RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 OR51S1Q8NGJ8 323 aa11.21□□□□□ -0.61
SNCA-205ENST00000394991 OR4X1Q8NH49 305 aa11.21□□□□□ -0.61
SNCA-205ENST00000394991 NARS2Q96I59 477 aaKnown RBP11.21□□□□□ -0.61
SNCA-205ENST00000394991 SOSTQ9BQB4 213 aa11.21□□□□□ -0.61
SNCA-205ENST00000394991 NIPSNAP3BQ9BS92 247 aa11.21□□□□□ -0.61
SNCA-205ENST00000394991 TMEM189A5PLL7 270 aa11.2□□□□□ -0.62
SNCA-205ENST00000394991 ZNF701M0R085 212 aaPredicted RBP11.2□□□□□ -0.62
SNCA-205ENST00000394991 IGKV1-5P01602 117 aa11.2□□□□□ -0.62
SNCA-205ENST00000394991 HLA-DRB4P13762 266 aa11.2□□□□□ -0.62
SNCA-205ENST00000394991 FXYD7P58549 80 aa11.2□□□□□ -0.62
SNCA-205ENST00000394991 DEFB1P60022 68 aa11.2□□□□□ -0.62
SNCA-205ENST00000394991 TRIM16LQ309B1 348 aa11.2□□□□□ -0.62
SNCA-205ENST00000394991 GDF5OSQ5U4N7 250 aa11.2□□□□□ -0.62
SNCA-205ENST00000394991 TMEM88Q6PEY1 159 aa11.2□□□□□ -0.62
SNCA-205ENST00000394991 SLC35G3Q8N808 338 aa11.2□□□□□ -0.62
SNCA-205ENST00000394991 PRRT1Q99946 306 aa11.2□□□□□ -0.62
SNCA-205ENST00000394991 MCUBQ9NWR8 336 aa11.2□□□□□ -0.62
SNCA-205ENST00000394991 HLA-DRB4X5D2U9 266 aa11.2□□□□□ -0.62
SNCA-205ENST00000394991 DMBT1Q9UGM3 2413 aaPredicted RBP11.2□□□□□ -0.62
SNCA-205ENST00000394991 IGHV3OR16-12A0A075B7B8 117 aa11.19□□□□□ -0.62
SNCA-205ENST00000394991 TEX13DA0A0J9YY54 714 aaPredicted RBP11.19□□□□□ -0.62
SNCA-205ENST00000394991 SMIM9A6NGZ8 99 aa11.19□□□□□ -0.62
SNCA-205ENST00000394991 CORTO00230 105 aa11.19□□□□□ -0.62
SNCA-205ENST00000394991 P0C879 139 aa11.19□□□□□ -0.62
SNCA-205ENST00000394991 OPRK1P41145 380 aa11.19□□□□□ -0.62
SNCA-205ENST00000394991 EIF2B2P49770 351 aaKnown RBP11.19□□□□□ -0.62
SNCA-205ENST00000394991 AKR1C2P52895 323 aa11.19□□□□□ -0.62
SNCA-205ENST00000394991 RTBDNQ9BSG5 229 aaPredicted RBP11.19□□□□□ -0.62
SNCA-205ENST00000394991 SCRT2Q9NQ03 307 aa11.19□□□□□ -0.62
SNCA-205ENST00000394991 RFNGQ9Y644 331 aa11.19□□□□□ -0.62
SNCA-205ENST00000394991 A0A0B4J293 547 aa11.18□□□□□ -0.62
SNCA-205ENST00000394991 ATG12O94817 140 aa11.18□□□□□ -0.62
SNCA-205ENST00000394991 HNRNPCP07910 306 aaKnown RBP eCLIP11.18□□□□□ -0.62
SNCA-205ENST00000394991 SNRPD3P62318 126 aaKnown RBP11.18□□□□□ -0.62
SNCA-205ENST00000394991 OXA1LQ15070 435 aa11.18□□□□□ -0.62
SNCA-205ENST00000394991 SURF2Q15527 256 aaPredicted RBP11.18□□□□□ -0.62
SNCA-205ENST00000394991 RNASE11Q8TAA1 199 aaKnown RBP11.18□□□□□ -0.62
SNCA-205ENST00000394991 SEPSECSQ9HD40 501 aaKnown RBP11.18□□□□□ -0.62
SNCA-205ENST00000394991 SCP2D1Q9UJQ7 156 aa11.18□□□□□ -0.62
SNCA-205ENST00000394991 V9GYH0 126 aa11.18□□□□□ -0.62
SNCA-205ENST00000394991 TEX48A0A1B0GUV7 120 aa11.17□□□□□ -0.62
SNCA-205ENST00000394991 IGKV3-20P01619 116 aa11.17□□□□□ -0.62
SNCA-205ENST00000394991 OR5AC1P0C628 307 aa11.17□□□□□ -0.62
SNCA-205ENST00000394991 IGLC1P0CG04 106 aa11.17□□□□□ -0.62
SNCA-205ENST00000394991 ETV6P41212 452 aa11.17□□□□□ -0.62
SNCA-205ENST00000394991 AP2S1P53680 142 aaPredicted RBP11.17□□□□□ -0.62
SNCA-205ENST00000394991 USF2Q15853 346 aaPredicted RBP11.17□□□□□ -0.62
SNCA-205ENST00000394991 BSXQ3C1V8 233 aa11.17□□□□□ -0.62
SNCA-205ENST00000394991 TOMM5Q8N4H5 51 aa11.17□□□□□ -0.62
SNCA-205ENST00000394991 NAA60Q9H7X0 242 aa11.17□□□□□ -0.62
SNCA-205ENST00000394991 NRN1Q9NPD7 142 aa11.17□□□□□ -0.62
SNCA-205ENST00000394991 GPR132Q9UNW8 380 aa11.17□□□□□ -0.62
SNCA-205ENST00000394991 NBDYA0A0U1RRE5 68 aa11.16□□□□□ -0.62
SNCA-205ENST00000394991 B3GALNT1O75752 331 aa11.16□□□□□ -0.62
SNCA-205ENST00000394991 UCP1P25874 307 aa11.16□□□□□ -0.62
SNCA-205ENST00000394991 FAUP35544 74 aaKnown RBP11.16□□□□□ -0.62
SNCA-205ENST00000394991 HOXA1P49639 335 aaPredicted RBP11.16□□□□□ -0.62
SNCA-205ENST00000394991 SUB1P53999 127 aaKnown RBP eCLIP11.16□□□□□ -0.62
SNCA-205ENST00000394991 FAM3BP58499 235 aaPredicted RBP11.16□□□□□ -0.62
SNCA-205ENST00000394991 ZNF79Q15937 498 aa11.16□□□□□ -0.62
SNCA-205ENST00000394991 CCDC190Q86UF4 302 aa11.16□□□□□ -0.62
SNCA-205ENST00000394991 C6orf223Q8N319 242 aa11.16□□□□□ -0.62
SNCA-205ENST00000394991 ZNF709Q8N972 641 aa11.16□□□□□ -0.62
SNCA-205ENST00000394991 RRNAD1Q96FB5 475 aaKnown RBP11.16□□□□□ -0.62
SNCA-205ENST00000394991 SCGB3A2Q96PL1 93 aa11.16□□□□□ -0.62
SNCA-205ENST00000394991 TMEM222Q9H0R3 208 aa11.16□□□□□ -0.62
SNCA-205ENST00000394991 TRAV30A0A087WSZ9 112 aa11.15□□□□□ -0.62
SNCA-205ENST00000394991 SCGB2A1O75556 95 aa11.15□□□□□ -0.62
SNCA-205ENST00000394991 NKX2-1P43699 371 aaPredicted RBP11.15□□□□□ -0.62
SNCA-205ENST00000394991 AP3S2P59780 193 aa11.15□□□□□ -0.62
SNCA-205ENST00000394991 DHODHQ02127 395 aa11.15□□□□□ -0.62
SNCA-205ENST00000394991 KLF9Q13886 244 aaPredicted RBP11.15□□□□□ -0.62
SNCA-205ENST00000394991 SPANXN2Q5MJ10 180 aa11.15□□□□□ -0.62
SNCA-205ENST00000394991 OR1S2Q8NGQ3 325 aa11.15□□□□□ -0.62
SNCA-205ENST00000394991 ZNRF2Q8NHG8 242 aa11.15□□□□□ -0.62
SNCA-205ENST00000394991 PDCD10Q9BUL8 212 aa11.15□□□□□ -0.62
SNCA-205ENST00000394991 TMED3Q9Y3Q3 217 aa11.15□□□□□ -0.62
SNCA-205ENST00000394991 YTHDF2Q9Y5A9 579 aaKnown RBP11.15□□□□□ -0.62
SNCA-205ENST00000394991 A0A0G2JRQ6 117 aa11.14□□□□□ -0.63
SNCA-205ENST00000394991 CRYM-AS1A6NIL9 109 aa11.14□□□□□ -0.63
SNCA-205ENST00000394991 AKR1C4P17516 323 aa11.14□□□□□ -0.63
SNCA-205ENST00000394991 RND2P52198 227 aa11.14□□□□□ -0.63
SNCA-205ENST00000394991 PRSS54Q6PEW0 395 aa11.14□□□□□ -0.63
SNCA-205ENST00000394991 SIGLEC15Q6ZMC9 328 aa11.14□□□□□ -0.63
SNCA-205ENST00000394991 C1orf158Q8N1D5 194 aa11.14□□□□□ -0.63
SNCA-205ENST00000394991 GLYATL2Q8WU03 294 aa11.14□□□□□ -0.63
SNCA-205ENST00000394991 TRIM63Q969Q1 353 aa11.14□□□□□ -0.63
SNCA-205ENST00000394991 SLC35B3Q9H1N7 401 aa11.14□□□□□ -0.63
SNCA-205ENST00000394991 LOC102723971A0A1B0GUV8 181 aa11.13□□□□□ -0.63
SNCA-205ENST00000394991 BUB3O43684 328 aa11.13□□□□□ -0.63
SNCA-205ENST00000394991 CDS2O95674 445 aa11.13□□□□□ -0.63
SNCA-205ENST00000394991 IL4P05112 153 aa11.13□□□□□ -0.63
SNCA-205ENST00000394991 INPP1P49441 399 aa11.13□□□□□ -0.63
SNCA-205ENST00000394991 YPEL3P61236 119 aaPredicted RBP11.13□□□□□ -0.63
SNCA-205ENST00000394991 TMEM268Q5VZI3 342 aa11.13□□□□□ -0.63
SNCA-205ENST00000394991 SPATA12Q7Z6I5 190 aa11.13□□□□□ -0.63
SNCA-205ENST00000394991 SELENOHQ8IZQ5 122 aaKnown RBP11.13□□□□□ -0.63
SNCA-205ENST00000394991 C15orf53Q8NAA6 179 aa11.13□□□□□ -0.63
SNCA-205ENST00000394991 LHFPL5Q8TAF8 219 aa11.13□□□□□ -0.63
SNCA-205ENST00000394991 Q8WTZ3 238 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms