RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 ZNF860A6NHJ4 632 aa1.39□□□□□ -2.19
HMGB1P27-201ENST00000431429 G3V3Q6 166 aa1.39□□□□□ -2.19
HMGB1P27-201ENST00000431429 ZNF73O43830 326 aaPredicted RBP1.39□□□□□ -2.19
HMGB1P27-201ENST00000431429 MFSD11O43934 449 aa1.39□□□□□ -2.19
HMGB1P27-201ENST00000431429 NIPSNAP2O75323 286 aa1.39□□□□□ -2.19
HMGB1P27-201ENST00000431429 LY6HO94772 140 aa1.39□□□□□ -2.19
HMGB1P27-201ENST00000431429 IL6P05231 212 aa1.39□□□□□ -2.19
HMGB1P27-201ENST00000431429 CTSGP08311 255 aa1.39□□□□□ -2.19
HMGB1P27-201ENST00000431429 KDELR1P24390 212 aa1.39□□□□□ -2.19
HMGB1P27-201ENST00000431429 OR10J1P30954 320 aa1.39□□□□□ -2.19
HMGB1P27-201ENST00000431429 MAGEA2P43356 314 aa1.39□□□□□ -2.19
HMGB1P27-201ENST00000431429 ZNF140P52738 457 aaPredicted RBP1.39□□□□□ -2.19
HMGB1P27-201ENST00000431429 ACTBP60709 375 aa1.39□□□□□ -2.19
HMGB1P27-201ENST00000431429 CXCR4P61073 352 aa1.39□□□□□ -2.19
HMGB1P27-201ENST00000431429 HERVK_113P63121 156 aa1.39□□□□□ -2.19
HMGB1P27-201ENST00000431429 SLC35A2P78381 396 aa1.39□□□□□ -2.19
HMGB1P27-201ENST00000431429 FABP5Q01469 135 aa1.39□□□□□ -2.19
HMGB1P27-201ENST00000431429 EBPQ15125 230 aaKnown RBP1.39□□□□□ -2.19
HMGB1P27-201ENST00000431429 LRRN1Q6UXK5 716 aa1.39□□□□□ -2.19
HMGB1P27-201ENST00000431429 NATD1Q8N6N6 113 aa1.39□□□□□ -2.19
HMGB1P27-201ENST00000431429 WFDC9Q8NEX5 89 aa1.39□□□□□ -2.19
HMGB1P27-201ENST00000431429 OR13C4Q8NGS5 318 aa1.39□□□□□ -2.19
HMGB1P27-201ENST00000431429 CLDND2Q8NHS1 167 aa1.39□□□□□ -2.19
HMGB1P27-201ENST00000431429 NAT14Q8WUY8 206 aa1.39□□□□□ -2.19
HMGB1P27-201ENST00000431429 CDCA4Q9BXL8 241 aa1.39□□□□□ -2.19
HMGB1P27-201ENST00000431429 BCL2L14Q9BZR8 327 aa1.39□□□□□ -2.19
HMGB1P27-201ENST00000431429 DERL2Q9GZP9 239 aa1.39□□□□□ -2.19
HMGB1P27-201ENST00000431429 PARVBQ9HBI1 364 aa1.39□□□□□ -2.19
HMGB1P27-201ENST00000431429 DYNLRB1Q9NP97 96 aa1.39□□□□□ -2.19
HMGB1P27-201ENST00000431429 FAM206AQ9NX38 181 aa1.39□□□□□ -2.19
HMGB1P27-201ENST00000431429 NKIRAS1Q9NYS0 192 aa1.39□□□□□ -2.19
HMGB1P27-201ENST00000431429 EMC3Q9P0I2 261 aa1.39□□□□□ -2.19
HMGB1P27-201ENST00000431429 HHLA2Q9UM44 414 aa1.39□□□□□ -2.19
HMGB1P27-201ENST00000431429 KLK5Q9Y337 293 aaPredicted RBP1.39□□□□□ -2.19
HMGB1P27-201ENST00000431429 ZNF337Q9Y3M9 751 aa1.39□□□□□ -2.19
HMGB1P27-201ENST00000431429 HSPE1-MOB4S4R3N1 261 aa1.39□□□□□ -2.19
HMGB1P27-201ENST00000431429 PRKDCP78527 4128 aaKnown RBP1.39□□□□□ -2.19
HMGB1P27-201ENST00000431429 DNAJC13O75165 2243 aa1.39□□□□□ -2.19
HMGB1P27-201ENST00000431429 ANKRD36A6QL64 1941 aa1.38□□□□□ -2.19
HMGB1P27-201ENST00000431429 ANK3Q12955 4377 aaKnown RBP1.38□□□□□ -2.19
HMGB1P27-201ENST00000431429 DHRS12A0PJE2 317 aa1.38□□□□□ -2.19
HMGB1P27-201ENST00000431429 LINC00862A6NCI5 91 aa1.38□□□□□ -2.19
HMGB1P27-201ENST00000431429 ODF3BA8MYP8 253 aa1.38□□□□□ -2.19
HMGB1P27-201ENST00000431429 CLDN25C9JDP6 229 aa1.38□□□□□ -2.19
HMGB1P27-201ENST00000431429 K7EIL1 84 aa1.38□□□□□ -2.19
HMGB1P27-201ENST00000431429 M0R233 179 aa1.38□□□□□ -2.19
HMGB1P27-201ENST00000431429 CXCR6O00574 342 aa1.38□□□□□ -2.19
HMGB1P27-201ENST00000431429 OR1I1O60431 355 aa1.38□□□□□ -2.19
HMGB1P27-201ENST00000431429 STK16O75716 305 aa1.38□□□□□ -2.19
HMGB1P27-201ENST00000431429 LYZL6O75951 148 aa1.38□□□□□ -2.19
HMGB1P27-201ENST00000431429 CRYGDP07320 174 aa1.38□□□□□ -2.19
HMGB1P27-201ENST00000431429 C8GP07360 202 aa1.38□□□□□ -2.19
HMGB1P27-201ENST00000431429 MPC1LP0DKB6 136 aa1.38□□□□□ -2.19
HMGB1P27-201ENST00000431429 RPS3P23396 243 aaKnown RBP eCLIP1.38□□□□□ -2.19
HMGB1P27-201ENST00000431429 NPPCP23582 126 aa1.38□□□□□ -2.19
HMGB1P27-201ENST00000431429 FKBP2P26885 142 aaKnown RBP1.38□□□□□ -2.19
HMGB1P27-201ENST00000431429 RPL22P35268 128 aaKnown RBP1.38□□□□□ -2.19
HMGB1P27-201ENST00000431429 CDC34P49427 236 aaPredicted RBP1.38□□□□□ -2.19
HMGB1P27-201ENST00000431429 PSG4Q00888 419 aa1.38□□□□□ -2.19
HMGB1P27-201ENST00000431429 PLCXD2Q0VAA5 305 aa1.38□□□□□ -2.19
HMGB1P27-201ENST00000431429 FOXF1Q12946 379 aa1.38□□□□□ -2.19
HMGB1P27-201ENST00000431429 POU6F1Q14863 301 aa1.38□□□□□ -2.19
HMGB1P27-201ENST00000431429 CCSMST1Q4G0I0 132 aa1.38□□□□□ -2.19
HMGB1P27-201ENST00000431429 AGTRAPQ6RW13 159 aa1.38□□□□□ -2.19
HMGB1P27-201ENST00000431429 TMPPEQ6ZT21 453 aa1.38□□□□□ -2.19
HMGB1P27-201ENST00000431429 KRTAP13-1Q8IUC0 172 aa1.38□□□□□ -2.19
HMGB1P27-201ENST00000431429 MFSD8Q8NHS3 518 aa1.38□□□□□ -2.19
HMGB1P27-201ENST00000431429 GPR119Q8TDV5 335 aa1.38□□□□□ -2.19
HMGB1P27-201ENST00000431429 Q8WTZ3 238 aa1.38□□□□□ -2.19
HMGB1P27-201ENST00000431429 CYGBQ8WWM9 190 aa1.38□□□□□ -2.19
HMGB1P27-201ENST00000431429 RAB8BQ92930 207 aa1.38□□□□□ -2.19
HMGB1P27-201ENST00000431429 ISOC1Q96CN7 298 aa1.38□□□□□ -2.19
HMGB1P27-201ENST00000431429 CPNE2Q96FN4 548 aaPredicted RBP1.38□□□□□ -2.19
HMGB1P27-201ENST00000431429 PSORS1C2Q9UIG4 136 aa1.38□□□□□ -2.19
HMGB1P27-201ENST00000431429 FBXO5Q9UKT4 447 aa1.38□□□□□ -2.19
HMGB1P27-201ENST00000431429 ALPK2Q86TB3 2170 aa1.38□□□□□ -2.19
HMGB1P27-201ENST00000431429 RYR3Q15413 4870 aa1.38□□□□□ -2.19
HMGB1P27-201ENST00000431429 DOCK4Q8N1I0 1966 aa1.38□□□□□ -2.19
HMGB1P27-201ENST00000431429 CPAMD8Q8IZJ3 1885 aa1.37□□□□□ -2.19
HMGB1P27-201ENST00000431429 COL7A1Q02388 2944 aa1.37□□□□□ -2.19
HMGB1P27-201ENST00000431429 TRAV8-1A0A0A6YYK1 113 aa1.37□□□□□ -2.19
HMGB1P27-201ENST00000431429 SDHAF1A6NFY7 115 aa1.37□□□□□ -2.19
HMGB1P27-201ENST00000431429 M0R381 172 aa1.37□□□□□ -2.19
HMGB1P27-201ENST00000431429 MRASO14807 208 aa1.37□□□□□ -2.19
HMGB1P27-201ENST00000431429 CST8O60676 142 aa1.37□□□□□ -2.19
HMGB1P27-201ENST00000431429 MRPL33O75394 65 aaKnown RBP1.37□□□□□ -2.19
HMGB1P27-201ENST00000431429 PSMG1O95456 288 aa1.37□□□□□ -2.19
HMGB1P27-201ENST00000431429 IFNA6P05013 189 aa1.37□□□□□ -2.19
HMGB1P27-201ENST00000431429 CRYBB3P26998 211 aa1.37□□□□□ -2.19
HMGB1P27-201ENST00000431429 SERPINB1P30740 379 aa1.37□□□□□ -2.19
HMGB1P27-201ENST00000431429 GZMMP51124 257 aa1.37□□□□□ -2.19
HMGB1P27-201ENST00000431429 TBPL1P62380 186 aa1.37□□□□□ -2.19
HMGB1P27-201ENST00000431429 ZNF117Q03924 483 aa1.37□□□□□ -2.19
HMGB1P27-201ENST00000431429 LGALS9BQ3B8N2 356 aa1.37□□□□□ -2.19
HMGB1P27-201ENST00000431429 LGALS9CQ6DKI2 356 aa1.37□□□□□ -2.19
HMGB1P27-201ENST00000431429 TNFAIP8L2Q6P589 184 aaPredicted RBP1.37□□□□□ -2.19
HMGB1P27-201ENST00000431429 ATP5L2Q7Z4Y8 100 aa1.37□□□□□ -2.19
HMGB1P27-201ENST00000431429 NDUFA11Q86Y39 141 aa1.37□□□□□ -2.19
HMGB1P27-201ENST00000431429 MSRB3Q8IXL7 192 aa1.37□□□□□ -2.19
HMGB1P27-201ENST00000431429 C1orf174Q8IYL3 243 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms