RNA–Protein interactions for RNA: ENST00000432072.6

FN1-209, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,759 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-209ENST00000432072 MUC21A0A0G2JKD1 596 aa8.22□□□□□ -1.09
FN1-209ENST00000432072 MUC21A0A140T8X8 626 aa8.22□□□□□ -1.09
FN1-209ENST00000432072 ZNF250P15622 560 aa8.22□□□□□ -1.09
FN1-209ENST00000432072 C1orf122Q6ZSJ8 110 aa8.22□□□□□ -1.09
FN1-209ENST00000432072 VCX2Q9H322 139 aa8.22□□□□□ -1.09
FN1-209ENST00000432072 TRBV7-9A0A0J9YWB2 115 aa8.21□□□□□ -1.09
FN1-209ENST00000432072 RAMP3O60896 148 aa8.21□□□□□ -1.09
FN1-209ENST00000432072 LURAP1LQ8IV03 231 aa8.21□□□□□ -1.09
FN1-209ENST00000432072 GTF3AQ92664 365 aaKnown RBP8.21□□□□□ -1.09
FN1-209ENST00000432072 SMDT1Q9H4I9 107 aa8.21□□□□□ -1.09
FN1-209ENST00000432072 KLF2Q9Y5W3 355 aaPredicted RBP8.21□□□□□ -1.09
FN1-209ENST00000432072 ERASQ7Z444 233 aa8.21□□□□□ -1.09
FN1-209ENST00000432072 KIR3DL3Q8N743 410 aa8.21□□□□□ -1.09
FN1-209ENST00000432072 PLPPR1Q8TBJ4 325 aa8.21□□□□□ -1.09
FN1-209ENST00000432072 ATP5LO75964 103 aa8.21□□□□□ -1.1
FN1-209ENST00000432072 GHRHP01286 108 aa8.21□□□□□ -1.1
FN1-209ENST00000432072 HLA-DQA1P01909 254 aa8.21□□□□□ -1.1
FN1-209ENST00000432072 OR11H7Q8NGC8 314 aa8.21□□□□□ -1.1
FN1-209ENST00000432072 SCGB3A1Q96QR1 104 aa8.21□□□□□ -1.1
FN1-209ENST00000432072 MRPL13Q9BYD1 178 aaKnown RBP8.21□□□□□ -1.1
FN1-209ENST00000432072 ALX3O95076 343 aa8.21□□□□□ -1.1
FN1-209ENST00000432072 CGAP01215 116 aa8.21□□□□□ -1.1
FN1-209ENST00000432072 ST20Q9HBF5 79 aa8.21□□□□□ -1.1
FN1-209ENST00000432072 FCN3O75636 299 aa8.21□□□□□ -1.1
FN1-209ENST00000432072 MT-ND6P03923 174 aa8.21□□□□□ -1.1
FN1-209ENST00000432072 DEFB130BP0DP73 79 aa8.21□□□□□ -1.1
FN1-209ENST00000432072 DEFB130AP0DP74 79 aa8.21□□□□□ -1.1
FN1-209ENST00000432072 NAT1P18440 290 aa8.21□□□□□ -1.1
FN1-209ENST00000432072 LYPD2Q6UXB3 125 aa8.21□□□□□ -1.1
FN1-209ENST00000432072 VN1R17PQ8TDU5 208 aa8.21□□□□□ -1.1
FN1-209ENST00000432072 ALX4Q9H161 411 aaPredicted RBP8.21□□□□□ -1.1
FN1-209ENST00000432072 IGHV3-53P01767 116 aa8.2□□□□□ -1.1
FN1-209ENST00000432072 IFI27P40305 119 aaPredicted RBP8.2□□□□□ -1.1
FN1-209ENST00000432072 NDPQ00604 133 aa8.2□□□□□ -1.1
FN1-209ENST00000432072 COTL1Q14019 142 aa8.2□□□□□ -1.1
FN1-209ENST00000432072 PAQR4Q8N4S7 273 aaPredicted RBP8.2□□□□□ -1.1
FN1-209ENST00000432072 C11orf91Q3C1V1 193 aa8.2□□□□□ -1.1
FN1-209ENST00000432072 OR1P1Q8NH06 330 aa8.2□□□□□ -1.1
FN1-209ENST00000432072 SEPSECSQ9HD40 501 aaKnown RBP8.2□□□□□ -1.1
FN1-209ENST00000432072 PLSCR2Q9NRY7 297 aa8.2□□□□□ -1.1
FN1-209ENST00000432072 TSSC4Q9Y5U2 329 aaPredicted RBP8.2□□□□□ -1.1
FN1-209ENST00000432072 CD8AP01732 235 aa8.2□□□□□ -1.1
FN1-209ENST00000432072 UBE2E1P51965 193 aa8.2□□□□□ -1.1
FN1-209ENST00000432072 FOXL1Q12952 345 aa8.2□□□□□ -1.1
FN1-209ENST00000432072 ZNF345Q14585 488 aa8.2□□□□□ -1.1
FN1-209ENST00000432072 NPCDR1Q9BY65 106 aa8.2□□□□□ -1.1
FN1-209ENST00000432072 OTORQ9NRC9 128 aa8.2□□□□□ -1.1
FN1-209ENST00000432072 LEPROTL1O95214 131 aa8.2□□□□□ -1.1
FN1-209ENST00000432072 CA1P00915 261 aaPredicted RBP8.2□□□□□ -1.1
FN1-209ENST00000432072 SELLP14151 372 aa8.2□□□□□ -1.1
FN1-209ENST00000432072 FBLN7Q53RD9 439 aa8.2□□□□□ -1.1
FN1-209ENST00000432072 HAPLN4Q86UW8 402 aa8.2□□□□□ -1.1
FN1-209ENST00000432072 ISOC2Q96AB3 205 aa8.2□□□□□ -1.1
FN1-209ENST00000432072 RPL15P61313 204 aaKnown RBP8.2□□□□□ -1.1
FN1-209ENST00000432072 FAM169BQ8N8A8 192 aa8.2□□□□□ -1.1
FN1-209ENST00000432072 IGHV2-70DA0A0C4DH43 119 aa8.19□□□□□ -1.1
FN1-209ENST00000432072 LINC00271P0C7V0 271 aa8.19□□□□□ -1.1
FN1-209ENST00000432072 HBBP68871 147 aa8.19□□□□□ -1.1
FN1-209ENST00000432072 IGHV3-73A0A0B4J1V6 119 aa8.19□□□□□ -1.1
FN1-209ENST00000432072 TRAV12-3A0A0B4J271 114 aa8.19□□□□□ -1.1
FN1-209ENST00000432072 FOXG1P55316 489 aaPredicted RBP8.19□□□□□ -1.1
FN1-209ENST00000432072 SFRP2Q96HF1 295 aa8.19□□□□□ -1.1
FN1-209ENST00000432072 A0A1B0GUT8 65 aa8.19□□□□□ -1.1
FN1-209ENST00000432072 RPLP1P05386 114 aaKnown RBP8.19□□□□□ -1.1
FN1-209ENST00000432072 FAM3BP58499 235 aaPredicted RBP8.19□□□□□ -1.1
FN1-209ENST00000432072 TTC28Q96AY4 2481 aa8.19□□□□□ -1.1
FN1-209ENST00000432072 GRIFINA4D1Z8 144 aa8.19□□□□□ -1.1
FN1-209ENST00000432072 SRSF4Q08170 494 aaKnown RBP8.19□□□□□ -1.1
FN1-209ENST00000432072 OR10W1Q8NGF6 305 aa8.19□□□□□ -1.1
FN1-209ENST00000432072 SLC25A38Q96DW6 304 aa8.19□□□□□ -1.1
FN1-209ENST00000432072 MRPL18Q9H0U6 180 aaKnown RBP8.19□□□□□ -1.1
FN1-209ENST00000432072 TMEM144Q7Z5S9 345 aa8.19□□□□□ -1.1
FN1-209ENST00000432072 FAM89BQ8N5H3 189 aa8.19□□□□□ -1.1
FN1-209ENST00000432072 PAM16Q9Y3D7 125 aa8.19□□□□□ -1.1
FN1-209ENST00000432072 FHITP49789 147 aa8.19□□□□□ -1.1
FN1-209ENST00000432072 LINC00114Q6XXX2 140 aa8.19□□□□□ -1.1
FN1-209ENST00000432072 CIARTQ8N365 385 aaPredicted RBP8.18□□□□□ -1.1
FN1-209ENST00000432072 FOXC2Q99958 501 aa8.18□□□□□ -1.1
FN1-209ENST00000432072 LMO1P25800 156 aa8.18□□□□□ -1.1
FN1-209ENST00000432072 PRTN3P24158 256 aa8.18□□□□□ -1.1
FN1-209ENST00000432072 RPL36AP83881 106 aaKnown RBP8.18□□□□□ -1.1
FN1-209ENST00000432072 PHLDA1Q8WV24 401 aaPredicted RBP8.18□□□□□ -1.1
FN1-209ENST00000432072 RPL36ALQ969Q0 106 aaKnown RBP8.18□□□□□ -1.1
FN1-209ENST00000432072 C18orf15Q96N68 181 aa8.18□□□□□ -1.1
FN1-209ENST00000432072 GATA2P23769 480 aaPredicted RBP8.18□□□□□ -1.1
FN1-209ENST00000432072 TDGF1P3P51864 188 aa8.18□□□□□ -1.1
FN1-209ENST00000432072 LYZL4Q96KX0 146 aa8.18□□□□□ -1.1
FN1-209ENST00000432072 RNF5Q99942 180 aa8.18□□□□□ -1.1
FN1-209ENST00000432072 TFF3Q07654 80 aa8.18□□□□□ -1.1
FN1-209ENST00000432072 DUTP33316 252 aaKnown RBP8.17□□□□□ -1.1
FN1-209ENST00000432072 LHBP01229 141 aa8.17□□□□□ -1.1
FN1-209ENST00000432072 TMEM183AQ8IXX5 376 aa8.17□□□□□ -1.1
FN1-209ENST00000432072 RAI1Q7Z5J4 1906 aaPredicted RBP8.17□□□□□ -1.1
FN1-209ENST00000432072 DLX4Q92988 240 aaPredicted RBP8.17□□□□□ -1.1
FN1-209ENST00000432072 SRRM4A7MD48 611 aaKnown RBP8.17□□□□□ -1.1
FN1-209ENST00000432072 RND3P61587 244 aa8.17□□□□□ -1.1
FN1-209ENST00000432072 S100A7L2Q5SY68 101 aa8.17□□□□□ -1.1
FN1-209ENST00000432072 DMRTC2Q8IXT2 367 aaPredicted RBP8.17□□□□□ -1.1
FN1-209ENST00000432072 TMEM86BQ8N661 226 aa8.17□□□□□ -1.1
FN1-209ENST00000432072 GAFA1Q96PS6 74 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms