RNA–Protein interactions for RNA: ENST00000415361.6

CTNND1-206, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-206ENST00000415361 PHLDA1Q8WV24 401 aaPredicted RBP6.99□□□□□ -1.29
CTNND1-206ENST00000415361 PARD6GQ9BYG4 376 aaPredicted RBP6.99□□□□□ -1.29
CTNND1-206ENST00000415361 KIF26AQ9ULI4 1882 aaPredicted RBP6.99□□□□□ -1.29
CTNND1-206ENST00000415361 J3QKU1 62 aa6.98□□□□□ -1.29
CTNND1-206ENST00000415361 DDTP30046 118 aa6.98□□□□□ -1.29
CTNND1-206ENST00000415361 OTX1P32242 354 aaPredicted RBP6.98□□□□□ -1.29
CTNND1-206ENST00000415361 ATP5G3P48201 142 aa6.98□□□□□ -1.29
CTNND1-206ENST00000415361 TEX38Q6PEX7 206 aa6.98□□□□□ -1.29
CTNND1-206ENST00000415361 C9orf139Q6ZV77 190 aa6.98□□□□□ -1.29
CTNND1-206ENST00000415361 C18orf15Q96N68 181 aa6.98□□□□□ -1.29
CTNND1-206ENST00000415361 DMRT1Q9Y5R6 373 aa6.98□□□□□ -1.29
CTNND1-206ENST00000415361 ZNF407Q9C0G0 2248 aa6.98□□□□□ -1.29
CTNND1-206ENST00000415361 IGHG3P01860 377 aa6.98□□□□□ -1.29
CTNND1-206ENST00000415361 C2orf16Q68DN1 1984 aa6.98□□□□□ -1.29
CTNND1-206ENST00000415361 IGHV1-3A0A0C4DH29 117 aa6.98□□□□□ -1.29
CTNND1-206ENST00000415361 HIGD1CA8MV81 97 aa6.98□□□□□ -1.29
CTNND1-206ENST00000415361 FHITP49789 147 aa6.98□□□□□ -1.29
CTNND1-206ENST00000415361 SPOCK3Q9BQ16 436 aa6.98□□□□□ -1.29
CTNND1-206ENST00000415361 FOXA3P55318 350 aaPredicted RBP6.98□□□□□ -1.29
CTNND1-206ENST00000415361 C3orf36Q3SXR2 165 aa6.98□□□□□ -1.29
CTNND1-206ENST00000415361 MORN3Q6PF18 240 aaPredicted RBP6.98□□□□□ -1.29
CTNND1-206ENST00000415361 SMPXQ9UHP9 88 aa6.98□□□□□ -1.29
CTNND1-206ENST00000415361 PKDREJQ9NTG1 2253 aa6.98□□□□□ -1.29
CTNND1-206ENST00000415361 HBDP02042 147 aa6.98□□□□□ -1.29
CTNND1-206ENST00000415361 CD28P10747 220 aa6.98□□□□□ -1.29
CTNND1-206ENST00000415361 TMEM200BQ69YZ2 307 aa6.98□□□□□ -1.29
CTNND1-206ENST00000415361 SLC25A48Q6ZT89 311 aaKnown RBP6.98□□□□□ -1.29
CTNND1-206ENST00000415361 FGFBP3Q8TAT2 258 aa6.98□□□□□ -1.29
CTNND1-206ENST00000415361 TRGV9Q99603 122 aa6.98□□□□□ -1.29
CTNND1-206ENST00000415361 LAIR2Q6ISS4 152 aa6.97□□□□□ -1.29
CTNND1-206ENST00000415361 CHCHD1Q96BP2 118 aaKnown RBP6.97□□□□□ -1.29
CTNND1-206ENST00000415361 SLC17A3O00476 420 aa6.97□□□□□ -1.29
CTNND1-206ENST00000415361 PRB3Q04118 309 aaPredicted RBP6.97□□□□□ -1.29
CTNND1-206ENST00000415361 MUC21Q5SSG8 566 aa6.97□□□□□ -1.29
CTNND1-206ENST00000415361 DPM2O94777 84 aa6.97□□□□□ -1.29
CTNND1-206ENST00000415361 AMBPP02760 352 aa6.97□□□□□ -1.29
CTNND1-206ENST00000415361 SEC11AP67812 179 aa6.97□□□□□ -1.29
CTNND1-206ENST00000415361 SP5Q6BEB4 398 aaPredicted RBP6.97□□□□□ -1.29
CTNND1-206ENST00000415361 LINC00477Q96M19 166 aa6.97□□□□□ -1.29
CTNND1-206ENST00000415361 CHCHD5Q9BSY4 110 aa6.97□□□□□ -1.29
CTNND1-206ENST00000415361 SEPSECSQ9HD40 501 aaKnown RBP6.97□□□□□ -1.29
CTNND1-206ENST00000415361 KIF26BQ2KJY2 2108 aa6.97□□□□□ -1.29
CTNND1-206ENST00000415361 A0A1B0GWJ7 208 aa6.97□□□□□ -1.29
CTNND1-206ENST00000415361 LTBP2Q14767 1821 aa6.97□□□□□ -1.29
CTNND1-206ENST00000415361 TRBV6-6A0A0A6YYG2 114 aa6.96□□□□□ -1.29
CTNND1-206ENST00000415361 IGKV1D-13A0A0B4J2D9 117 aa6.96□□□□□ -1.29
CTNND1-206ENST00000415361 IGKV1-13P0DP09 117 aa6.96□□□□□ -1.29
CTNND1-206ENST00000415361 EGR1P18146 543 aa6.96□□□□□ -1.29
CTNND1-206ENST00000415361 SRD5A1P18405 259 aa6.96□□□□□ -1.29
CTNND1-206ENST00000415361 RCHY1Q96PM5 261 aa6.96□□□□□ -1.29
CTNND1-206ENST00000415361 WDR83OSQ9Y284 106 aa6.96□□□□□ -1.29
CTNND1-206ENST00000415361 IGKV1-9A0A0C4DH69 117 aa6.96□□□□□ -1.29
CTNND1-206ENST00000415361 NDUFA3O95167 84 aa6.96□□□□□ -1.29
CTNND1-206ENST00000415361 PLNP26678 52 aa6.96□□□□□ -1.29
CTNND1-206ENST00000415361 RPL36AP83881 106 aaKnown RBP6.96□□□□□ -1.29
CTNND1-206ENST00000415361 ID3Q02535 119 aa6.96□□□□□ -1.29
CTNND1-206ENST00000415361 RPL36ALQ969Q0 106 aaKnown RBP6.96□□□□□ -1.29
CTNND1-206ENST00000415361 USF3Q68DE3 2245 aa6.96□□□□□ -1.3
CTNND1-206ENST00000415361 INSP01308 110 aa6.96□□□□□ -1.3
CTNND1-206ENST00000415361 GAS1P54826 345 aa6.96□□□□□ -1.3
CTNND1-206ENST00000415361 RPRMLQ8N4K4 120 aa6.96□□□□□ -1.3
CTNND1-206ENST00000415361 GLMPQ8WWB7 406 aa6.96□□□□□ -1.3
CTNND1-206ENST00000415361 NABP1Q96AH0 204 aa6.96□□□□□ -1.3
CTNND1-206ENST00000415361 HEATR1Q9H583 2144 aaKnown RBP6.96□□□□□ -1.3
CTNND1-206ENST00000415361 PRB1P04280 392 aa6.96□□□□□ -1.3
CTNND1-206ENST00000415361 C15orf32Q32M92 178 aa6.96□□□□□ -1.3
CTNND1-206ENST00000415361 LYPD1Q8N2G4 141 aa6.96□□□□□ -1.3
CTNND1-206ENST00000415361 OR2K2Q8NGT1 345 aa6.96□□□□□ -1.3
CTNND1-206ENST00000415361 CHTOPQ9Y3Y2 248 aaKnown RBP6.96□□□□□ -1.3
CTNND1-206ENST00000415361 WT1P19544 449 aaPredicted RBP6.96□□□□□ -1.3
CTNND1-206ENST00000415361 TSKUQ8WUA8 353 aa6.96□□□□□ -1.3
CTNND1-206ENST00000415361 CRIM1Q9NZV1 1036 aa6.96□□□□□ -1.3
CTNND1-206ENST00000415361 SNRNP200O75643 2136 aaKnown RBP6.96□□□□□ -1.3
CTNND1-206ENST00000415361 FER1L5A0AVI2 2057 aa6.95□□□□□ -1.3
CTNND1-206ENST00000415361 A0A087WX48 190 aa6.95□□□□□ -1.3
CTNND1-206ENST00000415361 GATA2P23769 480 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-206ENST00000415361 RPL23P62829 140 aaKnown RBP6.95□□□□□ -1.3
CTNND1-206ENST00000415361 RASL11AQ6T310 242 aa6.95□□□□□ -1.3
CTNND1-206ENST00000415361 GNB1LQ9BYB4 327 aa6.95□□□□□ -1.3
CTNND1-206ENST00000415361 DPH3P1Q9H4G8 78 aa6.95□□□□□ -1.3
CTNND1-206ENST00000415361 LOC102724200A0A096LPH7 203 aaPredicted RBP6.95□□□□□ -1.3
CTNND1-206ENST00000415361 J3QRE1 110 aa6.95□□□□□ -1.3
CTNND1-206ENST00000415361 RAMP3O60896 148 aa6.95□□□□□ -1.3
CTNND1-206ENST00000415361 GNG5P63218 68 aa6.95□□□□□ -1.3
CTNND1-206ENST00000415361 EFNB3Q15768 340 aa6.95□□□□□ -1.3
CTNND1-206ENST00000415361 C5orf64Q2M2E5 130 aa6.95□□□□□ -1.3
CTNND1-206ENST00000415361 LINC00469Q8N7U9 141 aa6.95□□□□□ -1.3
CTNND1-206ENST00000415361 SRCAPQ6ZRS2 3230 aa6.95□□□□□ -1.3
CTNND1-206ENST00000415361 IGHV3OR16-8A0A075B7F1 116 aa6.95□□□□□ -1.3
CTNND1-206ENST00000415361 CKS1BP61024 79 aa6.95□□□□□ -1.3
CTNND1-206ENST00000415361 FBLN7Q53RD9 439 aa6.95□□□□□ -1.3
CTNND1-206ENST00000415361 NRN1Q9NPD7 142 aa6.95□□□□□ -1.3
CTNND1-206ENST00000415361 MPDZO75970 2070 aa6.95□□□□□ -1.3
CTNND1-206ENST00000415361 FAM208BQ5VWN6 2430 aa6.95□□□□□ -1.3
CTNND1-206ENST00000415361 BUB1B-PAK6H3BSN5 160 aa6.95□□□□□ -1.3
CTNND1-206ENST00000415361 B3GALT5-AS1P59052 145 aa6.95□□□□□ -1.3
CTNND1-206ENST00000415361 MBD3L1Q8WWY6 194 aa6.95□□□□□ -1.3
CTNND1-206ENST00000415361 H3BUX3 64 aa6.95□□□□□ -1.3
CTNND1-206ENST00000415361 PRR32B1ATL7 298 aa6.94□□□□□ -1.3
CTNND1-206ENST00000415361 TFF1P04155 84 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms