RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 OR51G1Q8NGK1 321 aa11.93□□□□□ -0.5
UBE2D4-209ENST00000454428 GPR146Q96CH1 333 aa11.93□□□□□ -0.5
UBE2D4-209ENST00000454428 CNBD2Q96M20 576 aa11.93□□□□□ -0.5
UBE2D4-209ENST00000454428 PDCD10Q9BUL8 212 aa11.93□□□□□ -0.5
UBE2D4-209ENST00000454428 MAGT1Q9H0U3 335 aa11.93□□□□□ -0.5
UBE2D4-209ENST00000454428 Q9H3A6 140 aa11.93□□□□□ -0.5
UBE2D4-209ENST00000454428 BLOC1S6Q9UL45 172 aa11.93□□□□□ -0.5
UBE2D4-209ENST00000454428 ZNF705GA8MUZ8 300 aaPredicted RBP11.92□□□□□ -0.5
UBE2D4-209ENST00000454428 RD3LP0DJH9 198 aa11.92□□□□□ -0.5
UBE2D4-209ENST00000454428 PSG1P11464 419 aa11.92□□□□□ -0.5
UBE2D4-209ENST00000454428 PI3P19957 117 aa11.92□□□□□ -0.5
UBE2D4-209ENST00000454428 RND3P61587 244 aa11.92□□□□□ -0.5
UBE2D4-209ENST00000454428 TSPAN5P62079 268 aa11.92□□□□□ -0.5
UBE2D4-209ENST00000454428 C2orf83Q53S99 150 aa11.92□□□□□ -0.5
UBE2D4-209ENST00000454428 SPATA31B1PQ5VZV4 182 aa11.92□□□□□ -0.5
UBE2D4-209ENST00000454428 NPIPB3Q92617 1050 aa11.92□□□□□ -0.5
UBE2D4-209ENST00000454428 S100A16Q96FQ6 103 aaKnown RBP11.92□□□□□ -0.5
UBE2D4-209ENST00000454428 ENY2Q9NPA8 101 aa11.92□□□□□ -0.5
UBE2D4-209ENST00000454428 CRXO43186 299 aaPredicted RBP11.91□□□□□ -0.5
UBE2D4-209ENST00000454428 SLC25A4P12235 298 aa11.91□□□□□ -0.5
UBE2D4-209ENST00000454428 HTR2BP41595 481 aa11.91□□□□□ -0.5
UBE2D4-209ENST00000454428 DLK1P80370 383 aa11.91□□□□□ -0.5
UBE2D4-209ENST00000454428 TMEM69Q5SWH9 247 aa11.91□□□□□ -0.5
UBE2D4-209ENST00000454428 GPX8Q8TED1 209 aa11.91□□□□□ -0.5
UBE2D4-209ENST00000454428 C20orf173Q96LM9 149 aa11.91□□□□□ -0.5
UBE2D4-209ENST00000454428 IGF2BP2-AS1Q96M15 143 aa11.91□□□□□ -0.5
UBE2D4-209ENST00000454428 M0QYG6 137 aa11.9□□□□□ -0.5
UBE2D4-209ENST00000454428 AZU1P20160 251 aa11.9□□□□□ -0.5
UBE2D4-209ENST00000454428 PRSS3P35030 304 aa11.9□□□□□ -0.5
UBE2D4-209ENST00000454428 ID1P41134 155 aa11.9□□□□□ -0.5
UBE2D4-209ENST00000454428 GABARAPL2P60520 117 aa11.9□□□□□ -0.5
UBE2D4-209ENST00000454428 UBE2NLQ5JXB2 153 aa11.9□□□□□ -0.5
UBE2D4-209ENST00000454428 COQ8AQ8NI60 647 aa11.9□□□□□ -0.5
UBE2D4-209ENST00000454428 RNASEH2CQ8TDP1 164 aaKnown RBP11.9□□□□□ -0.5
UBE2D4-209ENST00000454428 RNF125Q96EQ8 232 aa11.9□□□□□ -0.5
UBE2D4-209ENST00000454428 LOC100506127A0A0U1RQW1 187 aa11.89□□□□□ -0.51
UBE2D4-209ENST00000454428 ATP5G1P05496 136 aa11.89□□□□□ -0.51
UBE2D4-209ENST00000454428 ATP5G3P48201 142 aa11.89□□□□□ -0.51
UBE2D4-209ENST00000454428 PIGPP57054 158 aa11.89□□□□□ -0.51
UBE2D4-209ENST00000454428 SPCS3P61009 180 aa11.89□□□□□ -0.51
UBE2D4-209ENST00000454428 TTC32Q5I0X7 151 aa11.89□□□□□ -0.51
UBE2D4-209ENST00000454428 EBLN2Q6P2I7 272 aa11.89□□□□□ -0.51
UBE2D4-209ENST00000454428 Q6ZRN7 208 aaPredicted RBP11.89□□□□□ -0.51
UBE2D4-209ENST00000454428 C17orf77Q96MU5 243 aa11.89□□□□□ -0.51
UBE2D4-209ENST00000454428 UHRF2Q96PU4 802 aa11.89□□□□□ -0.51
UBE2D4-209ENST00000454428 TMEM208Q9BTX3 173 aa11.89□□□□□ -0.51
UBE2D4-209ENST00000454428 C3orf85A0A1B0GTC6 90 aa11.88□□□□□ -0.51
UBE2D4-209ENST00000454428 TSPOP30536 169 aa11.88□□□□□ -0.51
UBE2D4-209ENST00000454428 TGFBR1P36897 503 aa11.88□□□□□ -0.51
UBE2D4-209ENST00000454428 CLINT1Q14677 625 aa11.88□□□□□ -0.51
UBE2D4-209ENST00000454428 SP6Q3SY56 376 aa11.88□□□□□ -0.51
UBE2D4-209ENST00000454428 OR52E5Q8NH55 327 aa11.88□□□□□ -0.51
UBE2D4-209ENST00000454428 ACY3Q96HD9 319 aa11.88□□□□□ -0.51
UBE2D4-209ENST00000454428 DOK5Q9P104 306 aa11.88□□□□□ -0.51
UBE2D4-209ENST00000454428 CBY3A6NI87 242 aa11.87□□□□□ -0.51
UBE2D4-209ENST00000454428 ISLRO14498 428 aa11.87□□□□□ -0.51
UBE2D4-209ENST00000454428 TMEM127O75204 238 aa11.87□□□□□ -0.51
UBE2D4-209ENST00000454428 LHFPL1Q86WI0 220 aa11.87□□□□□ -0.51
UBE2D4-209ENST00000454428 SAMD12Q8N8I0 201 aa11.87□□□□□ -0.51
UBE2D4-209ENST00000454428 SLC24A4Q8NFF2 622 aa11.87□□□□□ -0.51
UBE2D4-209ENST00000454428 OR4C16Q8NGL9 310 aa11.87□□□□□ -0.51
UBE2D4-209ENST00000454428 FCGR1BQ92637 280 aa11.87□□□□□ -0.51
UBE2D4-209ENST00000454428 ZNF486Q96H40 463 aaPredicted RBP11.87□□□□□ -0.51
UBE2D4-209ENST00000454428 C18orf15Q96N68 181 aa11.87□□□□□ -0.51
UBE2D4-209ENST00000454428 ABHD1Q96SE0 405 aa11.87□□□□□ -0.51
UBE2D4-209ENST00000454428 UPK3BQ9BT76 320 aa11.87□□□□□ -0.51
UBE2D4-209ENST00000454428 PBDC1Q9BVG4 233 aa11.87□□□□□ -0.51
UBE2D4-209ENST00000454428 HEYLQ9NQ87 328 aaPredicted RBP11.87□□□□□ -0.51
UBE2D4-209ENST00000454428 IGKV1D-37A0A075B6S9 117 aa11.86□□□□□ -0.51
UBE2D4-209ENST00000454428 A0A1W2PPQ1 181 aa11.86□□□□□ -0.51
UBE2D4-209ENST00000454428 M0R2Z0 102 aa11.86□□□□□ -0.51
UBE2D4-209ENST00000454428 PGAM2P15259 253 aa11.86□□□□□ -0.51
UBE2D4-209ENST00000454428 UCP1P25874 307 aa11.86□□□□□ -0.51
UBE2D4-209ENST00000454428 SUPT4H1P63272 117 aaKnown RBP11.86□□□□□ -0.51
UBE2D4-209ENST00000454428 OR8G2PQ6IF36 304 aa11.86□□□□□ -0.51
UBE2D4-209ENST00000454428 OR11H7Q8NGC8 314 aa11.86□□□□□ -0.51
UBE2D4-209ENST00000454428 FRZBQ92765 325 aa11.86□□□□□ -0.51
UBE2D4-209ENST00000454428 MDFICQ9P1T7 246 aa11.86□□□□□ -0.51
UBE2D4-209ENST00000454428 LRP1Q07954 4544 aaKnown RBP11.85□□□□□ -0.51
UBE2D4-209ENST00000454428 ATG12O94817 140 aa11.85□□□□□ -0.51
UBE2D4-209ENST00000454428 NUP62P37198 522 aaPredicted RBP11.85□□□□□ -0.51
UBE2D4-209ENST00000454428 LINC00315P59091 139 aa11.85□□□□□ -0.51
UBE2D4-209ENST00000454428 KRTAP10-1P60331 282 aa11.85□□□□□ -0.51
UBE2D4-209ENST00000454428 ZNF90Q03938 601 aa11.85□□□□□ -0.51
UBE2D4-209ENST00000454428 ESRGQ1W209 222 aa11.85□□□□□ -0.51
UBE2D4-209ENST00000454428 SPINK13Q1W4C9 94 aa11.85□□□□□ -0.51
UBE2D4-209ENST00000454428 TRIM16LQ309B1 348 aa11.85□□□□□ -0.51
UBE2D4-209ENST00000454428 C1orf194Q5T5A4 169 aa11.85□□□□□ -0.51
UBE2D4-209ENST00000454428 IZUMO2Q6UXV1 221 aa11.85□□□□□ -0.51
UBE2D4-209ENST00000454428 BAP18Q8IXM2 172 aa11.85□□□□□ -0.51
UBE2D4-209ENST00000454428 RRNAD1Q96FB5 475 aaKnown RBP11.85□□□□□ -0.51
UBE2D4-209ENST00000454428 RPRMQ9NS64 109 aa11.85□□□□□ -0.51
UBE2D4-209ENST00000454428 PGPEP1Q9NXJ5 209 aa11.85□□□□□ -0.51
UBE2D4-209ENST00000454428 ZNF586Q9NXT0 402 aa11.85□□□□□ -0.51
UBE2D4-209ENST00000454428 ANKRD65E5RJM6 399 aa11.84□□□□□ -0.51
UBE2D4-209ENST00000454428 RCVRNP35243 200 aa11.84□□□□□ -0.51
UBE2D4-209ENST00000454428 CNN1P51911 297 aaKnown RBP11.84□□□□□ -0.51
UBE2D4-209ENST00000454428 ETFRF1Q6IPR1 90 aa11.84□□□□□ -0.51
UBE2D4-209ENST00000454428 LHFPL5Q8TAF8 219 aa11.84□□□□□ -0.51
UBE2D4-209ENST00000454428 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms