RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 SPG11Q96JI7 2443 aa12.18□□□□□ -0.46
LRCH3-202ENST00000414675 IGLC1P0CG04 106 aa12.17□□□□□ -0.46
LRCH3-202ENST00000414675 CENPWQ5EE01 88 aa12.17□□□□□ -0.46
LRCH3-202ENST00000414675 KLF17Q5JT82 389 aaPredicted RBP12.17□□□□□ -0.46
LRCH3-202ENST00000414675 Q8N6K4 173 aa12.17□□□□□ -0.46
LRCH3-202ENST00000414675 SGMS2Q8NHU3 365 aa12.17□□□□□ -0.46
LRCH3-202ENST00000414675 AJUBAQ96IF1 538 aa12.17□□□□□ -0.46
LRCH3-202ENST00000414675 SRSF8Q9BRL6 282 aaKnown RBP12.17□□□□□ -0.46
LRCH3-202ENST00000414675 VPS13CQ709C8 3753 aa12.17□□□□□ -0.46
LRCH3-202ENST00000414675 HELTA6NFD8 242 aa12.17□□□□□ -0.46
LRCH3-202ENST00000414675 K7EIM0 57 aa12.17□□□□□ -0.46
LRCH3-202ENST00000414675 HIST1H1BP16401 226 aaKnown RBP12.17□□□□□ -0.46
LRCH3-202ENST00000414675 NDPQ00604 133 aa12.17□□□□□ -0.46
LRCH3-202ENST00000414675 OR5I1Q13606 314 aa12.17□□□□□ -0.46
LRCH3-202ENST00000414675 ASPHD1Q5U4P2 390 aa12.17□□□□□ -0.46
LRCH3-202ENST00000414675 OR10G8Q8NGN5 311 aa12.17□□□□□ -0.46
LRCH3-202ENST00000414675 TRAPPC1Q9Y5R8 145 aa12.17□□□□□ -0.46
LRCH3-202ENST00000414675 TOX4O94842 621 aa12.16□□□□□ -0.46
LRCH3-202ENST00000414675 FOXL1Q12952 345 aa12.16□□□□□ -0.46
LRCH3-202ENST00000414675 MINOS1Q5TGZ0 78 aa12.16□□□□□ -0.46
LRCH3-202ENST00000414675 CCDC144NLQ6NUI1 221 aa12.16□□□□□ -0.46
LRCH3-202ENST00000414675 MINOS1-NBL1R4GNA1 71 aa12.16□□□□□ -0.46
LRCH3-202ENST00000414675 AMBPP02760 352 aa12.16□□□□□ -0.46
LRCH3-202ENST00000414675 PRB1P04280 392 aa12.16□□□□□ -0.46
LRCH3-202ENST00000414675 CX3CL1P78423 397 aa12.16□□□□□ -0.46
LRCH3-202ENST00000414675 TIGITQ495A1 244 aa12.16□□□□□ -0.46
LRCH3-202ENST00000414675 COA6Q5JTJ3 125 aaKnown RBP12.16□□□□□ -0.46
LRCH3-202ENST00000414675 C9orf152Q5JTZ5 239 aa12.16□□□□□ -0.46
LRCH3-202ENST00000414675 FAM209BQ5JX69 171 aa12.16□□□□□ -0.46
LRCH3-202ENST00000414675 LPAR2Q9HBW0 351 aa12.16□□□□□ -0.46
LRCH3-202ENST00000414675 MYO18BQ8IUG5 2567 aa12.15□□□□□ -0.46
LRCH3-202ENST00000414675 NCBP2LA6PVI3 153 aaKnown RBP12.15□□□□□ -0.46
LRCH3-202ENST00000414675 PSG1P11464 419 aa12.15□□□□□ -0.46
LRCH3-202ENST00000414675 CNN1P51911 297 aaKnown RBP12.15□□□□□ -0.46
LRCH3-202ENST00000414675 EBI3Q14213 229 aa12.15□□□□□ -0.46
LRCH3-202ENST00000414675 DNLZQ5SXM8 178 aa12.15□□□□□ -0.46
LRCH3-202ENST00000414675 FAM120AOSQ5T036 256 aa12.15□□□□□ -0.46
LRCH3-202ENST00000414675 LEMD1Q68G75 181 aa12.15□□□□□ -0.46
LRCH3-202ENST00000414675 PERPQ96FX8 193 aa12.15□□□□□ -0.46
LRCH3-202ENST00000414675 LY96Q9Y6Y9 160 aa12.15□□□□□ -0.46
LRCH3-202ENST00000414675 OOSP1A8MZH6 123 aa12.14□□□□□ -0.47
LRCH3-202ENST00000414675 SLC17A3O00476 420 aa12.14□□□□□ -0.47
LRCH3-202ENST00000414675 HYPMO75409 117 aa12.14□□□□□ -0.47
LRCH3-202ENST00000414675 IGKV1-17P01599 117 aa12.14□□□□□ -0.47
LRCH3-202ENST00000414675 GNG4P50150 75 aa12.14□□□□□ -0.47
LRCH3-202ENST00000414675 ZNF329Q86UD4 541 aa12.14□□□□□ -0.47
LRCH3-202ENST00000414675 LINC00479Q96M42 142 aa12.14□□□□□ -0.47
LRCH3-202ENST00000414675 EPG5Q9HCE0 2579 aa12.14□□□□□ -0.47
LRCH3-202ENST00000414675 IGLV2-8P01709 118 aa12.14□□□□□ -0.47
LRCH3-202ENST00000414675 PLP1P60201 277 aa12.14□□□□□ -0.47
LRCH3-202ENST00000414675 IGF2BP2-AS1Q96M15 143 aa12.14□□□□□ -0.47
LRCH3-202ENST00000414675 PRDM13Q9H4Q3 707 aa12.14□□□□□ -0.47
LRCH3-202ENST00000414675 S4R3C0 116 aa12.14□□□□□ -0.47
LRCH3-202ENST00000414675 UTP20O75691 2785 aaKnown RBP12.14□□□□□ -0.47
LRCH3-202ENST00000414675 PDLIM4P50479 330 aa12.13□□□□□ -0.47
LRCH3-202ENST00000414675 UBE2E1P51965 193 aa12.13□□□□□ -0.47
LRCH3-202ENST00000414675 RPL15P61313 204 aaKnown RBP12.13□□□□□ -0.47
LRCH3-202ENST00000414675 ZNF562Q6V9R5 426 aa12.13□□□□□ -0.47
LRCH3-202ENST00000414675 ARPC1AQ92747 370 aa12.13□□□□□ -0.47
LRCH3-202ENST00000414675 TMEM11P17152 192 aa12.13□□□□□ -0.47
LRCH3-202ENST00000414675 LYZP61626 148 aa12.13□□□□□ -0.47
LRCH3-202ENST00000414675 BLNKQ8WV28 456 aa12.13□□□□□ -0.47
LRCH3-202ENST00000414675 FANCD2OSQ96PS1 177 aa12.13□□□□□ -0.47
LRCH3-202ENST00000414675 GP9P14770 177 aa12.12□□□□□ -0.47
LRCH3-202ENST00000414675 SAA4P35542 130 aa12.12□□□□□ -0.47
LRCH3-202ENST00000414675 MYCNOSP40205 109 aa12.12□□□□□ -0.47
LRCH3-202ENST00000414675 OR5R1Q8NH85 324 aa12.12□□□□□ -0.47
LRCH3-202ENST00000414675 TMEM18Q96B42 140 aa12.12□□□□□ -0.47
LRCH3-202ENST00000414675 RBM14Q96PK6 669 aaKnown RBP12.12□□□□□ -0.47
LRCH3-202ENST00000414675 TBL2Q9Y4P3 447 aaKnown RBP12.12□□□□□ -0.47
LRCH3-202ENST00000414675 H3BTX0 84 aa12.12□□□□□ -0.47
LRCH3-202ENST00000414675 RANP62826 216 aaKnown RBP12.12□□□□□ -0.47
LRCH3-202ENST00000414675 GNG5P63218 68 aa12.12□□□□□ -0.47
LRCH3-202ENST00000414675 DEFA6Q01524 100 aa12.12□□□□□ -0.47
LRCH3-202ENST00000414675 JOSD1Q15040 202 aaPredicted RBP12.12□□□□□ -0.47
LRCH3-202ENST00000414675 RASL11BQ9BPW5 248 aa12.12□□□□□ -0.47
LRCH3-202ENST00000414675 IL36BQ9NZH7 164 aa12.12□□□□□ -0.47
LRCH3-202ENST00000414675 V9GYV3 84 aa12.12□□□□□ -0.47
LRCH3-202ENST00000414675 TSTD3H0UI37 97 aa12.11□□□□□ -0.47
LRCH3-202ENST00000414675 EGR2P11161 476 aaPredicted RBP12.11□□□□□ -0.47
LRCH3-202ENST00000414675 PIP4P2Q8N4L2 257 aa12.11□□□□□ -0.47
LRCH3-202ENST00000414675 NHLRC2Q8NBF2 726 aa12.11□□□□□ -0.47
LRCH3-202ENST00000414675 RNASE7Q9H1E1 156 aaKnown RBP12.11□□□□□ -0.47
LRCH3-202ENST00000414675 HIGD1AQ9Y241 93 aa12.11□□□□□ -0.47
LRCH3-202ENST00000414675 IGLV11-55A0A075B6I3 123 aa12.11□□□□□ -0.47
LRCH3-202ENST00000414675 TRAV34A0A0B4J273 112 aa12.11□□□□□ -0.47
LRCH3-202ENST00000414675 PEX7O00628 323 aa12.11□□□□□ -0.47
LRCH3-202ENST00000414675 ERVFC1-1P60608 527 aa12.11□□□□□ -0.47
LRCH3-202ENST00000414675 PKIAP61925 76 aa12.11□□□□□ -0.47
LRCH3-202ENST00000414675 Q8N9W7 124 aa12.11□□□□□ -0.47
LRCH3-202ENST00000414675 CCL19Q99731 98 aa12.11□□□□□ -0.47
LRCH3-202ENST00000414675 IGHV7-81A0A0B4J1V7 117 aa12.1□□□□□ -0.47
LRCH3-202ENST00000414675 IGHV4-61A0A0C4DH41 118 aa12.1□□□□□ -0.47
LRCH3-202ENST00000414675 NPIPB5A8MRT5 1133 aa12.1□□□□□ -0.47
LRCH3-202ENST00000414675 GCGP01275 180 aa12.1□□□□□ -0.47
LRCH3-202ENST00000414675 NBEAP1P0C6P0 100 aa12.1□□□□□ -0.47
LRCH3-202ENST00000414675 RPEL1Q2QD12 228 aa12.1□□□□□ -0.47
LRCH3-202ENST00000414675 STXBP6Q8NFX7 210 aa12.1□□□□□ -0.47
LRCH3-202ENST00000414675 MAP1AP78559 2803 aaPredicted RBP12.1□□□□□ -0.47
LRCH3-202ENST00000414675 TRAV9-1A0A075B6T8 112 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms