RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 LRRC75AQ8NAA5 344 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 WFDC11Q8NEX6 87 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 OR2A1Q8NGT9 310 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 ZNF502Q8TBZ5 544 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 TAF15Q92804 592 aaKnown RBP eCLIP2.31□□□□□ -2.04
LIG4-203ENST00000442234 TMEM54Q969K7 222 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 PRSS27Q9BQR3 290 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 SLC25A33Q9BSK2 321 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 TM2D1Q9BX74 207 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 OR2H1Q9GZK4 316 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 LIN7CQ9NUP9 197 aaKnown RBP2.31□□□□□ -2.04
LIG4-203ENST00000442234 C19orf25Q9UFG5 118 aaPredicted RBP2.31□□□□□ -2.04
LIG4-203ENST00000442234 V9GYY9 64 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 PLXNA4Q9HCM2 1894 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 DOCK4Q8N1I0 1966 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP2.31□□□□□ -2.04
LIG4-203ENST00000442234 LOC107984640A0A0U1RRK4 108 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 SH2D7A6NKC9 451 aaPredicted RBP2.31□□□□□ -2.04
LIG4-203ENST00000442234 K7ERJ3 54 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 FAM106CPP0CH98 169 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 SCGB1C2P0DMR2 95 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 UNC119Q13432 240 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 ZNF141Q15928 474 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 FAM106AQ4KMX7 169 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 C1orf100Q5SVJ3 147 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 MBNL2Q5VZF2 373 aaKnown RBP2.31□□□□□ -2.04
LIG4-203ENST00000442234 SLC48A1Q6P1K1 146 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 FAM19A5Q7Z5A7 132 aaPredicted RBP2.31□□□□□ -2.04
LIG4-203ENST00000442234 LHFPL1Q86WI0 220 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 CDRT4Q8N9R6 151 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 OTOSQ8NHW6 89 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 MRAPQ8TCY5 172 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 PPDPFLQ8WWR9 84 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 DDB2Q92466 427 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 GPX7Q96SL4 187 aaPredicted RBP2.31□□□□□ -2.04
LIG4-203ENST00000442234 KIR2DL4Q99706 377 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 SSBP3Q9BWW4 388 aaPredicted RBP2.31□□□□□ -2.04
LIG4-203ENST00000442234 C1QTNF5Q9BXJ0 243 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 SCRT2Q9NQ03 307 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 HEYLQ9NQ87 328 aaPredicted RBP2.31□□□□□ -2.04
LIG4-203ENST00000442234 ZNF256Q9Y2P7 627 aaPredicted RBP2.31□□□□□ -2.04
LIG4-203ENST00000442234 CUBNO60494 3623 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 FANCMQ8IYD8 2048 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 PHF3Q92576 2039 aaKnown RBP2.3□□□□□ -2.04
LIG4-203ENST00000442234 A0A087WX48 190 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 MOSP00540 346 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 SP1P08047 785 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 LINC00694P0DN24 101 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 NTF4P34130 210 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 PTGDSP41222 190 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 LGALS4P56470 323 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 GNB1P62873 340 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 ZNF146Q15072 292 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 ZNF726P1Q15940 193 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 SFTA2Q6UW10 78 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 CENPVQ7Z7K6 275 aaPredicted RBP2.3□□□□□ -2.04
LIG4-203ENST00000442234 MOGAT3Q86VF5 341 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 OSR2Q8N2R0 312 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 GCSAMQ8N6F7 178 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 DCAF4L2Q8NA75 395 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 OCC1Q8TAD7 63 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 DEFB126Q9BYW3 111 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 TXNIPQ9H3M7 391 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 ZNF442Q9H7R0 627 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 SIGLEC8Q9NYZ4 499 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 POLDIP2Q9Y2S7 368 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 LSM4Q9Y4Z0 139 aaKnown RBP2.3□□□□□ -2.04
LIG4-203ENST00000442234 ANKRD36A6QL64 1941 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 SRRM2Q9UQ35 2752 aaKnown RBP2.3□□□□□ -2.04
LIG4-203ENST00000442234 PIGBOS1A0A0B4J2F0 54 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 IGHV3-64DA0A0J9YX35 117 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 C19orf84I3L1E1 186 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 K7EN84 100 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 NPFFO15130 113 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 LDB3O75112 727 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 IGHV3-9P01782 118 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 IL4P05112 153 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 PSMB2P49721 201 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 TMEM50BP56557 158 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 RPS16P62249 146 aaKnown RBP2.3□□□□□ -2.04
LIG4-203ENST00000442234 MFAP5Q13361 173 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 SPATA46Q5T0L3 261 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 FNDC7Q5VTL7 733 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 SIGLEC15Q6ZMC9 328 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 ZNF683Q8IZ20 524 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 RPRMLQ8N4K4 120 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 RPP25LQ8N5L8 163 aaKnown RBP2.3□□□□□ -2.04
LIG4-203ENST00000442234 OR10J6PQ8NGY7 276 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 OR51H1Q8NH63 302 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 HOXB13Q92826 284 aaPredicted RBP2.3□□□□□ -2.04
LIG4-203ENST00000442234 PRADC1Q9BSG0 188 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 TM2D2Q9BX73 214 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 FBXL15Q9H469 300 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 PILRAQ9UKJ1 303 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 PATJQ8NI35 1801 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 SCO2A0A1W2PP80 73 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 CEACAM18A8MTB9 384 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 SYNGR2O43760 224 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 SRSF10O75494 262 aaKnown RBP2.3□□□□□ -2.04
LIG4-203ENST00000442234 NPPBP16860 134 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms