RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 SHISA9B4DS77 424 aa4.63□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 K7ENP7 123 aa4.63□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 M0R1X1 148 aa4.63□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 OVOL1O14753 267 aa4.63□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 TNFSF12O43508 249 aa4.63□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 NGFP01138 241 aa4.63□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 ZNF83P51522 516 aa4.63□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 RPS21P63220 83 aaKnown RBP4.63□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 CCL20P78556 96 aa4.63□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 C12orf74Q32Q52 190 aa4.63□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 PRR30Q53SZ7 412 aaPredicted RBP4.63□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 TTC32Q5I0X7 151 aa4.63□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 TSPO2Q5TGU0 170 aa4.63□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 SCGB1D4Q6XE38 83 aa4.63□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 OR2M3Q8NG83 312 aa4.63□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 RPS4Y2Q8TD47 263 aa4.63□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 C2orf48Q96LS8 159 aa4.63□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 LAMTOR3Q9UHA4 124 aa4.63□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 PXMP4Q9Y6I8 212 aa4.63□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 CDH23Q9H251 3354 aa4.62□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 MDC1Q14676 2089 aaKnown RBP4.62□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 SNRNP200O75643 2136 aaKnown RBP4.62□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 CEP290O15078 2479 aa4.62□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 LINC01619G3V211 115 aa4.62□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 H0YJW9 148 aa4.62□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 DEDDO75618 318 aa4.62□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 CGAP01215 116 aa4.62□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 PRSS2P07478 247 aa4.62□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 SSR2P43308 183 aa4.62□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 PMCHL1Q16048 86 aa4.62□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 BVES-AS1Q5T3Y7 98 aa4.62□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 C1QL2Q7Z5L3 287 aa4.62□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 ZNF584Q8IVC4 421 aa4.62□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 C11orf53Q8IXP5 236 aa4.62□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 LINC01555Q8NAE3 123 aa4.62□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 C19orf24Q9BVV8 132 aa4.62□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 TMEM133Q9H2Q1 129 aa4.62□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 PLEKHA3Q9HB20 300 aa4.62□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 NPVFQ9HCQ7 196 aa4.62□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 KLF13Q9Y2Y9 288 aaPredicted RBP4.62□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 TRAPPC1Q9Y5R8 145 aa4.62□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 TRAV8-6A0A0B4J262 113 aa4.61□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 PLAC8L1A1L4L8 177 aa4.61□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 FNDC10F2Z333 226 aa4.61□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 H3BP45 60 aa4.61□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 K7EP34 96 aa4.61□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 HMGN4O00479 90 aa4.61□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 ZNF253O75346 499 aa4.61□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 HLA-DRB1P01911 266 aa4.61□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 FRMD6-AS1P0C7T7 363 aa4.61□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 BCL2P10415 239 aa4.61□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 YPEL3P61236 119 aaPredicted RBP4.61□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 MLF2Q15773 248 aaPredicted RBP4.61□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 MRPL54Q6P161 138 aaKnown RBP4.61□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 Q6ZPA2 131 aa4.61□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 ZNF843Q8N446 348 aa4.61□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 SIGLECL1Q8N7X8 197 aa4.61□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 KRTAP3-1Q9BYR8 98 aa4.61□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 ATG2AQ2TAZ0 1938 aa4.61□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 TRAV1-1A0A0B4J248 108 aa4.61□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 GGTLC3B5MD39 225 aa4.61□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 EPPINO95925 133 aa4.61□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 CD55P08174 381 aa4.61□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 SPINK8P0C7L1 97 aa4.61□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 ATP5G3P48201 142 aa4.61□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 KRTDAPP60985 99 aa4.61□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 DAZ2Q13117 558 aaKnown RBP4.61□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 ADIRFQ15847 76 aa4.61□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 NSUN5P1Q3KNT7 163 aa4.61□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 IGFL4Q6B9Z1 124 aa4.61□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 FOXI2Q6ZQN5 318 aa4.61□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 DAZ4Q86SG3 579 aaKnown RBP4.61□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 PRIMA1Q86XR5 153 aa4.61□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 TEX29Q8N6K0 151 aa4.61□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 OR4K13Q8NH42 304 aa4.61□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 PLA2G2FQ9BZM2 168 aa4.61□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 DAZ1Q9NQZ3 744 aaKnown RBP4.61□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 DAZ3Q9NR90 486 aaKnown RBP4.61□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 AK3Q9UIJ7 227 aa4.61□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 HEBP2Q9Y5Z4 205 aa4.61□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 RANBP2P49792 3224 aaKnown RBP4.6□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 TRAV9-2A0A087WT02 112 aa4.6□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 IGKV1-8A0A0C4DH67 115 aa4.6□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 C8orf87E5RJ46 101 aa4.6□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 CDC42EP2O14613 210 aa4.6□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 MYCNOSP40205 109 aa4.6□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 CDKN2AP42771 156 aaKnown RBP4.6□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 NCBP2P52298 156 aaKnown RBP eCLIP4.6□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 DAD1P61803 113 aa4.6□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 PAX8Q06710 450 aa4.6□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 Q0VG73 95 aa4.6□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 CATR1Q13166 79 aa4.6□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 Q499Y3 187 aa4.6□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 CYP2G1PQ6ZSU1 146 aa4.6□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 TTC9CQ8N5M4 171 aa4.6□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 OR10P1Q8NGE3 313 aa4.6□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 ELSPBP1Q96BH3 223 aa4.6□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 SPACA5Q96QH8 159 aa4.6□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 SCN3AQ9NY46 2000 aa4.6□□□□□ -1.67
ALMS1-IT1-201ENST00000441587 DPRXA6NFQ7 191 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms