RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 RBBP6Q7Z6E9 1792 aaKnown RBP-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 POLQO75417 2590 aa-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 RIMBP3CA6NJZ7 1639 aa-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 RIMBP3BA6NNM3 1639 aa-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 RIMBP3Q9UFD9 1639 aa-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 FAT2Q9NYQ8 4349 aa-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 TRAV10A0A0B4J240 114 aa-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 LOC107984156A0A0G2JMH3 177 aa-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 EXOC1LA0A1B0GW35 172 aa-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 A0A1W2PRS3 328 aa-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 FABP12A6NFH5 140 aa-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 F8VZ95 297 aa-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 TIMM17BO60830 172 aa-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 HMMRO75330 724 aa-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 APOA1P02647 267 aa-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 OR4E1P0C645 316 aa-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 RPS12P25398 132 aaKnown RBP-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 CASP1P29466 404 aa-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 BLVRAP53004 296 aa-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 NAA20P61599 178 aa-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 DYNLT1P63172 113 aa-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 OCIAD2Q56VL3 154 aa-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 C1orf134Q5TEV5 83 aa-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 TNFAIP8L2Q6P589 184 aaPredicted RBP-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 ANGPTL5Q86XS5 388 aa-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 ZGRF1Q86YA3 2104 aa-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 ARL17AQ8IVW1 177 aa-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 LRRC25Q8N386 305 aaPredicted RBP-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 MUCL1Q96DR8 90 aa-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 SLAMF6Q96DU3 332 aa-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 KIFC1Q9BW19 673 aa-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 UPF3BQ9BZI7 483 aaKnown RBP-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 OR51I2Q9H344 312 aa-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 FAM96AQ9H5X1 160 aa-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 TREM1Q9NP99 234 aa-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 C14orf132Q9NPU4 83 aa-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 SPANXB1Q9NS25 103 aaPredicted RBP-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 PTPRFP10586 1907 aa-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 PLXND1Q9Y4D7 1925 aa-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 ARHGEF28Q8N1W1 1705 aaKnown RBP-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 HERC1Q15751 4861 aa-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 RNF213Q63HN8 5207 aa-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 RTL1A6NKG5 1358 aa-0.45□□□□□ -2.48
SNHG3-203ENST00000447507 DOCK5Q9H7D0 1870 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 WRNQ14191 1432 aaPredicted RBP eCLIP-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 TNS3Q68CZ2 1445 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 ERBINQ96RT1 1412 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 MYH7BA7E2Y1 1941 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 SONP18583 2426 aaKnown RBP-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 TGIF2-C20orf24A0A0A6YYL0 155 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 TRPC5OSA6NMA1 111 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 C10orf142B7Z368 130 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 EEF1E1-BLOC1S5C9J1V9 151 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 CXCR6O00574 342 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 IGLV1-51P01701 117 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 HLA-DRB1P01911 266 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 ISG15P05161 165 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 IVLP07476 585 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 COX5BP10606 129 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 COX7CP15954 63 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 PTMSP20962 102 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 SRIP30626 198 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 RNASE4P34096 147 aaKnown RBP-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 RPL5P46777 297 aaKnown RBP-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 UBE2G2P60604 165 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 RPL37AP61513 92 aaKnown RBP-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 RPL37P61927 97 aaKnown RBP-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 MLLT11Q13015 90 aaPredicted RBP-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 PMAIP1Q13794 54 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 TSNQ15631 228 aaKnown RBP-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 SDHAF4Q5VUM1 108 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 LPCAT3Q6P1A2 487 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 PATE2Q6UY27 113 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 CASC2Q6XLA1 102 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 TEN1Q86WV5 123 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 TMEM86BQ8N661 226 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 SLC30A7Q8NEW0 376 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 OR5D14Q8NGL3 314 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 STAG3L4Q8TBR4 150 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 TEX47Q8TBZ9 253 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 TOMM6Q96B49 74 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 PPP1R2P1Q96PQ5 205 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 TP53RKQ96S44 253 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 LYSMD1Q96S90 227 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 GPER1Q99527 375 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 HIST1H2BLQ99880 126 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 NIPSNAP1Q9BPW8 284 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 PRADC1Q9BSG0 188 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 OPTCQ9UBM4 332 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 CYSLTR1Q9Y271 337 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 EVC2Q86UK5 1308 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 SPTBP11277 2137 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 RFX7Q2KHR2 1363 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 ROBO3Q96MS0 1386 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 SCN8AQ9UQD0 1980 aa-0.46□□□□□ -2.48
SNHG3-203ENST00000447507 FAM208BQ5VWN6 2430 aa-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 FREM3P0C091 2139 aa-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 ZANQ9Y493 2812 aa-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 A0A087X0T9 212 aa-0.47□□□□□ -2.48
SNHG3-203ENST00000447507 FAM236DA0A1B0GTK5 79 aa-0.47□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms