RNA–Protein interactions for RNA: ENST00000393585.6

CASP3-202, Transcript of caspase 3, humanhuman

TSL 1 (best) BASIC

Gene CASP3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-202ENST00000393585 BIN3Q9NQY0 253 aa8.67□□□□□ -1.02
CASP3-202ENST00000393585 ELOA3CA0A087WX78 387 aaPredicted RBP8.66□□□□□ -1.02
CASP3-202ENST00000393585 IGHV7-81A0A0B4J1V7 117 aa8.66□□□□□ -1.02
CASP3-202ENST00000393585 TRAV40A0A0B4J280 105 aa8.66□□□□□ -1.02
CASP3-202ENST00000393585 SH2D7A6NKC9 451 aaPredicted RBP8.66□□□□□ -1.02
CASP3-202ENST00000393585 IGKV1-17P01599 117 aa8.66□□□□□ -1.02
CASP3-202ENST00000393585 GALR1P47211 349 aa8.66□□□□□ -1.02
CASP3-202ENST00000393585 PAX8Q06710 450 aa8.66□□□□□ -1.02
CASP3-202ENST00000393585 FANCD2OSQ96PS1 177 aa8.66□□□□□ -1.02
CASP3-202ENST00000393585 RASL11BQ9BPW5 248 aa8.66□□□□□ -1.02
CASP3-202ENST00000393585 HSPB9Q9BQS6 159 aa8.66□□□□□ -1.02
CASP3-202ENST00000393585 POLR3KQ9Y2Y1 108 aaPredicted RBP8.66□□□□□ -1.02
CASP3-202ENST00000393585 ARL2-SNX15V9GYD0 113 aa8.66□□□□□ -1.02
CASP3-202ENST00000393585 HYPMO75409 117 aa8.66□□□□□ -1.02
CASP3-202ENST00000393585 PFN1P07737 140 aaKnown RBP8.66□□□□□ -1.02
CASP3-202ENST00000393585 BRS3P32247 399 aa8.66□□□□□ -1.02
CASP3-202ENST00000393585 A0A1W2PRE2 83 aa8.65□□□□□ -1.02
CASP3-202ENST00000393585 NDUFS8O00217 210 aa8.65□□□□□ -1.02
CASP3-202ENST00000393585 TRGC2P03986 189 aa8.65□□□□□ -1.02
CASP3-202ENST00000393585 S100A6P06703 90 aa8.65□□□□□ -1.02
CASP3-202ENST00000393585 EGR2P11161 476 aaPredicted RBP8.65□□□□□ -1.02
CASP3-202ENST00000393585 BLNKQ8WV28 456 aa8.65□□□□□ -1.02
CASP3-202ENST00000393585 FXYD5Q96DB9 178 aa8.65□□□□□ -1.02
CASP3-202ENST00000393585 OR5B12Q96R08 314 aa8.65□□□□□ -1.02
CASP3-202ENST00000393585 A0A1W2PPQ1 181 aa8.65□□□□□ -1.03
CASP3-202ENST00000393585 H3BTX0 84 aa8.65□□□□□ -1.03
CASP3-202ENST00000393585 K7EN84 100 aa8.65□□□□□ -1.03
CASP3-202ENST00000393585 C1RLQ9NZP8 487 aa8.65□□□□□ -1.03
CASP3-202ENST00000393585 ANKRD17O75179 2603 aaKnown RBP8.64□□□□□ -1.03
CASP3-202ENST00000393585 IGLV11-55A0A075B6I3 123 aa8.64□□□□□ -1.03
CASP3-202ENST00000393585 TRBV24-1A0A075B6N3 115 aa8.64□□□□□ -1.03
CASP3-202ENST00000393585 MDFIC2A0A1B0GVS7 189 aa8.64□□□□□ -1.03
CASP3-202ENST00000393585 NPIPB5A8MRT5 1133 aa8.64□□□□□ -1.03
CASP3-202ENST00000393585 IGHV3-23P01764 117 aa8.64□□□□□ -1.03
CASP3-202ENST00000393585 MEOX2P50222 304 aa8.64□□□□□ -1.03
CASP3-202ENST00000393585 TMEM219Q86XT9 240 aa8.64□□□□□ -1.03
CASP3-202ENST00000393585 C1QL4Q86Z23 238 aa8.64□□□□□ -1.03
CASP3-202ENST00000393585 SFRP2Q96HF1 295 aa8.64□□□□□ -1.03
CASP3-202ENST00000393585 SOX21Q9Y651 276 aaPredicted RBP8.64□□□□□ -1.03
CASP3-202ENST00000393585 HELTA6NFD8 242 aa8.64□□□□□ -1.03
CASP3-202ENST00000393585 OR2J3O76001 311 aa8.64□□□□□ -1.03
CASP3-202ENST00000393585 RD3LP0DJH9 198 aa8.64□□□□□ -1.03
CASP3-202ENST00000393585 FAM3BP58499 235 aaPredicted RBP8.64□□□□□ -1.03
CASP3-202ENST00000393585 PLP1P60201 277 aa8.64□□□□□ -1.03
CASP3-202ENST00000393585 RANP62826 216 aaKnown RBP8.64□□□□□ -1.03
CASP3-202ENST00000393585 OR5I1Q13606 314 aa8.64□□□□□ -1.03
CASP3-202ENST00000393585 ECSCRQ19T08 205 aa8.64□□□□□ -1.03
CASP3-202ENST00000393585 CENPWQ5EE01 88 aa8.64□□□□□ -1.03
CASP3-202ENST00000393585 TTC9CQ8N5M4 171 aa8.64□□□□□ -1.03
CASP3-202ENST00000393585 OR1L6Q8NGR2 347 aa8.64□□□□□ -1.03
CASP3-202ENST00000393585 LINC00479Q96M42 142 aa8.64□□□□□ -1.03
CASP3-202ENST00000393585 HIGD1AQ9Y241 93 aa8.64□□□□□ -1.03
CASP3-202ENST00000393585 USP9YO00507 2555 aaPredicted RBP8.63□□□□□ -1.03
CASP3-202ENST00000393585 PTPN13Q12923 2485 aa8.63□□□□□ -1.03
CASP3-202ENST00000393585 A0A0U1RQK1 487 aa8.63□□□□□ -1.03
CASP3-202ENST00000393585 LINC00587B1AMM8 73 aa8.63□□□□□ -1.03
CASP3-202ENST00000393585 HLA-DRB1P01911 266 aa8.63□□□□□ -1.03
CASP3-202ENST00000393585 IGHV4-38-2P0DP08 117 aa8.63□□□□□ -1.03
CASP3-202ENST00000393585 COX6B1P14854 86 aa8.63□□□□□ -1.03
CASP3-202ENST00000393585 S100PP25815 95 aa8.63□□□□□ -1.03
CASP3-202ENST00000393585 IGHV1-69DA0A0B4J2H0 117 aa8.63□□□□□ -1.03
CASP3-202ENST00000393585 C5orf52A6NGY3 159 aa8.63□□□□□ -1.03
CASP3-202ENST00000393585 A6NJY4 79 aa8.63□□□□□ -1.03
CASP3-202ENST00000393585 LINC01548A6NM66 108 aa8.63□□□□□ -1.03
CASP3-202ENST00000393585 C9JCJ5 164 aa8.63□□□□□ -1.03
CASP3-202ENST00000393585 SMAD7O15105 426 aaKnown RBP8.63□□□□□ -1.03
CASP3-202ENST00000393585 ATP6V0E1O15342 81 aa8.63□□□□□ -1.03
CASP3-202ENST00000393585 IGHV1-69P01742 117 aa8.63□□□□□ -1.03
CASP3-202ENST00000393585 COL8A1P27658 744 aa8.63□□□□□ -1.03
CASP3-202ENST00000393585 GNG4P50150 75 aa8.63□□□□□ -1.03
CASP3-202ENST00000393585 TEX38Q6PEX7 206 aa8.63□□□□□ -1.03
CASP3-202ENST00000393585 C16orf54Q6UWD8 224 aa8.63□□□□□ -1.03
CASP3-202ENST00000393585 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.62□□□□□ -1.03
CASP3-202ENST00000393585 GNG7O60262 68 aa8.62□□□□□ -1.03
CASP3-202ENST00000393585 NDUFB8O95169 186 aa8.62□□□□□ -1.03
CASP3-202ENST00000393585 GP9P14770 177 aa8.62□□□□□ -1.03
CASP3-202ENST00000393585 GNG5P63218 68 aa8.62□□□□□ -1.03
CASP3-202ENST00000393585 SLC25A39Q9BZJ4 359 aaPredicted RBP8.62□□□□□ -1.03
CASP3-202ENST00000393585 TRAV20A0A0B4J274 112 aa8.62□□□□□ -1.03
CASP3-202ENST00000393585 F8W735 103 aaPredicted RBP8.62□□□□□ -1.03
CASP3-202ENST00000393585 IL4P05112 153 aa8.62□□□□□ -1.03
CASP3-202ENST00000393585 MSMBP08118 114 aa8.62□□□□□ -1.03
CASP3-202ENST00000393585 NBEAP1P0C6P0 100 aa8.62□□□□□ -1.03
CASP3-202ENST00000393585 FABP9Q0Z7S8 132 aa8.62□□□□□ -1.03
CASP3-202ENST00000393585 Q56UQ5 140 aa8.62□□□□□ -1.03
CASP3-202ENST00000393585 UNQ5815/PRO19632Q6UWF5 114 aa8.62□□□□□ -1.03
CASP3-202ENST00000393585 ZNF329Q86UD4 541 aa8.62□□□□□ -1.03
CASP3-202ENST00000393585 NHLRC2Q8NBF2 726 aa8.62□□□□□ -1.03
CASP3-202ENST00000393585 C7orf69Q9H7B7 122 aa8.62□□□□□ -1.03
CASP3-202ENST00000393585 ABCA12Q86UK0 2595 aa8.61□□□□□ -1.03
CASP3-202ENST00000393585 ZANQ9Y493 2812 aa8.61□□□□□ -1.03
CASP3-202ENST00000393585 NBPF19A0A087WUL8 3843 aa8.61□□□□□ -1.03
CASP3-202ENST00000393585 TRAV34A0A0B4J273 112 aa8.61□□□□□ -1.03
CASP3-202ENST00000393585 G3V318 75 aa8.61□□□□□ -1.03
CASP3-202ENST00000393585 SLC17A3O00476 420 aa8.61□□□□□ -1.03
CASP3-202ENST00000393585 CD99P14209 185 aa8.61□□□□□ -1.03
CASP3-202ENST00000393585 MFAP4P55083 255 aa8.61□□□□□ -1.03
CASP3-202ENST00000393585 ZNF600Q6ZNG1 722 aa8.61□□□□□ -1.03
CASP3-202ENST00000393585 BCL6BQ8N143 479 aaPredicted RBP8.61□□□□□ -1.03
CASP3-202ENST00000393585 ZNF491Q8N8L2 437 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms