RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 IGHV2-70DA0A0C4DH43 119 aa14.06□□□□□ -0.16
HLA-DQB1-204ENST00000399084 RD3LP0DJH9 198 aa14.06□□□□□ -0.16
HLA-DQB1-204ENST00000399084 PSG1P11464 419 aa14.06□□□□□ -0.16
HLA-DQB1-204ENST00000399084 CX3CL1P78423 397 aa14.06□□□□□ -0.16
HLA-DQB1-204ENST00000399084 IBA57Q5T440 356 aaKnown RBP14.06□□□□□ -0.16
HLA-DQB1-204ENST00000399084 RASL11AQ6T310 242 aa14.06□□□□□ -0.16
HLA-DQB1-204ENST00000399084 TTC9CQ8N5M4 171 aa14.06□□□□□ -0.16
HLA-DQB1-204ENST00000399084 IGFBPL1Q8WX77 278 aa14.06□□□□□ -0.16
HLA-DQB1-204ENST00000399084 UBTD1Q9HAC8 227 aa14.06□□□□□ -0.16
HLA-DQB1-204ENST00000399084 LPAR2Q9HBW0 351 aa14.06□□□□□ -0.16
HLA-DQB1-204ENST00000399084 MRPL27Q9P0M9 148 aaKnown RBP14.06□□□□□ -0.16
HLA-DQB1-204ENST00000399084 K7EIM0 57 aa14.05□□□□□ -0.16
HLA-DQB1-204ENST00000399084 OVOL3O00110 214 aa14.05□□□□□ -0.16
HLA-DQB1-204ENST00000399084 FAM106CPP0CH98 169 aa14.05□□□□□ -0.16
HLA-DQB1-204ENST00000399084 GP9P14770 177 aa14.05□□□□□ -0.16
HLA-DQB1-204ENST00000399084 HES1Q14469 280 aa14.05□□□□□ -0.16
HLA-DQB1-204ENST00000399084 BAGE2Q86Y30 109 aa14.05□□□□□ -0.16
HLA-DQB1-204ENST00000399084 TMEM18Q96B42 140 aa14.05□□□□□ -0.16
HLA-DQB1-204ENST00000399084 PACRGQ96M98 296 aaPredicted RBP14.05□□□□□ -0.16
HLA-DQB1-204ENST00000399084 POLR3KQ9Y2Y1 108 aaPredicted RBP14.05□□□□□ -0.16
HLA-DQB1-204ENST00000399084 A0A1W2PPR1 153 aa14.04□□□□□ -0.16
HLA-DQB1-204ENST00000399084 SMIM27A0A1W2PRY6 76 aa14.04□□□□□ -0.16
HLA-DQB1-204ENST00000399084 HIST1H1EP10412 219 aaKnown RBP14.04□□□□□ -0.16
HLA-DQB1-204ENST00000399084 FABP4P15090 132 aa14.04□□□□□ -0.16
HLA-DQB1-204ENST00000399084 HIST1H1BP16401 226 aaKnown RBP14.04□□□□□ -0.16
HLA-DQB1-204ENST00000399084 HOXB4P17483 251 aaPredicted RBP14.04□□□□□ -0.16
HLA-DQB1-204ENST00000399084 HNF1AP20823 631 aa14.04□□□□□ -0.16
HLA-DQB1-204ENST00000399084 S100A7P31151 101 aa14.04□□□□□ -0.16
HLA-DQB1-204ENST00000399084 BRS3P32247 399 aa14.04□□□□□ -0.16
HLA-DQB1-204ENST00000399084 PRB3Q04118 309 aaPredicted RBP14.04□□□□□ -0.16
HLA-DQB1-204ENST00000399084 PYY3Q5JQD4 70 aa14.04□□□□□ -0.16
HLA-DQB1-204ENST00000399084 GFI1BQ5VTD9 330 aa14.04□□□□□ -0.16
HLA-DQB1-204ENST00000399084 LHFPL4Q7Z7J7 247 aa14.04□□□□□ -0.16
HLA-DQB1-204ENST00000399084 ATG101Q9BSB4 218 aa14.04□□□□□ -0.16
HLA-DQB1-204ENST00000399084 GSN-AS1Q9NRJ2 163 aa14.04□□□□□ -0.16
HLA-DQB1-204ENST00000399084 TOMM40O96008 361 aa14.04□□□□□ -0.16
HLA-DQB1-204ENST00000399084 CDKN1AP38936 164 aa14.04□□□□□ -0.16
HLA-DQB1-204ENST00000399084 LYPD1Q8N2G4 141 aa14.04□□□□□ -0.16
HLA-DQB1-204ENST00000399084 ARPC1AQ92747 370 aa14.04□□□□□ -0.16
HLA-DQB1-204ENST00000399084 FMC1Q96HJ9 113 aa14.04□□□□□ -0.16
HLA-DQB1-204ENST00000399084 OTORQ9NRC9 128 aa14.04□□□□□ -0.16
HLA-DQB1-204ENST00000399084 PGPA6NDG6 321 aa14.03□□□□□ -0.16
HLA-DQB1-204ENST00000399084 SLC17A3O00476 420 aa14.03□□□□□ -0.16
HLA-DQB1-204ENST00000399084 TOX4O94842 621 aa14.03□□□□□ -0.16
HLA-DQB1-204ENST00000399084 IGKV1-17P01599 117 aa14.03□□□□□ -0.16
HLA-DQB1-204ENST00000399084 SLC25A5P05141 298 aaKnown RBP14.03□□□□□ -0.16
HLA-DQB1-204ENST00000399084 ZFP36P26651 326 aaKnown RBP14.03□□□□□ -0.16
HLA-DQB1-204ENST00000399084 MFAP4P55083 255 aa14.03□□□□□ -0.16
HLA-DQB1-204ENST00000399084 UBE2G1P62253 170 aa14.03□□□□□ -0.16
HLA-DQB1-204ENST00000399084 RANP62826 216 aaKnown RBP14.03□□□□□ -0.16
HLA-DQB1-204ENST00000399084 KLRD1Q13241 179 aa14.03□□□□□ -0.16
HLA-DQB1-204ENST00000399084 OR5I1Q13606 314 aa14.03□□□□□ -0.16
HLA-DQB1-204ENST00000399084 GPR82Q96P67 336 aa14.03□□□□□ -0.16
HLA-DQB1-204ENST00000399084 SLC25A39Q9BZJ4 359 aaPredicted RBP14.03□□□□□ -0.16
HLA-DQB1-204ENST00000399084 NAV3Q8IVL0 2385 aa14.03□□□□□ -0.16
HLA-DQB1-204ENST00000399084 GNLYP22749 145 aa14.02□□□□□ -0.16
HLA-DQB1-204ENST00000399084 KLK9Q2XQG4 91 aa14.02□□□□□ -0.16
HLA-DQB1-204ENST00000399084 TXN2Q99757 166 aa14.02□□□□□ -0.16
HLA-DQB1-204ENST00000399084 KLK9Q9UKQ9 250 aa14.02□□□□□ -0.16
HLA-DQB1-204ENST00000399084 IGLV11-55A0A075B6I3 123 aa14.01□□□□□ -0.17
HLA-DQB1-204ENST00000399084 TRBV6-1A0A0K0K1D8 114 aa14.01□□□□□ -0.17
HLA-DQB1-204ENST00000399084 APELAP0DMC3 54 aa14.01□□□□□ -0.17
HLA-DQB1-204ENST00000399084 MGST1P10620 155 aaKnown RBP14.01□□□□□ -0.17
HLA-DQB1-204ENST00000399084 LMO4P61968 165 aa14.01□□□□□ -0.17
HLA-DQB1-204ENST00000399084 BPIFA4PQ86YQ2 179 aa14.01□□□□□ -0.17
HLA-DQB1-204ENST00000399084 OR5R1Q8NH85 324 aa14.01□□□□□ -0.17
HLA-DQB1-204ENST00000399084 SHANK2-AS3Q9BTD1 123 aa14.01□□□□□ -0.17
HLA-DQB1-204ENST00000399084 AMBPP02760 352 aa14.01□□□□□ -0.17
HLA-DQB1-204ENST00000399084 TMEM11P17152 192 aa14.01□□□□□ -0.17
HLA-DQB1-204ENST00000399084 FCGR2BP31994 310 aaPredicted RBP14.01□□□□□ -0.17
HLA-DQB1-204ENST00000399084 LYZP61626 148 aa14.01□□□□□ -0.17
HLA-DQB1-204ENST00000399084 JOSD1Q15040 202 aaPredicted RBP14.01□□□□□ -0.17
HLA-DQB1-204ENST00000399084 RUSC1-AS1Q66K80 236 aa14.01□□□□□ -0.17
HLA-DQB1-204ENST00000399084 ZNF600Q6ZNG1 722 aa14.01□□□□□ -0.17
HLA-DQB1-204ENST00000399084 GRAMD2BQ96HH9 432 aa14.01□□□□□ -0.17
HLA-DQB1-204ENST00000399084 PLXNB1O43157 2135 aa14□□□□□ -0.17
HLA-DQB1-204ENST00000399084 WI2-2373I1.2A0A1W2PRP0 233 aa14□□□□□ -0.17
HLA-DQB1-204ENST00000399084 IZUMO1RA6ND01 250 aa14□□□□□ -0.17
HLA-DQB1-204ENST00000399084 ZNF705GA8MUZ8 300 aaPredicted RBP14□□□□□ -0.17
HLA-DQB1-204ENST00000399084 HLA-DRB1P01911 266 aa14□□□□□ -0.17
HLA-DQB1-204ENST00000399084 PDZD11Q5EBL8 140 aa14□□□□□ -0.17
HLA-DQB1-204ENST00000399084 OR8I2Q8N0Y5 310 aa14□□□□□ -0.17
HLA-DQB1-204ENST00000399084 ARL6IP6Q8N6S5 226 aa14□□□□□ -0.17
HLA-DQB1-204ENST00000399084 WIPF2Q8TF74 440 aaPredicted RBP14□□□□□ -0.17
HLA-DQB1-204ENST00000399084 RNASE7Q9H1E1 156 aaKnown RBP14□□□□□ -0.17
HLA-DQB1-204ENST00000399084 NCBP2LA6PVI3 153 aaKnown RBP13.99□□□□□ -0.17
HLA-DQB1-204ENST00000399084 GATCO43716 136 aaKnown RBP13.99□□□□□ -0.17
HLA-DQB1-204ENST00000399084 HLA-DQA1P01909 254 aa13.99□□□□□ -0.17
HLA-DQB1-204ENST00000399084 ESDP10768 282 aa13.99□□□□□ -0.17
HLA-DQB1-204ENST00000399084 Q0VG73 95 aa13.99□□□□□ -0.17
HLA-DQB1-204ENST00000399084 CT83Q5H943 113 aa13.99□□□□□ -0.17
HLA-DQB1-204ENST00000399084 GBGT1Q8N5D6 347 aa13.99□□□□□ -0.17
HLA-DQB1-204ENST00000399084 MBD6Q96DN6 1003 aa13.99□□□□□ -0.17
HLA-DQB1-204ENST00000399084 MRPL18Q9H0U6 180 aaKnown RBP13.99□□□□□ -0.17
HLA-DQB1-204ENST00000399084 Q9H3A6 140 aa13.99□□□□□ -0.17
HLA-DQB1-204ENST00000399084 H3BRN7 92 aa13.98□□□□□ -0.17
HLA-DQB1-204ENST00000399084 GNG7O60262 68 aa13.98□□□□□ -0.17
HLA-DQB1-204ENST00000399084 TCRAP04437 139 aa13.98□□□□□ -0.17
HLA-DQB1-204ENST00000399084 PAFAH1B2P68402 229 aa13.98□□□□□ -0.17
HLA-DQB1-204ENST00000399084 C19orf35Q6ZS72 473 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms