RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 BBC3Q96PG8 261 aaPredicted RBP6.07□□□□□ -1.44
SH3D19-203ENST00000409598 TP53RKQ96S44 253 aa6.07□□□□□ -1.44
SH3D19-203ENST00000409598 NAT8BQ9UHF3 227 aa6.07□□□□□ -1.44
SH3D19-203ENST00000409598 CENPVL3A0A0U1RRI6 287 aa6.07□□□□□ -1.44
SH3D19-203ENST00000409598 CTXND1A0A1B0GTU2 59 aa6.07□□□□□ -1.44
SH3D19-203ENST00000409598 TMEM89A2RUT3 159 aa6.07□□□□□ -1.44
SH3D19-203ENST00000409598 ZNF688P0C7X2 276 aa6.07□□□□□ -1.44
SH3D19-203ENST00000409598 RNASE4P34096 147 aaKnown RBP6.07□□□□□ -1.44
SH3D19-203ENST00000409598 FAM3BP58499 235 aaPredicted RBP6.07□□□□□ -1.44
SH3D19-203ENST00000409598 HERVK_113P61574 105 aa6.07□□□□□ -1.44
SH3D19-203ENST00000409598 ZNF818PQ6ZRF7 136 aa6.07□□□□□ -1.44
SH3D19-203ENST00000409598 TXNDC17Q9BRA2 123 aa6.07□□□□□ -1.44
SH3D19-203ENST00000409598 MIEN1Q9BRT3 115 aa6.07□□□□□ -1.44
SH3D19-203ENST00000409598 J3QR89 54 aa6.07□□□□□ -1.44
SH3D19-203ENST00000409598 SPINK4O60575 86 aa6.07□□□□□ -1.44
SH3D19-203ENST00000409598 DUTP33316 252 aaKnown RBP6.07□□□□□ -1.44
SH3D19-203ENST00000409598 DEFB131AP59861 70 aa6.07□□□□□ -1.44
SH3D19-203ENST00000409598 RNASEKQ6P5S7 137 aaKnown RBP6.07□□□□□ -1.44
SH3D19-203ENST00000409598 SELENOHQ8IZQ5 122 aaKnown RBP6.07□□□□□ -1.44
SH3D19-203ENST00000409598 IL36RNQ9UBH0 155 aa6.07□□□□□ -1.44
SH3D19-203ENST00000409598 IGHV3OR16-8A0A075B7F1 116 aa6.06□□□□□ -1.44
SH3D19-203ENST00000409598 C22orf46C9J442 243 aa6.06□□□□□ -1.44
SH3D19-203ENST00000409598 NUDT3O95989 172 aa6.06□□□□□ -1.44
SH3D19-203ENST00000409598 TFF1P04155 84 aa6.06□□□□□ -1.44
SH3D19-203ENST00000409598 FHITP49789 147 aa6.06□□□□□ -1.44
SH3D19-203ENST00000409598 FBLN7Q53RD9 439 aa6.06□□□□□ -1.44
SH3D19-203ENST00000409598 SPATA25Q9BR10 227 aa6.06□□□□□ -1.44
SH3D19-203ENST00000409598 ANAPC1Q9H1A4 1944 aa6.06□□□□□ -1.44
SH3D19-203ENST00000409598 TNFRSF13BO14836 293 aaPredicted RBP6.06□□□□□ -1.44
SH3D19-203ENST00000409598 CCL18P55774 89 aa6.06□□□□□ -1.44
SH3D19-203ENST00000409598 HILS1P60008 231 aa6.06□□□□□ -1.44
SH3D19-203ENST00000409598 LINC00305Q7Z4B0 112 aa6.06□□□□□ -1.44
SH3D19-203ENST00000409598 SMIM8Q96KF7 97 aa6.06□□□□□ -1.44
SH3D19-203ENST00000409598 TMSB15BA0A087X1C1 80 aa6.06□□□□□ -1.44
SH3D19-203ENST00000409598 TRAV21A0A0B4J279 112 aa6.06□□□□□ -1.44
SH3D19-203ENST00000409598 CGB3P0DN86 165 aa6.06□□□□□ -1.44
SH3D19-203ENST00000409598 SERF2P84101 59 aa6.06□□□□□ -1.44
SH3D19-203ENST00000409598 OR10J3Q5JRS4 329 aa6.06□□□□□ -1.44
SH3D19-203ENST00000409598 MORN3Q6PF18 240 aaPredicted RBP6.06□□□□□ -1.44
SH3D19-203ENST00000409598 GPR132Q9UNW8 380 aa6.06□□□□□ -1.44
SH3D19-203ENST00000409598 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.06□□□□□ -1.445e-7■■■■□ 23.4
SH3D19-203ENST00000409598 ADAMTS9Q9P2N4 1935 aa6.06□□□□□ -1.44
SH3D19-203ENST00000409598 TMEM42Q69YG0 159 aa6.06□□□□□ -1.44
SH3D19-203ENST00000409598 TREML4Q6UXN2 200 aa6.06□□□□□ -1.44
SH3D19-203ENST00000409598 C8orf86Q6ZUL3 223 aa6.06□□□□□ -1.44
SH3D19-203ENST00000409598 TMEM183AQ8IXX5 376 aa6.06□□□□□ -1.44
SH3D19-203ENST00000409598 PARD6GQ9BYG4 376 aaPredicted RBP6.06□□□□□ -1.44
SH3D19-203ENST00000409598 ZNF256Q9Y2P7 627 aaPredicted RBP6.06□□□□□ -1.44
SH3D19-203ENST00000409598 PDE6DO43924 150 aa6.05□□□□□ -1.44
SH3D19-203ENST00000409598 MALP21145 153 aa6.05□□□□□ -1.44
SH3D19-203ENST00000409598 OTX1P32242 354 aaPredicted RBP6.05□□□□□ -1.44
SH3D19-203ENST00000409598 OR2D3Q8NGH3 330 aa6.05□□□□□ -1.44
SH3D19-203ENST00000409598 PRSS3P2Q8NHM4 247 aa6.05□□□□□ -1.44
SH3D19-203ENST00000409598 FER1L5A0AVI2 2057 aa6.05□□□□□ -1.44
SH3D19-203ENST00000409598 RNASE1P07998 156 aaKnown RBP6.05□□□□□ -1.44
SH3D19-203ENST00000409598 SNRPCP09234 159 aaKnown RBP6.05□□□□□ -1.44
SH3D19-203ENST00000409598 Q6ZR03 302 aa6.05□□□□□ -1.44
SH3D19-203ENST00000409598 NDUFAF3Q9BU61 184 aa6.05□□□□□ -1.44
SH3D19-203ENST00000409598 ZNRD1Q9P1U0 126 aa6.05□□□□□ -1.44
SH3D19-203ENST00000409598 HELZP42694 1942 aaKnown RBP6.05□□□□□ -1.44
SH3D19-203ENST00000409598 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.05□□□□□ -1.44
SH3D19-203ENST00000409598 IGKV3OR2-268A0A0C4DH90 116 aa6.05□□□□□ -1.44
SH3D19-203ENST00000409598 A0A1B0GWJ7 208 aa6.05□□□□□ -1.44
SH3D19-203ENST00000409598 IGHV3-48P01763 117 aa6.05□□□□□ -1.44
SH3D19-203ENST00000409598 CD7P09564 240 aa6.05□□□□□ -1.44
SH3D19-203ENST00000409598 HINT1P49773 126 aaPredicted RBP6.05□□□□□ -1.44
SH3D19-203ENST00000409598 COX19Q49B96 90 aa6.05□□□□□ -1.44
SH3D19-203ENST00000409598 KIR2DL4Q99706 377 aa6.05□□□□□ -1.44
SH3D19-203ENST00000409598 FANCMQ8IYD8 2048 aa6.05□□□□□ -1.44
SH3D19-203ENST00000409598 DIRC3C9JPN6 131 aa6.05□□□□□ -1.44
SH3D19-203ENST00000409598 DEFB130BP0DP73 79 aa6.05□□□□□ -1.44
SH3D19-203ENST00000409598 DEFB130AP0DP74 79 aa6.05□□□□□ -1.44
SH3D19-203ENST00000409598 BCL2P10415 239 aa6.05□□□□□ -1.44
SH3D19-203ENST00000409598 RPS11P62280 158 aaKnown RBP eCLIP6.05□□□□□ -1.44
SH3D19-203ENST00000409598 OR11H6Q8NGC7 330 aa6.05□□□□□ -1.44
SH3D19-203ENST00000409598 PIFOQ8TCI5 191 aa6.05□□□□□ -1.44
SH3D19-203ENST00000409598 RNF183Q96D59 192 aa6.05□□□□□ -1.44
SH3D19-203ENST00000409598 UBE2E2Q96LR5 201 aa6.05□□□□□ -1.44
SH3D19-203ENST00000409598 HEATR1Q9H583 2144 aaKnown RBP6.05□□□□□ -1.44
SH3D19-203ENST00000409598 SRD5A3Q9H8P0 318 aa6.05□□□□□ -1.44
SH3D19-203ENST00000409598 TMEM160Q9NX00 188 aa6.05□□□□□ -1.44
SH3D19-203ENST00000409598 J3QRE1 110 aa6.05□□□□□ -1.44
SH3D19-203ENST00000409598 NDUFA4O00483 81 aa6.05□□□□□ -1.44
SH3D19-203ENST00000409598 PITX3O75364 302 aa6.05□□□□□ -1.44
SH3D19-203ENST00000409598 RUNX1Q01196 453 aa6.05□□□□□ -1.44
SH3D19-203ENST00000409598 TWIST1Q15672 202 aa6.05□□□□□ -1.44
SH3D19-203ENST00000409598 LY6G6FQ5SQ64 297 aa6.05□□□□□ -1.44
SH3D19-203ENST00000409598 TMEM144Q7Z5S9 345 aa6.05□□□□□ -1.44
SH3D19-203ENST00000409598 PSMG3-AS1Q96PY0 264 aa6.05□□□□□ -1.44
SH3D19-203ENST00000409598 HSPB9Q9BQS6 159 aa6.05□□□□□ -1.44
SH3D19-203ENST00000409598 MYLKQ15746 1914 aa6.04□□□□□ -1.44
SH3D19-203ENST00000409598 ICAM4Q14773 271 aa6.04□□□□□ -1.44
SH3D19-203ENST00000409598 C5orf66Q9H5L9 145 aa6.04□□□□□ -1.44
SH3D19-203ENST00000409598 TRGV1A0A0A0MS02 117 aa6.04□□□□□ -1.44
SH3D19-203ENST00000409598 K7ERU9 68 aa6.04□□□□□ -1.44
SH3D19-203ENST00000409598 TCF23Q7RTU1 214 aa6.04□□□□□ -1.44
SH3D19-203ENST00000409598 OR2K2Q8NGT1 345 aa6.04□□□□□ -1.44
SH3D19-203ENST00000409598 ASCL2Q99929 193 aa6.04□□□□□ -1.44
SH3D19-203ENST00000409598 SPAG8Q99932 426 aaPredicted RBP6.04□□□□□ -1.44
SH3D19-203ENST00000409598 FBLN5Q9UBX5 448 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms