RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 IL17RELQ6ZVW7 336 aa8.21□□□□□ -1.1
CLTCL1-202ENST00000427926 GGNQ86UU5 652 aa8.21□□□□□ -1.1
CLTCL1-202ENST00000427926 SNRNP200O75643 2136 aaKnown RBP8.21□□□□□ -1.1
CLTCL1-202ENST00000427926 FOXA3P55318 350 aaPredicted RBP8.21□□□□□ -1.1
CLTCL1-202ENST00000427926 FCN3O75636 299 aa8.2□□□□□ -1.1
CLTCL1-202ENST00000427926 C5orf64Q2M2E5 130 aa8.2□□□□□ -1.1
CLTCL1-202ENST00000427926 TCF23Q7RTU1 214 aa8.2□□□□□ -1.1
CLTCL1-202ENST00000427926 COL6A6A6NMZ7 2263 aa8.2□□□□□ -1.1
CLTCL1-202ENST00000427926 TRBV6-7A0A0A0MS04 114 aa8.2□□□□□ -1.1
CLTCL1-202ENST00000427926 TRBV9A0A0B4J1U6 114 aa8.2□□□□□ -1.1
CLTCL1-202ENST00000427926 DPRXA6NFQ7 191 aa8.2□□□□□ -1.1
CLTCL1-202ENST00000427926 E7EQL1 145 aa8.2□□□□□ -1.1
CLTCL1-202ENST00000427926 SELLP14151 372 aa8.2□□□□□ -1.1
CLTCL1-202ENST00000427926 LINC00158P58513 81 aa8.2□□□□□ -1.1
CLTCL1-202ENST00000427926 NABP1Q96AH0 204 aa8.2□□□□□ -1.1
CLTCL1-202ENST00000427926 AICDAQ9GZX7 198 aa8.2□□□□□ -1.1
CLTCL1-202ENST00000427926 CACNA1IQ9P0X4 2223 aa8.2□□□□□ -1.1
CLTCL1-202ENST00000427926 DOPEY2Q9Y3R5 2298 aa8.2□□□□□ -1.1
CLTCL1-202ENST00000427926 LINC00271P0C7V0 271 aa8.2□□□□□ -1.1
CLTCL1-202ENST00000427926 UCP1P25874 307 aa8.2□□□□□ -1.1
CLTCL1-202ENST00000427926 ZNF324BQ6AW86 544 aaPredicted RBP8.2□□□□□ -1.1
CLTCL1-202ENST00000427926 PRB1P04280 392 aa8.2□□□□□ -1.1
CLTCL1-202ENST00000427926 NDPQ00604 133 aa8.2□□□□□ -1.1
CLTCL1-202ENST00000427926 Q5BKY6 102 aa8.2□□□□□ -1.1
CLTCL1-202ENST00000427926 RIF1Q5UIP0 2472 aaKnown RBP8.2□□□□□ -1.1
CLTCL1-202ENST00000427926 AKAP6Q13023 2319 aa8.2□□□□□ -1.1
CLTCL1-202ENST00000427926 FOXG1P55316 489 aaPredicted RBP8.19□□□□□ -1.1
CLTCL1-202ENST00000427926 NHLRC3Q5JS37 347 aa8.19□□□□□ -1.1
CLTCL1-202ENST00000427926 ZNF474Q6S9Z5 364 aaPredicted RBP8.19□□□□□ -1.1
CLTCL1-202ENST00000427926 ORMDL3Q8N138 153 aa8.19□□□□□ -1.1
CLTCL1-202ENST00000427926 FAM131CQ96AQ9 280 aa8.19□□□□□ -1.1
CLTCL1-202ENST00000427926 SCN5AQ14524 2016 aa8.19□□□□□ -1.1
CLTCL1-202ENST00000427926 APOHP02749 345 aaPredicted RBP8.19□□□□□ -1.1
CLTCL1-202ENST00000427926 RPL15P61313 204 aaKnown RBP8.19□□□□□ -1.1
CLTCL1-202ENST00000427926 PMCHL2Q9BQD1 86 aa8.19□□□□□ -1.1
CLTCL1-202ENST00000427926 SIP14410 1827 aa8.19□□□□□ -1.1
CLTCL1-202ENST00000427926 BUB1B-PAK6H3BSN5 160 aa8.19□□□□□ -1.1
CLTCL1-202ENST00000427926 APOMO95445 188 aa8.19□□□□□ -1.1
CLTCL1-202ENST00000427926 SPATA45Q537H7 98 aa8.19□□□□□ -1.1
CLTCL1-202ENST00000427926 OR5A1Q8NGJ0 315 aa8.19□□□□□ -1.1
CLTCL1-202ENST00000427926 PDCD11Q14690 1871 aaKnown RBP8.19□□□□□ -1.1
CLTCL1-202ENST00000427926 CYSLTR1Q9Y271 337 aa8.19□□□□□ -1.1
CLTCL1-202ENST00000427926 TRAV12-3A0A0B4J271 114 aa8.19□□□□□ -1.1
CLTCL1-202ENST00000427926 IGHV1-69DA0A0B4J2H0 117 aa8.19□□□□□ -1.1
CLTCL1-202ENST00000427926 SRRM4A7MD48 611 aaKnown RBP8.19□□□□□ -1.1
CLTCL1-202ENST00000427926 IGHV1-69P01742 117 aa8.19□□□□□ -1.1
CLTCL1-202ENST00000427926 GFI1BQ5VTD9 330 aa8.19□□□□□ -1.1
CLTCL1-202ENST00000427926 SLC25A34Q6PIV7 304 aa8.19□□□□□ -1.1
CLTCL1-202ENST00000427926 C9orf139Q6ZV77 190 aa8.19□□□□□ -1.1
CLTCL1-202ENST00000427926 RNF182Q8N6D2 247 aa8.19□□□□□ -1.1
CLTCL1-202ENST00000427926 RMI2Q96E14 147 aa8.19□□□□□ -1.1
CLTCL1-202ENST00000427926 SPXQ9BT56 116 aa8.19□□□□□ -1.1
CLTCL1-202ENST00000427926 RHPN1-AS1Q9BWJ2 59 aa8.19□□□□□ -1.1
CLTCL1-202ENST00000427926 SCN2AQ99250 2005 aa8.18□□□□□ -1.1
CLTCL1-202ENST00000427926 TCF15Q12870 199 aa8.18□□□□□ -1.1
CLTCL1-202ENST00000427926 FLVCR1-AS1Q8TAF5 88 aa8.18□□□□□ -1.1
CLTCL1-202ENST00000427926 FGFBP3Q8TAT2 258 aa8.18□□□□□ -1.1
CLTCL1-202ENST00000427926 DLX4Q92988 240 aaPredicted RBP8.18□□□□□ -1.1
CLTCL1-202ENST00000427926 DAZ1Q9NQZ3 744 aaKnown RBP8.18□□□□□ -1.1
CLTCL1-202ENST00000427926 MDC1Q14676 2089 aaKnown RBP8.18□□□□□ -1.1
CLTCL1-202ENST00000427926 SHISA3A0PJX4 238 aa8.18□□□□□ -1.1
CLTCL1-202ENST00000427926 OVOL3O00110 214 aa8.18□□□□□ -1.1
CLTCL1-202ENST00000427926 TSPAN13O95857 204 aa8.18□□□□□ -1.1
CLTCL1-202ENST00000427926 PPIFP30405 207 aaKnown RBP8.18□□□□□ -1.1
CLTCL1-202ENST00000427926 GNG5P63218 68 aa8.18□□□□□ -1.1
CLTCL1-202ENST00000427926 C1orf122Q6ZSJ8 110 aa8.18□□□□□ -1.1
CLTCL1-202ENST00000427926 GLRX5Q86SX6 157 aa8.18□□□□□ -1.1
CLTCL1-202ENST00000427926 NDUFA3O95167 84 aa8.18□□□□□ -1.1
CLTCL1-202ENST00000427926 C17orf82Q86X59 251 aaPredicted RBP8.18□□□□□ -1.1
CLTCL1-202ENST00000427926 NPDC1Q9NQX5 325 aaPredicted RBP8.18□□□□□ -1.1
CLTCL1-202ENST00000427926 ANKRD36A6QL64 1941 aa8.18□□□□□ -1.1
CLTCL1-202ENST00000427926 NDUFS6O75380 124 aaKnown RBP8.18□□□□□ -1.1
CLTCL1-202ENST00000427926 SOD3P08294 240 aa8.18□□□□□ -1.1
CLTCL1-202ENST00000427926 PRTN3P24158 256 aa8.18□□□□□ -1.1
CLTCL1-202ENST00000427926 DUTP33316 252 aaKnown RBP8.18□□□□□ -1.1
CLTCL1-202ENST00000427926 DEFB131AP59861 70 aa8.18□□□□□ -1.1
CLTCL1-202ENST00000427926 RARRES2Q99969 163 aa8.18□□□□□ -1.1
CLTCL1-202ENST00000427926 PSG8Q9UQ74 426 aa8.18□□□□□ -1.1
CLTCL1-202ENST00000427926 CCDC88CQ9P219 2028 aa8.18□□□□□ -1.1
CLTCL1-202ENST00000427926 NYNRINQ9P2P1 1898 aaKnown RBP8.17□□□□□ -1.1
CLTCL1-202ENST00000427926 UBE2E1P51965 193 aa8.17□□□□□ -1.1
CLTCL1-202ENST00000427926 PSG1P11464 419 aa8.17□□□□□ -1.1
CLTCL1-202ENST00000427926 H2BFSP57053 126 aa8.17□□□□□ -1.1
CLTCL1-202ENST00000427926 UBE2CO00762 179 aa8.17□□□□□ -1.1
CLTCL1-202ENST00000427926 MRPL16Q9NX20 251 aaKnown RBP8.17□□□□□ -1.1
CLTCL1-202ENST00000427926 THADAQ6YHU6 1953 aa8.17□□□□□ -1.1
CLTCL1-202ENST00000427926 SRSF4Q08170 494 aaKnown RBP8.17□□□□□ -1.1
CLTCL1-202ENST00000427926 MST1LQ2TV78 715 aa8.17□□□□□ -1.1
CLTCL1-202ENST00000427926 LINC00114Q6XXX2 140 aa8.17□□□□□ -1.1
CLTCL1-202ENST00000427926 PAQR4Q8N4S7 273 aaPredicted RBP8.17□□□□□ -1.1
CLTCL1-202ENST00000427926 DERL1Q9BUN8 251 aa8.17□□□□□ -1.1
CLTCL1-202ENST00000427926 A0A1B0GTI1 187 aa8.16□□□□□ -1.1
CLTCL1-202ENST00000427926 SCO2A0A1W2PP80 73 aa8.16□□□□□ -1.1
CLTCL1-202ENST00000427926 GAGE1Q13065 139 aa8.16□□□□□ -1.1
CLTCL1-202ENST00000427926 TTC9CQ8N5M4 171 aa8.16□□□□□ -1.1
CLTCL1-202ENST00000427926 SMIM13P0DJ93 91 aa8.16□□□□□ -1.1
CLTCL1-202ENST00000427926 SRSF1Q07955 248 aaKnown RBP eCLIP8.16□□□□□ -1.1
CLTCL1-202ENST00000427926 C10orf55Q5SWW7 151 aa8.16□□□□□ -1.1
CLTCL1-202ENST00000427926 IGFL3Q6UXB1 125 aa8.16□□□□□ -1.1
CLTCL1-202ENST00000427926 SLC25A48Q6ZT89 311 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms