RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 SARAFQ96BY9 339 aa19.39■□□□□ 0.69
CSNK1E-203ENST00000396832 SMIM12Q96EX1 92 aa19.39■□□□□ 0.69
CSNK1E-203ENST00000396832 MAP1LC3CQ9BXW4 147 aa19.39■□□□□ 0.69
CSNK1E-203ENST00000396832 HLA-DRB1P01911 266 aa19.38■□□□□ 0.69
CSNK1E-203ENST00000396832 GPR183P32249 361 aa19.38■□□□□ 0.69
CSNK1E-203ENST00000396832 ZZEF1O43149 2961 aa19.38■□□□□ 0.69
CSNK1E-203ENST00000396832 IGLC1P0CG04 106 aa19.38■□□□□ 0.69
CSNK1E-203ENST00000396832 CT45A6P0DMU7 189 aa19.38■□□□□ 0.69
CSNK1E-203ENST00000396832 CT45A5P0DMU8 189 aa19.38■□□□□ 0.69
CSNK1E-203ENST00000396832 CT45A7P0DMV0 189 aa19.38■□□□□ 0.69
CSNK1E-203ENST00000396832 RIPPLY3P57055 190 aa19.38■□□□□ 0.69
CSNK1E-203ENST00000396832 GUSBP1Q15486 140 aa19.38■□□□□ 0.69
CSNK1E-203ENST00000396832 PMCHL2Q9BQD1 86 aa19.38■□□□□ 0.69
CSNK1E-203ENST00000396832 ZFHX2Q9C0A1 2572 aaPredicted RBP19.38■□□□□ 0.69
CSNK1E-203ENST00000396832 H3BTX0 84 aa19.38■□□□□ 0.69
CSNK1E-203ENST00000396832 IGLV1-44P01699 117 aa19.38■□□□□ 0.69
CSNK1E-203ENST00000396832 C2orf83Q53S99 150 aa19.38■□□□□ 0.69
CSNK1E-203ENST00000396832 C7orf71A4D174 169 aa19.37■□□□□ 0.69
CSNK1E-203ENST00000396832 CDX4O14627 284 aaPredicted RBP19.37■□□□□ 0.69
CSNK1E-203ENST00000396832 ZNF138P52744 262 aa19.37■□□□□ 0.69
CSNK1E-203ENST00000396832 CR1LQ2VPA4 569 aa19.37■□□□□ 0.69
CSNK1E-203ENST00000396832 PROCRQ9UNN8 238 aa19.37■□□□□ 0.69
CSNK1E-203ENST00000396832 CD69Q07108 199 aa19.37■□□□□ 0.69
CSNK1E-203ENST00000396832 FOXE3Q13461 319 aa19.37■□□□□ 0.69
CSNK1E-203ENST00000396832 PET117Q6UWS5 81 aa19.37■□□□□ 0.69
CSNK1E-203ENST00000396832 ZCCHC24Q8N2G6 241 aaKnown RBP19.37■□□□□ 0.69
CSNK1E-203ENST00000396832 MS4A6AQ9H2W1 248 aa19.37■□□□□ 0.69
CSNK1E-203ENST00000396832 BLNKQ8WV28 456 aa19.36■□□□□ 0.69
CSNK1E-203ENST00000396832 PGLYRP4Q96LB8 373 aa19.36■□□□□ 0.69
CSNK1E-203ENST00000396832 ZNF71Q9NQZ8 489 aaPredicted RBP19.36■□□□□ 0.69
CSNK1E-203ENST00000396832 ZNF257Q9Y2Q1 563 aa19.36■□□□□ 0.69
CSNK1E-203ENST00000396832 ZNF318Q5VUA4 2279 aa19.36■□□□□ 0.69
CSNK1E-203ENST00000396832 GAGE10A6NGK3 116 aa19.36■□□□□ 0.69
CSNK1E-203ENST00000396832 UPK2O00526 184 aa19.36■□□□□ 0.69
CSNK1E-203ENST00000396832 COX7A2P2O60397 106 aa19.36■□□□□ 0.69
CSNK1E-203ENST00000396832 LIPFP07098 398 aa19.36■□□□□ 0.69
CSNK1E-203ENST00000396832 RNASE2P10153 161 aaKnown RBP19.36■□□□□ 0.69
CSNK1E-203ENST00000396832 ZNF137PP52743 207 aa19.36■□□□□ 0.69
CSNK1E-203ENST00000396832 SNAI2O43623 268 aa19.35■□□□□ 0.69
CSNK1E-203ENST00000396832 TIMM8BQ9Y5J9 83 aaPredicted RBP19.35■□□□□ 0.69
CSNK1E-203ENST00000396832 SP9P0CG40 484 aa19.35■□□□□ 0.69
CSNK1E-203ENST00000396832 CGB3P0DN86 165 aa19.35■□□□□ 0.69
CSNK1E-203ENST00000396832 CGB7P0DN87 165 aa19.35■□□□□ 0.69
CSNK1E-203ENST00000396832 LINC00322Q6ZN03 302 aaPredicted RBP19.35■□□□□ 0.69
CSNK1E-203ENST00000396832 GTSF1Q8WW33 167 aa19.35■□□□□ 0.69
CSNK1E-203ENST00000396832 HARBI1Q96MB7 349 aa19.35■□□□□ 0.69
CSNK1E-203ENST00000396832 IGHV3-21A0A0B4J1V1 117 aa19.34■□□□□ 0.69
CSNK1E-203ENST00000396832 OR5AL1P0C617 328 aa19.34■□□□□ 0.69
CSNK1E-203ENST00000396832 H1FXQ92522 213 aaKnown RBP19.34■□□□□ 0.69
CSNK1E-203ENST00000396832 MRPL20Q9BYC9 149 aaKnown RBP19.34■□□□□ 0.69
CSNK1E-203ENST00000396832 RPP21Q9H633 154 aaKnown RBP19.34■□□□□ 0.69
CSNK1E-203ENST00000396832 DIAPH2-AS1Q14236 149 aa19.34■□□□□ 0.69
CSNK1E-203ENST00000396832 POU2AF1Q16633 256 aa19.34■□□□□ 0.69
CSNK1E-203ENST00000396832 C10orf113Q5VZT2 155 aa19.34■□□□□ 0.69
CSNK1E-203ENST00000396832 NCOR1P1Q9H4R4 102 aa19.34■□□□□ 0.69
CSNK1E-203ENST00000396832 SLC25A15Q9Y619 301 aa19.33■□□□□ 0.69
CSNK1E-203ENST00000396832 PIEZO2Q9H5I5 2752 aa19.33■□□□□ 0.69
CSNK1E-203ENST00000396832 FAM231BA6NCW3 169 aa19.33■□□□□ 0.68
CSNK1E-203ENST00000396832 PPIAL4DF5H284 164 aa19.33■□□□□ 0.68
CSNK1E-203ENST00000396832 OR1L8Q8NGR8 309 aa19.33■□□□□ 0.68
CSNK1E-203ENST00000396832 FXYD5Q96DB9 178 aa19.33■□□□□ 0.68
CSNK1E-203ENST00000396832 ZNF714Q96N38 554 aa19.33■□□□□ 0.68
CSNK1E-203ENST00000396832 A8MWL6 223 aa19.32■□□□□ 0.68
CSNK1E-203ENST00000396832 PRR33A8MZF0 331 aa19.32■□□□□ 0.68
CSNK1E-203ENST00000396832 APOA2P02652 100 aa19.32■□□□□ 0.68
CSNK1E-203ENST00000396832 CCL3L1P16619 93 aa19.32■□□□□ 0.68
CSNK1E-203ENST00000396832 PATE2Q6UY27 113 aa19.32■□□□□ 0.68
CSNK1E-203ENST00000396832 C2orf91Q6ZV80 131 aa19.32■□□□□ 0.68
CSNK1E-203ENST00000396832 FNDC4Q9H6D8 234 aaPredicted RBP19.32■□□□□ 0.68
CSNK1E-203ENST00000396832 MRPL36Q9P0J6 103 aaKnown RBP19.32■□□□□ 0.68
CSNK1E-203ENST00000396832 DKK4Q9UBT3 224 aa19.32■□□□□ 0.68
CSNK1E-203ENST00000396832 EPDR1Q9UM22 224 aa19.32■□□□□ 0.68
CSNK1E-203ENST00000396832 SELENOKQ9Y6D0 94 aa19.32■□□□□ 0.68
CSNK1E-203ENST00000396832 MOSP00540 346 aa19.32■□□□□ 0.68
CSNK1E-203ENST00000396832 IGHG3P01860 377 aa19.32■□□□□ 0.68
CSNK1E-203ENST00000396832 ARF6P62330 175 aa19.32■□□□□ 0.68
CSNK1E-203ENST00000396832 MZT1Q08AG7 82 aa19.32■□□□□ 0.68
CSNK1E-203ENST00000396832 FER1L6-AS1Q8NA97 138 aa19.32■□□□□ 0.68
CSNK1E-203ENST00000396832 ZNF436-AS1Q8NC38 126 aaPredicted RBP19.32■□□□□ 0.68
CSNK1E-203ENST00000396832 NPIPB3Q92617 1050 aa19.32■□□□□ 0.68
CSNK1E-203ENST00000396832 PTPRZ1P23471 2315 aaPredicted RBP19.32■□□□□ 0.68
CSNK1E-203ENST00000396832 SLC25A5P05141 298 aaKnown RBP19.32■□□□□ 0.68
CSNK1E-203ENST00000396832 CCL8P80075 99 aa19.32■□□□□ 0.68
CSNK1E-203ENST00000396832 RUSC1-AS1Q66K80 236 aa19.32■□□□□ 0.68
CSNK1E-203ENST00000396832 C22orf34Q6ZV56 151 aa19.32■□□□□ 0.68
CSNK1E-203ENST00000396832 COX8AP10176 69 aa19.31■□□□□ 0.68
CSNK1E-203ENST00000396832 PRB3Q04118 309 aaPredicted RBP19.31■□□□□ 0.68
CSNK1E-203ENST00000396832 BPIFA4PQ86YQ2 179 aa19.31■□□□□ 0.68
CSNK1E-203ENST00000396832 C1orf162Q8NEQ5 155 aaPredicted RBP19.31■□□□□ 0.68
CSNK1E-203ENST00000396832 ADTRPQ96IZ2 230 aa19.31■□□□□ 0.68
CSNK1E-203ENST00000396832 GPR82Q96P67 336 aa19.31■□□□□ 0.68
CSNK1E-203ENST00000396832 GAFA1Q96PS6 74 aa19.31■□□□□ 0.68
CSNK1E-203ENST00000396832 HSPB8Q9UJY1 196 aa19.31■□□□□ 0.68
CSNK1E-203ENST00000396832 HTR1DP28221 377 aa19.31■□□□□ 0.68
CSNK1E-203ENST00000396832 ATP5IP56385 69 aaPredicted RBP19.31■□□□□ 0.68
CSNK1E-203ENST00000396832 TNFAIP6P98066 277 aaPredicted RBP19.3■□□□□ 0.68
CSNK1E-203ENST00000396832 SEM1Q6ZVN7 128 aa19.3■□□□□ 0.68
CSNK1E-203ENST00000396832 NDFIP1Q9BT67 221 aa19.3■□□□□ 0.68
CSNK1E-203ENST00000396832 TMUB1Q9BVT8 246 aa19.3■□□□□ 0.68
CSNK1E-203ENST00000396832 PRSS22Q9GZN4 317 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms