RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 SERPINE2P07093 398 aa3.09□□□□□ -1.91
CLK1-203ENST00000409769 CRYGBP07316 175 aa3.09□□□□□ -1.91
CLK1-203ENST00000409769 GIPP09681 153 aaPredicted RBP3.09□□□□□ -1.91
CLK1-203ENST00000409769 SAA1P0DJI8 122 aaPredicted RBP3.09□□□□□ -1.91
CLK1-203ENST00000409769 NQO2P16083 231 aa3.09□□□□□ -1.91
CLK1-203ENST00000409769 PAX6P26367 422 aa3.09□□□□□ -1.91
CLK1-203ENST00000409769 G6PCP35575 357 aa3.09□□□□□ -1.91
CLK1-203ENST00000409769 ARHGDIBP52566 201 aa3.09□□□□□ -1.91
CLK1-203ENST00000409769 SSX2Q16385 188 aa3.09□□□□□ -1.91
CLK1-203ENST00000409769 AANATQ16613 207 aa3.09□□□□□ -1.91
CLK1-203ENST00000409769 RTL8BQ17RB0 113 aa3.09□□□□□ -1.91
CLK1-203ENST00000409769 ZNF429Q86V71 674 aa3.09□□□□□ -1.91
CLK1-203ENST00000409769 TCTE3Q8IZS6 198 aa3.09□□□□□ -1.91
CLK1-203ENST00000409769 NPBQ8NG41 125 aa3.09□□□□□ -1.91
CLK1-203ENST00000409769 OR4D5Q8NGN0 318 aa3.09□□□□□ -1.91
CLK1-203ENST00000409769 OR4C13Q8NGP0 309 aa3.09□□□□□ -1.91
CLK1-203ENST00000409769 NANPQ8TBE9 248 aa3.09□□□□□ -1.91
CLK1-203ENST00000409769 PIFOQ8TCI5 191 aa3.09□□□□□ -1.91
CLK1-203ENST00000409769 ASB13Q8WXK3 278 aa3.09□□□□□ -1.91
CLK1-203ENST00000409769 GPR146Q96CH1 333 aa3.09□□□□□ -1.91
CLK1-203ENST00000409769 FLYWCH2Q96CP2 140 aaKnown RBP3.09□□□□□ -1.91
CLK1-203ENST00000409769 C2orf50Q96LR7 162 aa3.09□□□□□ -1.91
CLK1-203ENST00000409769 NMES1Q9C002 83 aa3.09□□□□□ -1.91
CLK1-203ENST00000409769 ZNF436Q9C0F3 470 aaPredicted RBP3.09□□□□□ -1.91
CLK1-203ENST00000409769 C11orf1Q9H5F2 150 aa3.09□□□□□ -1.91
CLK1-203ENST00000409769 PLSCR3Q9NRY6 295 aa3.09□□□□□ -1.91
CLK1-203ENST00000409769 BET1LQ9NYM9 111 aa3.09□□□□□ -1.91
CLK1-203ENST00000409769 NUP50Q9UKX7 468 aa3.09□□□□□ -1.91
CLK1-203ENST00000409769 SOX21Q9Y651 276 aaPredicted RBP3.09□□□□□ -1.91
CLK1-203ENST00000409769 FN1P02751 2386 aaKnown RBP3.09□□□□□ -1.92
CLK1-203ENST00000409769 MTORP42345 2549 aa3.09□□□□□ -1.92
CLK1-203ENST00000409769 MAP1AP78559 2803 aaPredicted RBP3.08□□□□□ -1.92
CLK1-203ENST00000409769 TRAV14DV4A0A0A6YYC5 116 aa3.08□□□□□ -1.92
CLK1-203ENST00000409769 TRAV3A0A0B4J244 114 aa3.08□□□□□ -1.92
CLK1-203ENST00000409769 MDFIC2A0A1B0GVS7 189 aa3.08□□□□□ -1.92
CLK1-203ENST00000409769 UPK2O00526 184 aa3.08□□□□□ -1.92
CLK1-203ENST00000409769 CCNKO75909 580 aa3.08□□□□□ -1.92
CLK1-203ENST00000409769 ATG12O94817 140 aa3.08□□□□□ -1.92
CLK1-203ENST00000409769 LY6G6DO95868 133 aa3.08□□□□□ -1.92
CLK1-203ENST00000409769 MOSP00540 346 aa3.08□□□□□ -1.92
CLK1-203ENST00000409769 HRASP01112 189 aa3.08□□□□□ -1.92
CLK1-203ENST00000409769 KRASP01116 189 aa3.08□□□□□ -1.92
CLK1-203ENST00000409769 IFNA21P01568 189 aa3.08□□□□□ -1.92
CLK1-203ENST00000409769 IGKV1D-33P01593 117 aa3.08□□□□□ -1.92
CLK1-203ENST00000409769 IGKV1-33P01594 117 aa3.08□□□□□ -1.92
CLK1-203ENST00000409769 FBP1P09467 338 aa3.08□□□□□ -1.92
CLK1-203ENST00000409769 GIG44P09565 113 aaPredicted RBP3.08□□□□□ -1.92
CLK1-203ENST00000409769 CNTFRP26992 372 aa3.08□□□□□ -1.92
CLK1-203ENST00000409769 LGALS7P47929 136 aa3.08□□□□□ -1.92
CLK1-203ENST00000409769 AKR1C2P52895 323 aa3.08□□□□□ -1.92
CLK1-203ENST00000409769 UBE2KP61086 200 aa3.08□□□□□ -1.92
CLK1-203ENST00000409769 SMCO1Q147U7 214 aa3.08□□□□□ -1.92
CLK1-203ENST00000409769 PSG5Q15238 335 aa3.08□□□□□ -1.92
CLK1-203ENST00000409769 LRRC75BQ2VPJ9 315 aa3.08□□□□□ -1.92
CLK1-203ENST00000409769 Q5BKY6 102 aa3.08□□□□□ -1.92
CLK1-203ENST00000409769 FAM120AOSQ5T036 256 aa3.08□□□□□ -1.92
CLK1-203ENST00000409769 MOB3BQ86TA1 216 aa3.08□□□□□ -1.92
CLK1-203ENST00000409769 AKAP14Q86UN6 197 aa3.08□□□□□ -1.92
CLK1-203ENST00000409769 VKORC1L1Q8N0U8 176 aa3.08□□□□□ -1.92
CLK1-203ENST00000409769 TEX29Q8N6K0 151 aa3.08□□□□□ -1.92
CLK1-203ENST00000409769 Q8N9W7 124 aa3.08□□□□□ -1.92
CLK1-203ENST00000409769 OR2T10Q8NGZ9 312 aa3.08□□□□□ -1.92
CLK1-203ENST00000409769 OR4A5Q8NH83 315 aa3.08□□□□□ -1.92
CLK1-203ENST00000409769 TMEM167AQ8TBQ9 72 aa3.08□□□□□ -1.92
CLK1-203ENST00000409769 SPIN2AQ99865 258 aa3.08□□□□□ -1.92
CLK1-203ENST00000409769 SMR3AQ99954 134 aa3.08□□□□□ -1.92
CLK1-203ENST00000409769 SPIN2BQ9BPZ2 258 aa3.08□□□□□ -1.92
CLK1-203ENST00000409769 RANBP3Q9H6Z4 567 aaPredicted RBP3.08□□□□□ -1.92
CLK1-203ENST00000409769 TMEM14BQ9NUH8 114 aa3.08□□□□□ -1.92
CLK1-203ENST00000409769 RCL1Q9Y2P8 373 aaKnown RBP3.08□□□□□ -1.92
CLK1-203ENST00000409769 OTOGQ6ZRI0 2925 aa3.08□□□□□ -1.92
CLK1-203ENST00000409769 CELSR1Q9NYQ6 3014 aa3.08□□□□□ -1.92
CLK1-203ENST00000409769 HIVEP1P15822 2718 aa3.07□□□□□ -1.92
CLK1-203ENST00000409769 CUBNO60494 3623 aa3.07□□□□□ -1.92
CLK1-203ENST00000409769 A0A1B0GW64 132 aa3.07□□□□□ -1.92
CLK1-203ENST00000409769 C5orf51A6NDU8 294 aa3.07□□□□□ -1.92
CLK1-203ENST00000409769 A6NDX4 124 aa3.07□□□□□ -1.92
CLK1-203ENST00000409769 FAM25EA8MYX2 175 aa3.07□□□□□ -1.92
CLK1-203ENST00000409769 E7EUB6 86 aa3.07□□□□□ -1.92
CLK1-203ENST00000409769 INS-IGF2F8WCM5 200 aa3.07□□□□□ -1.92
CLK1-203ENST00000409769 SMLR1H3BR10 107 aa3.07□□□□□ -1.92
CLK1-203ENST00000409769 H7C2Y5 167 aa3.07□□□□□ -1.92
CLK1-203ENST00000409769 K7EPK0 472 aa3.07□□□□□ -1.92
CLK1-203ENST00000409769 NBR2O15453 112 aa3.07□□□□□ -1.92
CLK1-203ENST00000409769 OR2F2O95006 317 aa3.07□□□□□ -1.92
CLK1-203ENST00000409769 MPC2O95563 127 aa3.07□□□□□ -1.92
CLK1-203ENST00000409769 C1QBP02746 253 aa3.07□□□□□ -1.92
CLK1-203ENST00000409769 CD99P14209 185 aa3.07□□□□□ -1.92
CLK1-203ENST00000409769 CD24P25063 80 aa3.07□□□□□ -1.92
CLK1-203ENST00000409769 BRS3P32247 399 aa3.07□□□□□ -1.92
CLK1-203ENST00000409769 MEOX2P50222 304 aa3.07□□□□□ -1.92
CLK1-203ENST00000409769 PRSS8Q16651 343 aa3.07□□□□□ -1.92
CLK1-203ENST00000409769 IAH1Q2TAA2 248 aaPredicted RBP3.07□□□□□ -1.92
CLK1-203ENST00000409769 DEFB112Q30KQ8 113 aa3.07□□□□□ -1.92
CLK1-203ENST00000409769 VMA21Q3ZAQ7 101 aa3.07□□□□□ -1.92
CLK1-203ENST00000409769 THOC7Q6I9Y2 204 aaKnown RBP3.07□□□□□ -1.92
CLK1-203ENST00000409769 SSX9Q7RTT3 188 aa3.07□□□□□ -1.92
CLK1-203ENST00000409769 H2BFWTQ7Z2G1 175 aa3.07□□□□□ -1.92
CLK1-203ENST00000409769 FAM71E2Q8N5Q1 922 aa3.07□□□□□ -1.92
CLK1-203ENST00000409769 OR8H1Q8NGG4 311 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms