J266 112 aa9.62□□□□□ -0.87
SMARCAD1-204ENST00000457823 HTN3P15516 51 aa9.62□□□□□ -0.87
SMARCAD1-204ENST00000457823 NTF4P34130 210 aa9.62□□□□□ -0.87
SMARCAD1-204ENST00000457823 RPL15P61313 204 aaKnown RBP9.62□□□□□ -0.87
SMARCAD1-204ENST00000457823 GFI1BQ5VTD9 330 aa9.62□□□□□ -0.87
SMARCAD1-204ENST00000457823 NEUROG1Q92886 237 aa9.62□□□□□ -0.87
SMARCAD1-204ENST00000457823 SCRT1Q9BWW7 348 aa9.62□□□□□ -0.87
SMARCAD1-204ENST00000457823 JKAMPQ9P055 326 aa9.62□□□□□ -0.87
SMARCAD1-204ENST00000457823 TOMM7Q9P0U1 55 aa9.62□□□□□ -0.87
SMARCAD1-204ENST00000457823 LEPP41159 167 aa9.62□□□□□ -0.87
SMARCAD1-204ENST00000457823 VDAC2P45880 294 aaPredicted RBP9.62□□□□□ -0.87
SMARCAD1-204ENST00000457823 ZNF585BQ52M93 769 aa9.62□□□□□ -0.87
SMARCAD1-204ENST00000457823 SAMD13Q5VXD3 122 aa9.62□□□□□ -0.87
SMARCAD1-204ENST00000457823 BRD3OSQ6XYD6 125 aa9.62□□□□□ -0.87
SMARCAD1-204ENST00000457823 TMEM101Q96IK0 257 aa9.62□□□□□ -0.87
SMARCAD1-204ENST00000457823 GAFA1Q96PS6 74 aa9.62□□□□□ -0.87
SMARCAD1-204ENST00000457823 MGST2Q99735 147 aa9.62□□□□□ -0.87
SMARCAD1-204ENST00000457823 GBF1Q92538 1859 aa9.61□□□□□ -0.87
SMARCAD1-204ENST00000457823 TRAV21A0A0B4J279 112 aa9.61□□□□□ -0.87
SMARCAD1-204ENST00000457823 A0A1B0GWJ7 208 aa9.61□□□□□ -0.87
SMARCAD1-204ENST00000457823 LINC00614P0C842 121 aa9.61□□□□□ -0.87
SMARCAD1-204ENST00000457823 GNLYP22749 145 aa9.61□□□□□ -0.87
SMARCAD1-204ENST00000457823 TPTE2P1Q5T6R2 138 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms