RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 LINC00869P0C866 280 aa10.63□□□□□ -0.71
VAPB-202ENST00000395802 GPR183P32249 361 aa10.63□□□□□ -0.71
VAPB-202ENST00000395802 ZNF90Q03938 601 aa10.63□□□□□ -0.71
VAPB-202ENST00000395802 OR5AU1Q8NGC0 362 aa10.63□□□□□ -0.71
VAPB-202ENST00000395802 OR10G4Q8NGN3 311 aa10.63□□□□□ -0.71
VAPB-202ENST00000395802 OR10G9Q8NGN4 311 aa10.63□□□□□ -0.71
VAPB-202ENST00000395802 OR10G7Q8NGN6 311 aa10.63□□□□□ -0.71
VAPB-202ENST00000395802 GATAD1Q8WUU5 269 aa10.63□□□□□ -0.71
VAPB-202ENST00000395802 WFDC12Q8WWY7 111 aa10.63□□□□□ -0.71
VAPB-202ENST00000395802 ACTR3CQ9C0K3 210 aaPredicted RBP10.63□□□□□ -0.71
VAPB-202ENST00000395802 KLK15Q9H2R5 256 aa10.63□□□□□ -0.71
VAPB-202ENST00000395802 RNF24Q9Y225 148 aa10.63□□□□□ -0.71
VAPB-202ENST00000395802 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.63□□□□□ -0.71
VAPB-202ENST00000395802 TGOLN2O43493 480 aa10.63□□□□□ -0.71
VAPB-202ENST00000395802 IGKV1-17P01599 117 aa10.63□□□□□ -0.71
VAPB-202ENST00000395802 CTSGP08311 255 aa10.63□□□□□ -0.71
VAPB-202ENST00000395802 H2AFB1P0C5Y9 115 aa10.63□□□□□ -0.71
VAPB-202ENST00000395802 ZNF726P1Q15940 193 aa10.63□□□□□ -0.71
VAPB-202ENST00000395802 ZNF343Q6P1L6 599 aa10.63□□□□□ -0.71
VAPB-202ENST00000395802 CLEC19AQ6UXS0 136 aa10.63□□□□□ -0.71
VAPB-202ENST00000395802 RPP25LQ8N5L8 163 aaKnown RBP10.63□□□□□ -0.71
VAPB-202ENST00000395802 LINC01006Q8NI28 216 aa10.63□□□□□ -0.71
VAPB-202ENST00000395802 RCC1LQ96I51 464 aaKnown RBP10.63□□□□□ -0.71
VAPB-202ENST00000395802 MAST4O15021 2626 aa10.62□□□□□ -0.71
VAPB-202ENST00000395802 CLPSL1A2RUU4 121 aa10.62□□□□□ -0.71
VAPB-202ENST00000395802 F8W735 103 aaPredicted RBP10.62□□□□□ -0.71
VAPB-202ENST00000395802 IGHV3-23P01764 117 aa10.62□□□□□ -0.71
VAPB-202ENST00000395802 PSG1P11464 419 aa10.62□□□□□ -0.71
VAPB-202ENST00000395802 PLP1P60201 277 aa10.62□□□□□ -0.71
VAPB-202ENST00000395802 RHOBP62745 196 aa10.62□□□□□ -0.71
VAPB-202ENST00000395802 SRSF3P84103 164 aaKnown RBP10.62□□□□□ -0.71
VAPB-202ENST00000395802 TIGITQ495A1 244 aa10.62□□□□□ -0.71
VAPB-202ENST00000395802 ZNF600Q6ZNG1 722 aa10.62□□□□□ -0.71
VAPB-202ENST00000395802 SSX7Q7RTT5 188 aa10.62□□□□□ -0.71
VAPB-202ENST00000395802 CCDC140Q96MF4 163 aa10.62□□□□□ -0.71
VAPB-202ENST00000395802 LINC00052Q96N35 136 aa10.62□□□□□ -0.71
VAPB-202ENST00000395802 SCRT1Q9BWW7 348 aa10.62□□□□□ -0.71
VAPB-202ENST00000395802 GNB4Q9HAV0 340 aa10.62□□□□□ -0.71
VAPB-202ENST00000395802 DNAJC4Q9NNZ3 241 aa10.62□□□□□ -0.71
VAPB-202ENST00000395802 S4R3C0 116 aa10.62□□□□□ -0.71
VAPB-202ENST00000395802 TRAV1-1A0A0B4J248 108 aa10.61□□□□□ -0.71
VAPB-202ENST00000395802 COX7A2P2O60397 106 aa10.61□□□□□ -0.71
VAPB-202ENST00000395802 HYPMO75409 117 aa10.61□□□□□ -0.71
VAPB-202ENST00000395802 OR2C1O95371 312 aa10.61□□□□□ -0.71
VAPB-202ENST00000395802 HBE1P02100 147 aa10.61□□□□□ -0.71
VAPB-202ENST00000395802 ZP3P21754 424 aa10.61□□□□□ -0.71
VAPB-202ENST00000395802 ARL3P36405 182 aa10.61□□□□□ -0.71
VAPB-202ENST00000395802 DEFA5Q01523 94 aa10.61□□□□□ -0.71
VAPB-202ENST00000395802 ZNF491Q8N8L2 437 aa10.61□□□□□ -0.71
VAPB-202ENST00000395802 MYOZ3Q8TDC0 251 aa10.61□□□□□ -0.71
VAPB-202ENST00000395802 PEF1Q9UBV8 284 aaKnown RBP10.61□□□□□ -0.71
VAPB-202ENST00000395802 KRBOX1C9JBD0 128 aa10.61□□□□□ -0.71
VAPB-202ENST00000395802 RPLP1P05386 114 aaKnown RBP10.61□□□□□ -0.71
VAPB-202ENST00000395802 CDX1P47902 265 aaPredicted RBP10.61□□□□□ -0.71
VAPB-202ENST00000395802 CDC34P49427 236 aaPredicted RBP10.61□□□□□ -0.71
VAPB-202ENST00000395802 TAS2R45P59539 299 aa10.61□□□□□ -0.71
VAPB-202ENST00000395802 CCL20P78556 96 aa10.61□□□□□ -0.71
VAPB-202ENST00000395802 SFT2D1Q8WV19 159 aa10.61□□□□□ -0.71
VAPB-202ENST00000395802 MBD3L1Q8WWY6 194 aa10.61□□□□□ -0.71
VAPB-202ENST00000395802 MRPL32Q9BYC8 188 aaKnown RBP10.61□□□□□ -0.71
VAPB-202ENST00000395802 RNF114Q9Y508 228 aa10.61□□□□□ -0.71
VAPB-202ENST00000395802 NF1P21359 2839 aa10.6□□□□□ -0.71
VAPB-202ENST00000395802 CTXND1A0A1B0GTU2 59 aa10.6□□□□□ -0.71
VAPB-202ENST00000395802 A0A1B0GV50 99 aa10.6□□□□□ -0.71
VAPB-202ENST00000395802 BMPR1BO00238 502 aa10.6□□□□□ -0.71
VAPB-202ENST00000395802 YIF1AO95070 293 aa10.6□□□□□ -0.71
VAPB-202ENST00000395802 CD5P06127 495 aa10.6□□□□□ -0.71
VAPB-202ENST00000395802 GATA2P23769 480 aaPredicted RBP10.6□□□□□ -0.71
VAPB-202ENST00000395802 C10orf113Q5VZT2 155 aa10.6□□□□□ -0.71
VAPB-202ENST00000395802 OR1B1Q8NGR6 318 aa10.6□□□□□ -0.71
VAPB-202ENST00000395802 RNF125Q96EQ8 232 aa10.6□□□□□ -0.71
VAPB-202ENST00000395802 SEC14L6B5MCN3 397 aa10.59□□□□□ -0.71
VAPB-202ENST00000395802 GGCTO75223 188 aaKnown RBP10.59□□□□□ -0.71
VAPB-202ENST00000395802 IGHV3-11P01762 117 aa10.59□□□□□ -0.71
VAPB-202ENST00000395802 IL4P05112 153 aa10.59□□□□□ -0.71
VAPB-202ENST00000395802 LGALS1P09382 135 aaKnown RBP10.59□□□□□ -0.71
VAPB-202ENST00000395802 OR5G3P0C626 314 aa10.59□□□□□ -0.71
VAPB-202ENST00000395802 ORM2P19652 201 aa10.59□□□□□ -0.71
VAPB-202ENST00000395802 LYZP61626 148 aa10.59□□□□□ -0.71
VAPB-202ENST00000395802 GCSAMLQ5JQS6 135 aa10.59□□□□□ -0.71
VAPB-202ENST00000395802 FAM78BQ5VT40 261 aa10.59□□□□□ -0.71
VAPB-202ENST00000395802 TMEM231Q9H6L2 316 aa10.59□□□□□ -0.71
VAPB-202ENST00000395802 ADMP35318 185 aa10.58□□□□□ -0.72
VAPB-202ENST00000395802 FOXL1Q12952 345 aa10.58□□□□□ -0.72
VAPB-202ENST00000395802 FAM122CQ6P4D5 195 aa10.58□□□□□ -0.72
VAPB-202ENST00000395802 C10orf99Q6UWK7 81 aa10.58□□□□□ -0.72
VAPB-202ENST00000395802 STXBP6Q8NFX7 210 aa10.58□□□□□ -0.72
VAPB-202ENST00000395802 CHRDL1Q9BU40 450 aa10.58□□□□□ -0.72
VAPB-202ENST00000395802 SLC25A22Q9H936 323 aa10.58□□□□□ -0.72
VAPB-202ENST00000395802 FUT9Q9Y231 359 aa10.58□□□□□ -0.72
VAPB-202ENST00000395802 HIGD1AQ9Y241 93 aa10.58□□□□□ -0.72
VAPB-202ENST00000395802 PUS1Q9Y606 427 aaKnown RBP eCLIP10.58□□□□□ -0.72
VAPB-202ENST00000395802 WI2-2373I1.2A0A1W2PRP0 233 aa10.58□□□□□ -0.72
VAPB-202ENST00000395802 MAP1LC3B2A6NCE7 125 aa10.58□□□□□ -0.72
VAPB-202ENST00000395802 HAX1O00165 279 aa10.58□□□□□ -0.72
VAPB-202ENST00000395802 NDUFA4O00483 81 aa10.58□□□□□ -0.72
VAPB-202ENST00000395802 KIAA0141Q14154 515 aaPredicted RBP10.58□□□□□ -0.72
VAPB-202ENST00000395802 GUK1Q16774 197 aa10.58□□□□□ -0.72
VAPB-202ENST00000395802 KHDC1LQ5JSQ8 128 aa10.58□□□□□ -0.72
VAPB-202ENST00000395802 LCN15Q6UWW0 184 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms