RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 RCHY1Q96PM5 261 aa13.8□□□□□ -0.2
SYNGAP1-202ENST00000418600 LOC102724200A0A096LPH7 203 aaPredicted RBP13.8□□□□□ -0.2
SYNGAP1-202ENST00000418600 TRAV21A0A0B4J279 112 aa13.8□□□□□ -0.2
SYNGAP1-202ENST00000418600 SLC25A20O43772 301 aa13.8□□□□□ -0.2
SYNGAP1-202ENST00000418600 TTC32Q5I0X7 151 aa13.8□□□□□ -0.2
SYNGAP1-202ENST00000418600 RHPN1-AS1Q9BWJ2 59 aa13.8□□□□□ -0.2
SYNGAP1-202ENST00000418600 NRN1Q9NPD7 142 aa13.8□□□□□ -0.2
SYNGAP1-202ENST00000418600 CACNA1CQ13936 2221 aa13.8□□□□□ -0.2
SYNGAP1-202ENST00000418600 CA1P00915 261 aaPredicted RBP13.8□□□□□ -0.2
SYNGAP1-202ENST00000418600 ELANEP08246 267 aa13.8□□□□□ -0.2
SYNGAP1-202ENST00000418600 HOXA5P20719 270 aa13.8□□□□□ -0.2
SYNGAP1-202ENST00000418600 FMC1Q96HJ9 113 aa13.8□□□□□ -0.2
SYNGAP1-202ENST00000418600 ARL6IP6Q8N6S5 226 aa13.79□□□□□ -0.2
SYNGAP1-202ENST00000418600 RAMP3O60896 148 aa13.79□□□□□ -0.2
SYNGAP1-202ENST00000418600 TMEM170BQ5T4T1 132 aa13.79□□□□□ -0.2
SYNGAP1-202ENST00000418600 FAM90A9PA6NNJ1 464 aa13.79□□□□□ -0.2
SYNGAP1-202ENST00000418600 PGPEP1Q9NXJ5 209 aa13.79□□□□□ -0.2
SYNGAP1-202ENST00000418600 HELZP42694 1942 aaKnown RBP13.79□□□□□ -0.2
SYNGAP1-202ENST00000418600 FANCMQ8IYD8 2048 aa13.79□□□□□ -0.2
SYNGAP1-202ENST00000418600 KIF26AQ9ULI4 1882 aaPredicted RBP13.79□□□□□ -0.2
SYNGAP1-202ENST00000418600 CD5LO43866 347 aa13.79□□□□□ -0.2
SYNGAP1-202ENST00000418600 ZNF79Q15937 498 aa13.79□□□□□ -0.2
SYNGAP1-202ENST00000418600 SIGLEC9Q9Y336 463 aa13.78□□□□□ -0.2
SYNGAP1-202ENST00000418600 MTURNQ8N3F0 131 aa13.78□□□□□ -0.2
SYNGAP1-202ENST00000418600 A0A087WX48 190 aa13.78□□□□□ -0.2
SYNGAP1-202ENST00000418600 F5H768 121 aa13.78□□□□□ -0.2
SYNGAP1-202ENST00000418600 DEFB130BP0DP73 79 aa13.78□□□□□ -0.2
SYNGAP1-202ENST00000418600 DEFB130AP0DP74 79 aa13.78□□□□□ -0.2
SYNGAP1-202ENST00000418600 RARRES2Q99969 163 aa13.78□□□□□ -0.2
SYNGAP1-202ENST00000418600 CHCHD5Q9BSY4 110 aa13.78□□□□□ -0.2
SYNGAP1-202ENST00000418600 PARLQ9H300 379 aa13.78□□□□□ -0.2
SYNGAP1-202ENST00000418600 SRIP30626 198 aa13.78□□□□□ -0.2
SYNGAP1-202ENST00000418600 OR10W1Q8NGF6 305 aa13.78□□□□□ -0.2
SYNGAP1-202ENST00000418600 Q9H3A6 140 aa13.78□□□□□ -0.2
SYNGAP1-202ENST00000418600 CCL24O00175 119 aa13.77□□□□□ -0.2
SYNGAP1-202ENST00000418600 OR10J3Q5JRS4 329 aa13.77□□□□□ -0.2
SYNGAP1-202ENST00000418600 TEX36Q5VZQ5 186 aa13.77□□□□□ -0.2
SYNGAP1-202ENST00000418600 VENTXO95231 258 aa13.77□□□□□ -0.2
SYNGAP1-202ENST00000418600 IGHV2-70P01814 119 aa13.77□□□□□ -0.2
SYNGAP1-202ENST00000418600 NAT1P18440 290 aa13.77□□□□□ -0.21
SYNGAP1-202ENST00000418600 RP1P56715 2156 aa13.77□□□□□ -0.21
SYNGAP1-202ENST00000418600 SFRP2Q96HF1 295 aa13.77□□□□□ -0.21
SYNGAP1-202ENST00000418600 OTORQ9NRC9 128 aa13.77□□□□□ -0.21
SYNGAP1-202ENST00000418600 SPTBP11277 2137 aa13.77□□□□□ -0.21
SYNGAP1-202ENST00000418600 CD8AP01732 235 aa13.77□□□□□ -0.21
SYNGAP1-202ENST00000418600 DEFB131AP59861 70 aa13.77□□□□□ -0.21
SYNGAP1-202ENST00000418600 RPL15P61313 204 aaKnown RBP13.77□□□□□ -0.21
SYNGAP1-202ENST00000418600 KLF17Q5JT82 389 aaPredicted RBP13.77□□□□□ -0.21
SYNGAP1-202ENST00000418600 BRWD1Q9NSI6 2320 aa13.76□□□□□ -0.21
SYNGAP1-202ENST00000418600 TRAV9-2A0A087WT02 112 aa13.76□□□□□ -0.21
SYNGAP1-202ENST00000418600 TRAV8-6A0A0B4J262 113 aa13.76□□□□□ -0.21
SYNGAP1-202ENST00000418600 IGKV1-12A0A0C4DH73 117 aa13.76□□□□□ -0.21
SYNGAP1-202ENST00000418600 IGKV1D-12P01611 117 aa13.76□□□□□ -0.21
SYNGAP1-202ENST00000418600 FBLIM1Q8WUP2 373 aa13.76□□□□□ -0.21
SYNGAP1-202ENST00000418600 PPP1R3EQ9H7J1 279 aa13.76□□□□□ -0.21
SYNGAP1-202ENST00000418600 IGKV1-27A0A075B6S5 117 aa13.76□□□□□ -0.21
SYNGAP1-202ENST00000418600 NHLRC3Q5JS37 347 aa13.76□□□□□ -0.21
SYNGAP1-202ENST00000418600 ZNF414Q96IQ9 312 aa13.76□□□□□ -0.21
SYNGAP1-202ENST00000418600 C2orf16Q68DN1 1984 aa13.76□□□□□ -0.21
SYNGAP1-202ENST00000418600 ARHGEF17Q96PE2 2063 aaPredicted RBP13.76□□□□□ -0.21
SYNGAP1-202ENST00000418600 SEC16AO15027 2179 aa13.76□□□□□ -0.21
SYNGAP1-202ENST00000418600 FCN3O75636 299 aa13.76□□□□□ -0.21
SYNGAP1-202ENST00000418600 CGAP01215 116 aa13.76□□□□□ -0.21
SYNGAP1-202ENST00000418600 C10orf55Q5SWW7 151 aa13.76□□□□□ -0.21
SYNGAP1-202ENST00000418600 MPTX1A8MV57 137 aa13.76□□□□□ -0.21
SYNGAP1-202ENST00000418600 C19orf84I3L1E1 186 aa13.76□□□□□ -0.21
SYNGAP1-202ENST00000418600 NPCDR1Q9BY65 106 aa13.76□□□□□ -0.21
SYNGAP1-202ENST00000418600 SPRY4Q9C004 299 aa13.76□□□□□ -0.21
SYNGAP1-202ENST00000418600 SCGB3A1Q96QR1 104 aa13.75□□□□□ -0.21
SYNGAP1-202ENST00000418600 NPDC1Q9NQX5 325 aaPredicted RBP13.75□□□□□ -0.21
SYNGAP1-202ENST00000418600 IGLV3-9A0A075B6K5 115 aa13.75□□□□□ -0.21
SYNGAP1-202ENST00000418600 TSPAN13O95857 204 aa13.75□□□□□ -0.21
SYNGAP1-202ENST00000418600 CLPSL1A2RUU4 121 aa13.75□□□□□ -0.21
SYNGAP1-202ENST00000418600 SMIM13P0DJ93 91 aa13.75□□□□□ -0.21
SYNGAP1-202ENST00000418600 FBLN7Q53RD9 439 aa13.75□□□□□ -0.21
SYNGAP1-202ENST00000418600 EIF3GO75821 320 aaKnown RBP eCLIP13.75□□□□□ -0.21
SYNGAP1-202ENST00000418600 AMBPP02760 352 aa13.75□□□□□ -0.21
SYNGAP1-202ENST00000418600 UCP1P25874 307 aa13.75□□□□□ -0.21
SYNGAP1-202ENST00000418600 IGHV3-53P01767 116 aa13.75□□□□□ -0.21
SYNGAP1-202ENST00000418600 IGHV4-38-2P0DP08 117 aa13.75□□□□□ -0.21
SYNGAP1-202ENST00000418600 LOXP28300 417 aaPredicted RBP13.75□□□□□ -0.21
SYNGAP1-202ENST00000418600 Q6P435 159 aa13.75□□□□□ -0.21
SYNGAP1-202ENST00000418600 TMEM190Q8WZ59 177 aa13.75□□□□□ -0.21
SYNGAP1-202ENST00000418600 CENPWQ5EE01 88 aa13.74□□□□□ -0.21
SYNGAP1-202ENST00000418600 CD200R1LQ6Q8B3 271 aa13.74□□□□□ -0.21
SYNGAP1-202ENST00000418600 ADAMTS9Q9P2N4 1935 aa13.74□□□□□ -0.21
SYNGAP1-202ENST00000418600 IGKV1D-13A0A0B4J2D9 117 aa13.74□□□□□ -0.21
SYNGAP1-202ENST00000418600 TRBV7-9A0A0J9YWB2 115 aa13.74□□□□□ -0.21
SYNGAP1-202ENST00000418600 CGB3P0DN86 165 aa13.74□□□□□ -0.21
SYNGAP1-202ENST00000418600 IGKV1-13P0DP09 117 aa13.74□□□□□ -0.21
SYNGAP1-202ENST00000418600 GATA2P23769 480 aaPredicted RBP13.74□□□□□ -0.21
SYNGAP1-202ENST00000418600 LINC00469Q8N7U9 141 aa13.74□□□□□ -0.21
SYNGAP1-202ENST00000418600 TPRP12270 2363 aaKnown RBP13.74□□□□□ -0.21
SYNGAP1-202ENST00000418600 ESPL1Q14674 2120 aa13.74□□□□□ -0.21
SYNGAP1-202ENST00000418600 COQ2Q96H96 371 aa13.74□□□□□ -0.21
SYNGAP1-202ENST00000418600 ASCL2Q99929 193 aa13.74□□□□□ -0.21
SYNGAP1-202ENST00000418600 FGF16O43320 207 aa13.74□□□□□ -0.21
SYNGAP1-202ENST00000418600 Q6ZR03 302 aa13.74□□□□□ -0.21
SYNGAP1-202ENST00000418600 IL17DQ8TAD2 202 aa13.74□□□□□ -0.21
SYNGAP1-202ENST00000418600 CLDN16Q9Y5I7 305 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms