RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 C7orf69Q9H7B7 122 aa7.89□□□□□ -1.15
CD44-206ENST00000415148 SAP30LQ9HAJ7 183 aa7.89□□□□□ -1.15
CD44-206ENST00000415148 PPIAL4EA0A075B759 164 aa7.88□□□□□ -1.15
CD44-206ENST00000415148 PPIAL4DF5H284 164 aa7.88□□□□□ -1.15
CD44-206ENST00000415148 TNFRSF13BO14836 293 aaPredicted RBP7.88□□□□□ -1.15
CD44-206ENST00000415148 PLAUP00749 431 aa7.88□□□□□ -1.15
CD44-206ENST00000415148 CRYGCP07315 174 aa7.88□□□□□ -1.15
CD44-206ENST00000415148 PPIAL4FP0DN26 164 aa7.88□□□□□ -1.15
CD44-206ENST00000415148 IGLL1P15814 213 aa7.88□□□□□ -1.15
CD44-206ENST00000415148 CA7P43166 264 aa7.88□□□□□ -1.15
CD44-206ENST00000415148 LGALS7P47929 136 aa7.88□□□□□ -1.15
CD44-206ENST00000415148 MFAP2P55001 183 aa7.88□□□□□ -1.15
CD44-206ENST00000415148 PRR27Q6MZM9 219 aa7.88□□□□□ -1.15
CD44-206ENST00000415148 RPRMLQ8N4K4 120 aa7.88□□□□□ -1.15
CD44-206ENST00000415148 DEFB124Q8NES8 71 aa7.88□□□□□ -1.15
CD44-206ENST00000415148 TRGV9Q99603 122 aa7.88□□□□□ -1.15
CD44-206ENST00000415148 MRPL36Q9P0J6 103 aaKnown RBP7.88□□□□□ -1.15
CD44-206ENST00000415148 SOX21Q9Y651 276 aaPredicted RBP7.88□□□□□ -1.15
CD44-206ENST00000415148 NDUFB3O43676 98 aa7.88□□□□□ -1.15
CD44-206ENST00000415148 PRB4P10163 310 aaPredicted RBP7.88□□□□□ -1.15
CD44-206ENST00000415148 CCL3L1P16619 93 aa7.88□□□□□ -1.15
CD44-206ENST00000415148 UBE2G1P62253 170 aa7.88□□□□□ -1.15
CD44-206ENST00000415148 CCL8P80075 99 aa7.88□□□□□ -1.15
CD44-206ENST00000415148 PAX2Q02962 417 aa7.88□□□□□ -1.15
CD44-206ENST00000415148 CT83Q5H943 113 aa7.88□□□□□ -1.15
CD44-206ENST00000415148 LINC00305Q7Z4B0 112 aa7.88□□□□□ -1.15
CD44-206ENST00000415148 FAM57AQ8TBR7 257 aa7.88□□□□□ -1.15
CD44-206ENST00000415148 TMEM190Q8WZ59 177 aa7.88□□□□□ -1.15
CD44-206ENST00000415148 ALKBH7Q9BT30 221 aaPredicted RBP7.88□□□□□ -1.15
CD44-206ENST00000415148 LOC105371242A0A075B767 164 aa7.87□□□□□ -1.15
CD44-206ENST00000415148 A0A1B0GXF2 115 aa7.87□□□□□ -1.15
CD44-206ENST00000415148 FAM181BA6NEQ2 426 aa7.87□□□□□ -1.15
CD44-206ENST00000415148 TMEM178BH3BS89 294 aa7.87□□□□□ -1.15
CD44-206ENST00000415148 CAMPP49913 170 aa7.87□□□□□ -1.15
CD44-206ENST00000415148 RBX1P62877 108 aa7.87□□□□□ -1.15
CD44-206ENST00000415148 LRRC10Q5BKY1 277 aa7.87□□□□□ -1.15
CD44-206ENST00000415148 C22orf34Q6ZV56 151 aa7.87□□□□□ -1.15
CD44-206ENST00000415148 TEX45Q8NA69 505 aa7.87□□□□□ -1.15
CD44-206ENST00000415148 OR4F17Q8NGA8 305 aa7.87□□□□□ -1.15
CD44-206ENST00000415148 GPR82Q96P67 336 aa7.87□□□□□ -1.15
CD44-206ENST00000415148 MCRIP2Q9BUT9 160 aaKnown RBP7.87□□□□□ -1.15
CD44-206ENST00000415148 MLST8Q9BVC4 326 aa7.87□□□□□ -1.15
CD44-206ENST00000415148 TNFRSF19Q9NS68 423 aa7.87□□□□□ -1.15
CD44-206ENST00000415148 CBY1Q9Y3M2 126 aa7.87□□□□□ -1.15
CD44-206ENST00000415148 ROS1P08922 2347 aa7.87□□□□□ -1.15
CD44-206ENST00000415148 TACC2O95359 2948 aa7.87□□□□□ -1.15
CD44-206ENST00000415148 SPAARA0A1B0GVQ0 90 aa7.86□□□□□ -1.15
CD44-206ENST00000415148 C2orf70A6NJV1 201 aa7.86□□□□□ -1.15
CD44-206ENST00000415148 HSBP1O75506 76 aa7.86□□□□□ -1.15
CD44-206ENST00000415148 PTTG1IPP53801 180 aa7.86□□□□□ -1.15
CD44-206ENST00000415148 PLP1P60201 277 aa7.86□□□□□ -1.15
CD44-206ENST00000415148 ADIPOQQ15848 244 aa7.86□□□□□ -1.15
CD44-206ENST00000415148 C10orf55Q5SWW7 151 aa7.86□□□□□ -1.15
CD44-206ENST00000415148 RNASEKQ6P5S7 137 aaKnown RBP7.86□□□□□ -1.15
CD44-206ENST00000415148 LINC00322Q6ZN03 302 aaPredicted RBP7.86□□□□□ -1.15
CD44-206ENST00000415148 FMC1Q96HJ9 113 aa7.86□□□□□ -1.15
CD44-206ENST00000415148 PRSS22Q9GZN4 317 aa7.86□□□□□ -1.15
CD44-206ENST00000415148 GFRA4Q9GZZ7 299 aa7.86□□□□□ -1.15
CD44-206ENST00000415148 ZNF492Q9P255 531 aa7.86□□□□□ -1.15
CD44-206ENST00000415148 MRPS16Q9Y3D3 137 aaKnown RBP7.86□□□□□ -1.15
CD44-206ENST00000415148 ZZEF1O43149 2961 aa7.86□□□□□ -1.15
CD44-206ENST00000415148 MGAQ8IWI9 3026 aa7.86□□□□□ -1.15
CD44-206ENST00000415148 PGPA6NDG6 321 aa7.86□□□□□ -1.15
CD44-206ENST00000415148 HIGD1CA8MV81 97 aa7.86□□□□□ -1.15
CD44-206ENST00000415148 A8MWL6 223 aa7.86□□□□□ -1.15
CD44-206ENST00000415148 VSTM5A8MXK1 200 aa7.86□□□□□ -1.15
CD44-206ENST00000415148 TOMM40O96008 361 aa7.86□□□□□ -1.15
CD44-206ENST00000415148 SLC25A5P05141 298 aaKnown RBP7.86□□□□□ -1.15
CD44-206ENST00000415148 FOXE3Q13461 319 aa7.86□□□□□ -1.15
CD44-206ENST00000415148 FAM120AOSQ5T036 256 aa7.86□□□□□ -1.15
CD44-206ENST00000415148 TMEM116Q8NCL8 245 aa7.86□□□□□ -1.15
CD44-206ENST00000415148 OR8B3Q8NGG8 313 aa7.86□□□□□ -1.15
CD44-206ENST00000415148 C22orf15Q8WYQ4 148 aa7.86□□□□□ -1.15
CD44-206ENST00000415148 OR8B2Q96RD0 313 aa7.86□□□□□ -1.15
CD44-206ENST00000415148 KAAG1Q9UBP8 84 aa7.86□□□□□ -1.15
CD44-206ENST00000415148 ABCA1O95477 2261 aa7.86□□□□□ -1.15
CD44-206ENST00000415148 ADGRG4Q8IZF6 3080 aa7.86□□□□□ -1.15
CD44-206ENST00000415148 RP1L1Q8IWN7 2480 aaPredicted RBP7.85□□□□□ -1.15
CD44-206ENST00000415148 A0A1W2PPI3 338 aa7.85□□□□□ -1.15
CD44-206ENST00000415148 FAM231BA6NCW3 169 aa7.85□□□□□ -1.15
CD44-206ENST00000415148 C16orf97H3BN30 126 aa7.85□□□□□ -1.15
CD44-206ENST00000415148 M0R2Z0 102 aa7.85□□□□□ -1.15
CD44-206ENST00000415148 FCN3O75636 299 aa7.85□□□□□ -1.15
CD44-206ENST00000415148 NBEAP1P0C6P0 100 aa7.85□□□□□ -1.15
CD44-206ENST00000415148 REG1BP48304 166 aa7.85□□□□□ -1.15
CD44-206ENST00000415148 DLX6P56179 175 aa7.85□□□□□ -1.15
CD44-206ENST00000415148 MRGPRG-AS1Q2M3A8 158 aa7.85□□□□□ -1.15
CD44-206ENST00000415148 TCF24Q7RTU0 167 aa7.85□□□□□ -1.15
CD44-206ENST00000415148 C5orf17Q8NAS9 161 aa7.85□□□□□ -1.15
CD44-206ENST00000415148 TNFRSF14Q92956 283 aa7.85□□□□□ -1.15
CD44-206ENST00000415148 TRAV9-2A0A087WT02 112 aa7.85□□□□□ -1.15
CD44-206ENST00000415148 IGHV2-26A0A0B4J1V2 119 aa7.85□□□□□ -1.15
CD44-206ENST00000415148 H3BTX0 84 aa7.85□□□□□ -1.15
CD44-206ENST00000415148 FOXA3P55318 350 aaPredicted RBP7.85□□□□□ -1.15
CD44-206ENST00000415148 DIAPH2-AS1Q14236 149 aa7.85□□□□□ -1.15
CD44-206ENST00000415148 C8orf46Q8TAG6 207 aa7.85□□□□□ -1.15
CD44-206ENST00000415148 H1FXQ92522 213 aaKnown RBP7.85□□□□□ -1.15
CD44-206ENST00000415148 RPP21Q9H633 154 aaKnown RBP7.85□□□□□ -1.15
CD44-206ENST00000415148 C1RLQ9NZP8 487 aa7.85□□□□□ -1.15
CD44-206ENST00000415148 COX11Q9Y6N1 276 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms