RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 SAA2P0DJI9 122 aaPredicted RBP4.75□□□□□ -1.65
HERC4-206ENST00000427635 IGFBP2P18065 325 aa4.75□□□□□ -1.65
HERC4-206ENST00000427635 CSRP3P50461 194 aa4.75□□□□□ -1.65
HERC4-206ENST00000427635 FOXL1Q12952 345 aa4.75□□□□□ -1.65
HERC4-206ENST00000427635 TMEM187Q14656 261 aa4.75□□□□□ -1.65
HERC4-206ENST00000427635 MST1LQ2TV78 715 aa4.75□□□□□ -1.65
HERC4-206ENST00000427635 Q96M66 194 aa4.75□□□□□ -1.65
HERC4-206ENST00000427635 PSMG3Q9BT73 122 aaPredicted RBP4.75□□□□□ -1.65
HERC4-206ENST00000427635 BPESC1Q9GZL8 116 aa4.75□□□□□ -1.65
HERC4-206ENST00000427635 TRAV2A0A0B4J234 112 aa4.75□□□□□ -1.65
HERC4-206ENST00000427635 SMIM9A6NGZ8 99 aa4.75□□□□□ -1.65
HERC4-206ENST00000427635 F2Z2F3 143 aa4.75□□□□□ -1.65
HERC4-206ENST00000427635 MEF2BQ02080 365 aaPredicted RBP4.75□□□□□ -1.65
HERC4-206ENST00000427635 ORMDL3Q8N138 153 aa4.75□□□□□ -1.65
HERC4-206ENST00000427635 WIPF2Q8TF74 440 aaPredicted RBP4.75□□□□□ -1.65
HERC4-206ENST00000427635 PIEZO1Q92508 2521 aa4.75□□□□□ -1.65
HERC4-206ENST00000427635 IGLV1-36A0A0B4J1U3 117 aa4.75□□□□□ -1.65
HERC4-206ENST00000427635 NDUFS5O43920 106 aa4.75□□□□□ -1.65
HERC4-206ENST00000427635 LGALS1P09382 135 aaKnown RBP4.75□□□□□ -1.65
HERC4-206ENST00000427635 SUPT4H1P63272 117 aaKnown RBP4.75□□□□□ -1.65
HERC4-206ENST00000427635 RUNX1Q01196 453 aa4.75□□□□□ -1.65
HERC4-206ENST00000427635 C1orf195Q5TG92 126 aa4.75□□□□□ -1.65
HERC4-206ENST00000427635 C1QTNF5Q9BXJ0 243 aa4.75□□□□□ -1.65
HERC4-206ENST00000427635 MUC21A0A0G2JKD1 596 aa4.75□□□□□ -1.65
HERC4-206ENST00000427635 MUC21A0A140T8X8 626 aa4.75□□□□□ -1.65
HERC4-206ENST00000427635 A0A1B0GUS0 222 aa4.75□□□□□ -1.65
HERC4-206ENST00000427635 C12orf77C9JDV5 145 aa4.75□□□□□ -1.65
HERC4-206ENST00000427635 K7EP13 123 aa4.75□□□□□ -1.65
HERC4-206ENST00000427635 LEPROTO15243 131 aa4.75□□□□□ -1.65
HERC4-206ENST00000427635 NDUFC2O95298 119 aa4.75□□□□□ -1.65
HERC4-206ENST00000427635 C15orf32Q32M92 178 aa4.75□□□□□ -1.65
HERC4-206ENST00000427635 TEX43Q6ZNM6 134 aa4.75□□□□□ -1.65
HERC4-206ENST00000427635 TMEM190Q8WZ59 177 aa4.75□□□□□ -1.65
HERC4-206ENST00000427635 CNTRLQ7Z7A1 2325 aa4.75□□□□□ -1.65
HERC4-206ENST00000427635 M0R2P5 195 aa4.74□□□□□ -1.65
HERC4-206ENST00000427635 CD160O95971 181 aa4.74□□□□□ -1.65
HERC4-206ENST00000427635 RFLNBQ8N5W9 214 aa4.74□□□□□ -1.65
HERC4-206ENST00000427635 CREBBPQ92793 2442 aa4.74□□□□□ -1.65
HERC4-206ENST00000427635 TMEM178BH3BS89 294 aa4.74□□□□□ -1.65
HERC4-206ENST00000427635 WIPF1O43516 503 aa4.74□□□□□ -1.65
HERC4-206ENST00000427635 HSPB1P04792 205 aaKnown RBP4.74□□□□□ -1.65
HERC4-206ENST00000427635 ZFP36L1Q07352 338 aaKnown RBP4.74□□□□□ -1.65
HERC4-206ENST00000427635 MAPK1IP1LQ8NDC0 245 aa4.74□□□□□ -1.65
HERC4-206ENST00000427635 DNAJC30Q96LL9 226 aa4.74□□□□□ -1.65
HERC4-206ENST00000427635 RNF5Q99942 180 aa4.74□□□□□ -1.65
HERC4-206ENST00000427635 SELENOKQ9Y6D0 94 aa4.74□□□□□ -1.65
HERC4-206ENST00000427635 MPTX1A8MV57 137 aa4.74□□□□□ -1.65
HERC4-206ENST00000427635 CRLF1O75462 422 aa4.74□□□□□ -1.65
HERC4-206ENST00000427635 CCL18P55774 89 aa4.74□□□□□ -1.65
HERC4-206ENST00000427635 ATXN8Q156A1 80 aa4.74□□□□□ -1.65
HERC4-206ENST00000427635 ST6GAL2Q96JF0 529 aa4.74□□□□□ -1.65
HERC4-206ENST00000427635 LINC00477Q96M19 166 aa4.74□□□□□ -1.65
HERC4-206ENST00000427635 MARF1Q9Y4F3 1742 aaKnown RBP4.74□□□□□ -1.65
HERC4-206ENST00000427635 KIF13BQ9NQT8 1826 aa4.74□□□□□ -1.65
HERC4-206ENST00000427635 SPNP16150 400 aa4.74□□□□□ -1.65
HERC4-206ENST00000427635 SYNJ2BPP57105 145 aa4.74□□□□□ -1.65
HERC4-206ENST00000427635 SMIM2Q9BVW6 85 aa4.74□□□□□ -1.65
HERC4-206ENST00000427635 REG4Q9BYZ8 158 aa4.74□□□□□ -1.65
HERC4-206ENST00000427635 STRCP1A6NGW2 1772 aa4.74□□□□□ -1.65
HERC4-206ENST00000427635 TRBV25-1A0A075B6N4 114 aa4.74□□□□□ -1.65
HERC4-206ENST00000427635 CENPVL1A0A0U1RR11 272 aa4.74□□□□□ -1.65
HERC4-206ENST00000427635 CENPVL3A0A0U1RRI6 287 aa4.74□□□□□ -1.65
HERC4-206ENST00000427635 UTF1Q5T230 341 aa4.74□□□□□ -1.65
HERC4-206ENST00000427635 IMMP1LQ96LU5 166 aa4.74□□□□□ -1.65
HERC4-206ENST00000427635 MARVELD1Q9BSK0 173 aa4.74□□□□□ -1.65
HERC4-206ENST00000427635 SSBP4Q9BWG4 385 aaPredicted RBP4.74□□□□□ -1.65
HERC4-206ENST00000427635 MIA3Q5JRA6 1907 aa4.74□□□□□ -1.65
HERC4-206ENST00000427635 EFNA2O43921 213 aa4.73□□□□□ -1.65
HERC4-206ENST00000427635 CRYGSP22914 178 aa4.73□□□□□ -1.65
HERC4-206ENST00000427635 TMEM155Q4W5P6 130 aa4.73□□□□□ -1.65
HERC4-206ENST00000427635 CD200R1LQ6Q8B3 271 aa4.73□□□□□ -1.65
HERC4-206ENST00000427635 ZNF329Q86UD4 541 aa4.73□□□□□ -1.65
HERC4-206ENST00000427635 DERL1Q9BUN8 251 aa4.73□□□□□ -1.65
HERC4-206ENST00000427635 ATAD5Q96QE3 1844 aa4.73□□□□□ -1.65
HERC4-206ENST00000427635 IGKV1-8A0A0C4DH67 115 aa4.73□□□□□ -1.65
HERC4-206ENST00000427635 ESDP10768 282 aa4.73□□□□□ -1.65
HERC4-206ENST00000427635 CFHR3Q02985 330 aa4.73□□□□□ -1.65
HERC4-206ENST00000427635 ZNF876PQ49A33 203 aa4.73□□□□□ -1.65
HERC4-206ENST00000427635 GFI1BQ5VTD9 330 aa4.73□□□□□ -1.65
HERC4-206ENST00000427635 C9orf139Q6ZV77 190 aa4.73□□□□□ -1.65
HERC4-206ENST00000427635 NABP1Q96AH0 204 aa4.73□□□□□ -1.65
HERC4-206ENST00000427635 TRPM6Q9BX84 2022 aa4.73□□□□□ -1.65
HERC4-206ENST00000427635 A0A0G2JK05 382 aa4.73□□□□□ -1.65
HERC4-206ENST00000427635 IGLV3-21P80748 117 aaPredicted RBP4.73□□□□□ -1.65
HERC4-206ENST00000427635 UBE2V2Q15819 145 aa4.73□□□□□ -1.65
HERC4-206ENST00000427635 ZCCHC24Q8N2G6 241 aaKnown RBP4.73□□□□□ -1.65
HERC4-206ENST00000427635 BRWD3Q6RI45 1802 aa4.73□□□□□ -1.65
HERC4-206ENST00000427635 A0A087WV48 116 aa4.73□□□□□ -1.65
HERC4-206ENST00000427635 IGHV1-3A0A0C4DH29 117 aa4.73□□□□□ -1.65
HERC4-206ENST00000427635 J3KT08 172 aa4.73□□□□□ -1.65
HERC4-206ENST00000427635 IGHV1-8P0DP01 117 aa4.73□□□□□ -1.65
HERC4-206ENST00000427635 DEFB131AP59861 70 aa4.73□□□□□ -1.65
HERC4-206ENST00000427635 UBE2V1Q13404 147 aa4.73□□□□□ -1.65
HERC4-206ENST00000427635 TMEM200BQ69YZ2 307 aa4.73□□□□□ -1.65
HERC4-206ENST00000427635 ZNF114Q8NC26 417 aa4.73□□□□□ -1.65
HERC4-206ENST00000427635 TNS1Q9HBL0 1735 aaKnown RBP4.73□□□□□ -1.65
HERC4-206ENST00000427635 PATJQ8NI35 1801 aa4.73□□□□□ -1.65
HERC4-206ENST00000427635 NTN3O00634 580 aaPredicted RBP4.73□□□□□ -1.65
HERC4-206ENST00000427635 CGAP01215 116 aa4.73□□□□□ -1.65
HERC4-206ENST00000427635 RPL15P61313 204 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms