RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 TCF24Q7RTU0 167 aa14.32□□□□□ -0.12
RTN4-207ENST00000402434 IGHV3-66A0A0C4DH42 116 aa14.31□□□□□ -0.12
RTN4-207ENST00000402434 HNRNPCP07910 306 aaKnown RBP eCLIP14.31□□□□□ -0.12
RTN4-207ENST00000402434 NARS2Q96I59 477 aaKnown RBP14.31□□□□□ -0.12
RTN4-207ENST00000402434 SRD5A3Q9H8P0 318 aa14.31□□□□□ -0.12
RTN4-207ENST00000402434 DNAH9Q9NYC9 4486 aa14.31□□□□□ -0.12
RTN4-207ENST00000402434 STAB2Q8WWQ8 2551 aa14.31□□□□□ -0.12
RTN4-207ENST00000402434 RBMY1BA6NDE4 496 aaKnown RBP14.31□□□□□ -0.12
RTN4-207ENST00000402434 RBMY1EA6NEQ0 496 aaKnown RBP14.31□□□□□ -0.12
RTN4-207ENST00000402434 K7EPK0 472 aa14.31□□□□□ -0.12
RTN4-207ENST00000402434 FABP1P07148 127 aa14.31□□□□□ -0.12
RTN4-207ENST00000402434 RBMY1DP0C7P1 496 aaKnown RBP14.31□□□□□ -0.12
RTN4-207ENST00000402434 P2RY1P47900 373 aa14.31□□□□□ -0.12
RTN4-207ENST00000402434 HAGHQ16775 308 aa14.31□□□□□ -0.12
RTN4-207ENST00000402434 ACOT7LQ6ZUV0 252 aa14.31□□□□□ -0.12
RTN4-207ENST00000402434 RNF125Q96EQ8 232 aa14.31□□□□□ -0.12
RTN4-207ENST00000402434 TM2D3Q9BRN9 247 aa14.31□□□□□ -0.12
RTN4-207ENST00000402434 C11orf1Q9H5F2 150 aa14.31□□□□□ -0.12
RTN4-207ENST00000402434 METTL15P1P0C7V9 234 aa14.3□□□□□ -0.12
RTN4-207ENST00000402434 PAFAH1B2P68402 229 aa14.3□□□□□ -0.12
RTN4-207ENST00000402434 ODF3L2Q3SX64 289 aa14.3□□□□□ -0.12
RTN4-207ENST00000402434 OR8G2PQ6IF36 304 aa14.3□□□□□ -0.12
RTN4-207ENST00000402434 TMEM144Q7Z5S9 345 aa14.3□□□□□ -0.12
RTN4-207ENST00000402434 U3KQK5 164 aa14.3□□□□□ -0.12
RTN4-207ENST00000402434 TRAV2A0A0B4J234 112 aa14.29□□□□□ -0.12
RTN4-207ENST00000402434 FNDC10F2Z333 226 aa14.29□□□□□ -0.12
RTN4-207ENST00000402434 BUB3O43684 328 aa14.29□□□□□ -0.12
RTN4-207ENST00000402434 CCNKO75909 580 aa14.29□□□□□ -0.12
RTN4-207ENST00000402434 DLK1P80370 383 aa14.29□□□□□ -0.12
RTN4-207ENST00000402434 OR10P1Q8NGE3 313 aa14.29□□□□□ -0.12
RTN4-207ENST00000402434 GRAMD2BQ96HH9 432 aa14.29□□□□□ -0.12
RTN4-207ENST00000402434 CITED4Q96RK1 184 aa14.29□□□□□ -0.12
RTN4-207ENST00000402434 MS4A6AQ9H2W1 248 aa14.29□□□□□ -0.12
RTN4-207ENST00000402434 RABAC1Q9UI14 185 aa14.29□□□□□ -0.12
RTN4-207ENST00000402434 LSM5Q9Y4Y9 91 aaKnown RBP14.29□□□□□ -0.12
RTN4-207ENST00000402434 IGKV3-7A0A075B6H7 116 aa14.28□□□□□ -0.12
RTN4-207ENST00000402434 C16orf54Q6UWD8 224 aa14.28□□□□□ -0.12
RTN4-207ENST00000402434 GBGT1Q8N5D6 347 aa14.28□□□□□ -0.12
RTN4-207ENST00000402434 GLMPQ8WWB7 406 aa14.28□□□□□ -0.12
RTN4-207ENST00000402434 TENM3Q9P273 2699 aa14.28□□□□□ -0.12
RTN4-207ENST00000402434 L7N2F9 121 aa14.27□□□□□ -0.12
RTN4-207ENST00000402434 CFDP00746 253 aaPredicted RBP14.27□□□□□ -0.12
RTN4-207ENST00000402434 TFPI2P48307 235 aa14.27□□□□□ -0.12
RTN4-207ENST00000402434 EIF2B2P49770 351 aaKnown RBP14.27□□□□□ -0.12
RTN4-207ENST00000402434 CMC4P56277 68 aaPredicted RBP14.27□□□□□ -0.12
RTN4-207ENST00000402434 RPL11P62913 178 aaKnown RBP14.27□□□□□ -0.12
RTN4-207ENST00000402434 VAMP2P63027 116 aa14.27□□□□□ -0.12
RTN4-207ENST00000402434 AKR1C1Q04828 323 aa14.27□□□□□ -0.12
RTN4-207ENST00000402434 RAB32Q13637 225 aa14.27□□□□□ -0.12
RTN4-207ENST00000402434 GGACTQ9BVM4 153 aa14.27□□□□□ -0.12
RTN4-207ENST00000402434 ZMAT4Q9H898 229 aa14.27□□□□□ -0.12
RTN4-207ENST00000402434 UBQLN2Q9UHD9 624 aa14.27□□□□□ -0.12
RTN4-207ENST00000402434 NBEAL2Q6ZNJ1 2754 aa14.27□□□□□ -0.13
RTN4-207ENST00000402434 ARL16Q0P5N6 197 aa14.26□□□□□ -0.13
RTN4-207ENST00000402434 OR2F1Q13607 317 aa14.26□□□□□ -0.13
RTN4-207ENST00000402434 PBDC1Q9BVG4 233 aa14.26□□□□□ -0.13
RTN4-207ENST00000402434 NPVFQ9HCQ7 196 aa14.26□□□□□ -0.13
RTN4-207ENST00000402434 HELTA6NFD8 242 aa14.25□□□□□ -0.13
RTN4-207ENST00000402434 DNASE2O00115 360 aaPredicted RBP14.25□□□□□ -0.13
RTN4-207ENST00000402434 GOSR2O14653 212 aa14.25□□□□□ -0.13
RTN4-207ENST00000402434 DEDDO75618 318 aa14.25□□□□□ -0.13
RTN4-207ENST00000402434 SIX6O95475 246 aa14.25□□□□□ -0.13
RTN4-207ENST00000402434 PTTG1O95997 202 aa14.25□□□□□ -0.13
RTN4-207ENST00000402434 PVALBP20472 110 aaPredicted RBP14.25□□□□□ -0.13
RTN4-207ENST00000402434 AP2S1P53680 142 aaPredicted RBP14.25□□□□□ -0.13
RTN4-207ENST00000402434 RCHY1Q96PM5 261 aa14.25□□□□□ -0.13
RTN4-207ENST00000402434 NMES1Q9C002 83 aa14.25□□□□□ -0.13
RTN4-207ENST00000402434 PFDN2Q9UHV9 154 aa14.25□□□□□ -0.13
RTN4-207ENST00000402434 SMCO3A2RU48 225 aa14.25□□□□□ -0.13
RTN4-207ENST00000402434 NUP62P37198 522 aaPredicted RBP14.25□□□□□ -0.13
RTN4-207ENST00000402434 CAV2P51636 162 aa14.25□□□□□ -0.13
RTN4-207ENST00000402434 S100A10P60903 97 aa14.25□□□□□ -0.13
RTN4-207ENST00000402434 LYZP61626 148 aa14.25□□□□□ -0.13
RTN4-207ENST00000402434 RRAS2P62070 204 aaPredicted RBP14.25□□□□□ -0.13
RTN4-207ENST00000402434 CYCSP99999 105 aaKnown RBP14.25□□□□□ -0.13
RTN4-207ENST00000402434 TMEM182Q6ZP80 229 aaPredicted RBP14.25□□□□□ -0.13
RTN4-207ENST00000402434 STPG3Q8N7X2 389 aa14.25□□□□□ -0.13
RTN4-207ENST00000402434 DCANP1Q8TF63 244 aa14.25□□□□□ -0.13
RTN4-207ENST00000402434 LYRM2Q9NU23 88 aaPredicted RBP14.25□□□□□ -0.13
RTN4-207ENST00000402434 K7EQG2 157 aa14.24□□□□□ -0.13
RTN4-207ENST00000402434 H2BFSP57053 126 aa14.24□□□□□ -0.13
RTN4-207ENST00000402434 C1orf194Q5T5A4 169 aa14.24□□□□□ -0.13
RTN4-207ENST00000402434 WFDC3Q8IUB2 231 aa14.24□□□□□ -0.13
RTN4-207ENST00000402434 SPATA25Q9BR10 227 aa14.24□□□□□ -0.13
RTN4-207ENST00000402434 GGTLC1Q9BX51 225 aa14.24□□□□□ -0.13
RTN4-207ENST00000402434 MAP6D1Q9H9H5 199 aa14.24□□□□□ -0.13
RTN4-207ENST00000402434 MGAT4CQ9UBM8 478 aa14.24□□□□□ -0.13
RTN4-207ENST00000402434 LOC102724200A0A096LPH7 203 aaPredicted RBP14.23□□□□□ -0.13
RTN4-207ENST00000402434 FAM24AA6NFZ4 105 aa14.23□□□□□ -0.13
RTN4-207ENST00000402434 GATA2P23769 480 aaPredicted RBP14.23□□□□□ -0.13
RTN4-207ENST00000402434 BCAP31P51572 246 aa14.23□□□□□ -0.13
RTN4-207ENST00000402434 SELENOTP62341 195 aa14.23□□□□□ -0.13
RTN4-207ENST00000402434 CYP2G1PQ6ZSU1 146 aa14.23□□□□□ -0.13
RTN4-207ENST00000402434 BPIFCQ8NFQ6 507 aa14.23□□□□□ -0.13
RTN4-207ENST00000402434 STXBP6Q8NFX7 210 aa14.23□□□□□ -0.13
RTN4-207ENST00000402434 SLC45A2Q9UMX9 530 aa14.23□□□□□ -0.13
RTN4-207ENST00000402434 SSNA1O43805 119 aa14.22□□□□□ -0.13
RTN4-207ENST00000402434 TEPPQ6URK8 271 aa14.22□□□□□ -0.13
RTN4-207ENST00000402434 SIGLEC15Q6ZMC9 328 aa14.22□□□□□ -0.13
RTN4-207ENST00000402434 APRG1Q8IVJ8 170 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms