RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 IFITM2Q01629 132 aa11.36□□□□□ -0.59
VAPA-202ENST00000400000 JPT2Q9H910 190 aa11.36□□□□□ -0.59
VAPA-202ENST00000400000 ERCC8Q13216 396 aa11.36□□□□□ -0.59
VAPA-202ENST00000400000 ZNF876PQ49A33 203 aa11.36□□□□□ -0.59
VAPA-202ENST00000400000 CD200R1LQ6Q8B3 271 aa11.36□□□□□ -0.59
VAPA-202ENST00000400000 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.36□□□□□ -0.59
VAPA-202ENST00000400000 BPESC1Q9GZL8 116 aa11.36□□□□□ -0.59
VAPA-202ENST00000400000 PEF1Q9UBV8 284 aaKnown RBP11.36□□□□□ -0.59
VAPA-202ENST00000400000 SMKR1H3BMG3 65 aa11.35□□□□□ -0.59
VAPA-202ENST00000400000 HIST1H4AP62805 103 aaKnown RBP11.35□□□□□ -0.59
VAPA-202ENST00000400000 TMEM155Q4W5P6 130 aa11.35□□□□□ -0.59
VAPA-202ENST00000400000 KNCNA6PVL3 124 aa11.35□□□□□ -0.59
VAPA-202ENST00000400000 SRRM4A7MD48 611 aaKnown RBP11.35□□□□□ -0.59
VAPA-202ENST00000400000 RPL23P62829 140 aaKnown RBP11.35□□□□□ -0.59
VAPA-202ENST00000400000 FAM90A1Q86YD7 464 aa11.35□□□□□ -0.59
VAPA-202ENST00000400000 SSC4DQ8WTU2 575 aa11.35□□□□□ -0.59
VAPA-202ENST00000400000 C18orf12Q96KH6 178 aa11.35□□□□□ -0.59
VAPA-202ENST00000400000 DOCK7Q96N67 2140 aa11.35□□□□□ -0.59
VAPA-202ENST00000400000 HEATR1Q9H583 2144 aaKnown RBP11.35□□□□□ -0.59
VAPA-202ENST00000400000 ZNF48Q96MX3 618 aaPredicted RBP11.35□□□□□ -0.59
VAPA-202ENST00000400000 IGKV1-9A0A0C4DH69 117 aa11.35□□□□□ -0.59
VAPA-202ENST00000400000 A0A1B0GTI1 187 aa11.35□□□□□ -0.59
VAPA-202ENST00000400000 SRSF1Q07955 248 aaKnown RBP eCLIP11.35□□□□□ -0.59
VAPA-202ENST00000400000 DERL1Q9BUN8 251 aa11.35□□□□□ -0.59
VAPA-202ENST00000400000 DOCK4Q8N1I0 1966 aa11.35□□□□□ -0.59
VAPA-202ENST00000400000 TRAV13-1A0A0B4J241 112 aa11.35□□□□□ -0.59
VAPA-202ENST00000400000 CGB3P0DN86 165 aa11.35□□□□□ -0.59
VAPA-202ENST00000400000 PSMG3Q9BT73 122 aaPredicted RBP11.35□□□□□ -0.59
VAPA-202ENST00000400000 NYNRINQ9P2P1 1898 aaKnown RBP11.34□□□□□ -0.59
VAPA-202ENST00000400000 TMEM30BQ3MIR4 351 aa11.34□□□□□ -0.59
VAPA-202ENST00000400000 CSRP1P21291 193 aaKnown RBP11.34□□□□□ -0.59
VAPA-202ENST00000400000 ATRAIDQ6UW56 229 aa11.34□□□□□ -0.59
VAPA-202ENST00000400000 DOCK10Q96BY6 2186 aa11.34□□□□□ -0.59
VAPA-202ENST00000400000 C5orf63A6NC05 138 aa11.34□□□□□ -0.59
VAPA-202ENST00000400000 LAMTOR3Q9UHA4 124 aa11.34□□□□□ -0.59
VAPA-202ENST00000400000 FAM186AA6NE01 2351 aa11.34□□□□□ -0.59
VAPA-202ENST00000400000 YPEL1O60688 119 aa11.34□□□□□ -0.59
VAPA-202ENST00000400000 YPEL2Q96QA6 119 aa11.34□□□□□ -0.59
VAPA-202ENST00000400000 WFDC1Q9HC57 220 aa11.34□□□□□ -0.59
VAPA-202ENST00000400000 DUSP14O95147 198 aaKnown RBP11.34□□□□□ -0.59
VAPA-202ENST00000400000 C1orf159Q96HA4 380 aa11.34□□□□□ -0.59
VAPA-202ENST00000400000 ZNF581Q9P0T4 197 aa11.34□□□□□ -0.59
VAPA-202ENST00000400000 COL6A6A6NMZ7 2263 aa11.34□□□□□ -0.59
VAPA-202ENST00000400000 NRXN2Q9P2S2 1712 aa11.33□□□□□ -0.59
VAPA-202ENST00000400000 UCP1P25874 307 aa11.33□□□□□ -0.6
VAPA-202ENST00000400000 KLHDC3Q9BQ90 382 aa11.33□□□□□ -0.6
VAPA-202ENST00000400000 COL4A6Q14031 1691 aa11.33□□□□□ -0.6
VAPA-202ENST00000400000 C19orf67A6NJJ6 358 aa11.33□□□□□ -0.6
VAPA-202ENST00000400000 SYNJ2BPP57105 145 aa11.33□□□□□ -0.6
VAPA-202ENST00000400000 EFNB3Q15768 340 aa11.33□□□□□ -0.6
VAPA-202ENST00000400000 OCC1Q8TAD7 63 aa11.33□□□□□ -0.6
VAPA-202ENST00000400000 NRN1Q9NPD7 142 aa11.33□□□□□ -0.6
VAPA-202ENST00000400000 CCL20P78556 96 aa11.33□□□□□ -0.6
VAPA-202ENST00000400000 NIT1Q86X76 327 aa11.33□□□□□ -0.6
VAPA-202ENST00000400000 MED12Q93074 2177 aa11.33□□□□□ -0.6
VAPA-202ENST00000400000 KIF26BQ2KJY2 2108 aa11.33□□□□□ -0.6
VAPA-202ENST00000400000 LRRC37AA6NMS7 1700 aa11.33□□□□□ -0.6
VAPA-202ENST00000400000 IGHV1-3A0A0C4DH29 117 aa11.33□□□□□ -0.6
VAPA-202ENST00000400000 DTX2Q86UW9 622 aa11.33□□□□□ -0.6
VAPA-202ENST00000400000 MBD3L1Q8WWY6 194 aa11.33□□□□□ -0.6
VAPA-202ENST00000400000 ARID2Q68CP9 1835 aa11.32□□□□□ -0.6
VAPA-202ENST00000400000 CYSLTR1Q9Y271 337 aa11.32□□□□□ -0.6
VAPA-202ENST00000400000 F8VVB4 439 aa11.32□□□□□ -0.6
VAPA-202ENST00000400000 F8VWA3 439 aa11.32□□□□□ -0.6
VAPA-202ENST00000400000 PSG1P11464 419 aa11.32□□□□□ -0.6
VAPA-202ENST00000400000 SLC25A2Q9BXI2 301 aa11.32□□□□□ -0.6
VAPA-202ENST00000400000 DMRT1Q9Y5R6 373 aa11.32□□□□□ -0.6
VAPA-202ENST00000400000 TRBV6-7A0A0A0MS04 114 aa11.32□□□□□ -0.6
VAPA-202ENST00000400000 HOXA3O43365 443 aaPredicted RBP11.32□□□□□ -0.6
VAPA-202ENST00000400000 CD177Q8N6Q3 437 aa11.32□□□□□ -0.6
VAPA-202ENST00000400000 TRGV11A0A075B6L2 103 aa11.32□□□□□ -0.6
VAPA-202ENST00000400000 HGFACQ04756 655 aa11.32□□□□□ -0.6
VAPA-202ENST00000400000 MLANAQ16655 118 aa11.32□□□□□ -0.6
VAPA-202ENST00000400000 MSRB2Q9Y3D2 182 aa11.32□□□□□ -0.6
VAPA-202ENST00000400000 A6NNC1 897 aa11.32□□□□□ -0.6
VAPA-202ENST00000400000 NAPSAO96009 420 aa11.32□□□□□ -0.6
VAPA-202ENST00000400000 OR2K2Q8NGT1 345 aa11.32□□□□□ -0.6
VAPA-202ENST00000400000 CACNA1EQ15878 2313 aa11.32□□□□□ -0.6
VAPA-202ENST00000400000 DOCK8Q8NF50 2099 aa11.31□□□□□ -0.6
VAPA-202ENST00000400000 DPM2O94777 84 aa11.31□□□□□ -0.6
VAPA-202ENST00000400000 PRB1P04280 392 aa11.31□□□□□ -0.6
VAPA-202ENST00000400000 DUTP33316 252 aaKnown RBP11.31□□□□□ -0.6
VAPA-202ENST00000400000 TMEM144Q7Z5S9 345 aa11.31□□□□□ -0.6
VAPA-202ENST00000400000 IGKCP01834 107 aa11.31□□□□□ -0.6
VAPA-202ENST00000400000 EFNA4P52798 201 aa11.31□□□□□ -0.6
VAPA-202ENST00000400000 ZFP36L1Q07352 338 aaKnown RBP11.31□□□□□ -0.6
VAPA-202ENST00000400000 IGHV1-8P0DP01 117 aa11.31□□□□□ -0.6
VAPA-202ENST00000400000 PRTN3P24158 256 aa11.31□□□□□ -0.6
VAPA-202ENST00000400000 RNF144BQ7Z419 303 aa11.31□□□□□ -0.6
VAPA-202ENST00000400000 KIAA2026Q5HYC2 2103 aa11.31□□□□□ -0.6
VAPA-202ENST00000400000 PVRIGQ6DKI7 326 aa11.31□□□□□ -0.6
VAPA-202ENST00000400000 BMPERQ8N8U9 685 aa11.31□□□□□ -0.6
VAPA-202ENST00000400000 FBLIM1Q8WUP2 373 aa11.31□□□□□ -0.6
VAPA-202ENST00000400000 SLC50A1Q9BRV3 221 aa11.31□□□□□ -0.6
VAPA-202ENST00000400000 CLDN16Q9Y5I7 305 aa11.31□□□□□ -0.6
VAPA-202ENST00000400000 SPTBN2O15020 2390 aa11.31□□□□□ -0.6
VAPA-202ENST00000400000 C14orf178Q8N769 122 aaPredicted RBP11.31□□□□□ -0.6
VAPA-202ENST00000400000 D6R8Y8 96 aa11.3□□□□□ -0.6
VAPA-202ENST00000400000 TPTE2P1Q5T6R2 138 aa11.3□□□□□ -0.6
VAPA-202ENST00000400000 TRAV8-1A0A0A6YYK1 113 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 433.7 ms