RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 TMEM158Q8WZ71 300 aa13.37□□□□□ -0.27
SHANK1-204ENST00000391814 YPEL1O60688 119 aa13.37□□□□□ -0.27
SHANK1-204ENST00000391814 ATP5J2P56134 94 aa13.37□□□□□ -0.27
SHANK1-204ENST00000391814 YPEL2Q96QA6 119 aa13.37□□□□□ -0.27
SHANK1-204ENST00000391814 SBF2Q86WG5 1849 aa13.37□□□□□ -0.27
SHANK1-204ENST00000391814 IGHV3-11P01762 117 aa13.37□□□□□ -0.27
SHANK1-204ENST00000391814 A0A1B0GWJ7 208 aa13.37□□□□□ -0.27
SHANK1-204ENST00000391814 SH2D1AO60880 128 aa13.37□□□□□ -0.27
SHANK1-204ENST00000391814 CDPF1Q6NVV7 123 aa13.37□□□□□ -0.27
SHANK1-204ENST00000391814 K7EP34 96 aa13.37□□□□□ -0.27
SHANK1-204ENST00000391814 PVRIGQ6DKI7 326 aa13.37□□□□□ -0.27
SHANK1-204ENST00000391814 MBNL3Q9NUK0 354 aaKnown RBP13.37□□□□□ -0.27
SHANK1-204ENST00000391814 CD24P25063 80 aa13.36□□□□□ -0.27
SHANK1-204ENST00000391814 PDLIM4P50479 330 aa13.36□□□□□ -0.27
SHANK1-204ENST00000391814 K7EP13 123 aa13.36□□□□□ -0.27
SHANK1-204ENST00000391814 ATP1A1-AS1Q5TC04 95 aa13.36□□□□□ -0.27
SHANK1-204ENST00000391814 IQCF6A8MYZ5 107 aa13.36□□□□□ -0.27
SHANK1-204ENST00000391814 TOMM40O96008 361 aa13.36□□□□□ -0.27
SHANK1-204ENST00000391814 IGHV2-5P01817 119 aa13.36□□□□□ -0.27
SHANK1-204ENST00000391814 FAM90A9PA6NNJ1 464 aa13.36□□□□□ -0.27
SHANK1-204ENST00000391814 IFITM1P13164 125 aa13.36□□□□□ -0.27
SHANK1-204ENST00000391814 LINC00158P58513 81 aa13.36□□□□□ -0.27
SHANK1-204ENST00000391814 SPAG17Q6Q759 2223 aa13.36□□□□□ -0.27
SHANK1-204ENST00000391814 MYO7AQ13402 2215 aa13.36□□□□□ -0.27
SHANK1-204ENST00000391814 DUTP33316 252 aaKnown RBP13.36□□□□□ -0.27
SHANK1-204ENST00000391814 PSG7Q13046 419 aa13.36□□□□□ -0.27
SHANK1-204ENST00000391814 SPSB3Q6PJ21 355 aa13.36□□□□□ -0.27
SHANK1-204ENST00000391814 DNAJC13O75165 2243 aa13.36□□□□□ -0.27
SHANK1-204ENST00000391814 CECR9P0C854 216 aa13.35□□□□□ -0.27
SHANK1-204ENST00000391814 SLC25A45Q8N413 288 aa13.35□□□□□ -0.27
SHANK1-204ENST00000391814 WBP1Q96G27 269 aa13.35□□□□□ -0.27
SHANK1-204ENST00000391814 ITGB1BP1O14713 200 aa13.35□□□□□ -0.27
SHANK1-204ENST00000391814 CCL19Q99731 98 aa13.35□□□□□ -0.27
SHANK1-204ENST00000391814 H3BMM0 161 aa13.35□□□□□ -0.27
SHANK1-204ENST00000391814 Q0VG73 95 aa13.35□□□□□ -0.27
SHANK1-204ENST00000391814 ZNF474Q6S9Z5 364 aaPredicted RBP13.35□□□□□ -0.27
SHANK1-204ENST00000391814 UBE2WQ96B02 151 aa13.35□□□□□ -0.27
SHANK1-204ENST00000391814 ZNF625Q96I27 306 aaPredicted RBP13.35□□□□□ -0.27
SHANK1-204ENST00000391814 IGKV1-12A0A0C4DH73 117 aa13.35□□□□□ -0.27
SHANK1-204ENST00000391814 IGKV1D-12P01611 117 aa13.35□□□□□ -0.27
SHANK1-204ENST00000391814 PARP14Q460N5 1801 aa13.35□□□□□ -0.27
SHANK1-204ENST00000391814 NMSQ5H8A3 153 aa13.34□□□□□ -0.27
SHANK1-204ENST00000391814 RNF144BQ7Z419 303 aa13.34□□□□□ -0.27
SHANK1-204ENST00000391814 ZNF329Q86UD4 541 aa13.34□□□□□ -0.27
SHANK1-204ENST00000391814 CCL3L1P16619 93 aa13.34□□□□□ -0.27
SHANK1-204ENST00000391814 NHSL1Q5SYE7 1610 aa13.34□□□□□ -0.27
SHANK1-204ENST00000391814 J3QW42 95 aa13.34□□□□□ -0.27
SHANK1-204ENST00000391814 COLQQ9Y215 455 aaPredicted RBP13.34□□□□□ -0.27
SHANK1-204ENST00000391814 IGKV1-27A0A075B6S5 117 aa13.34□□□□□ -0.27
SHANK1-204ENST00000391814 TRAV3A0A0B4J244 114 aa13.34□□□□□ -0.27
SHANK1-204ENST00000391814 TCF15Q12870 199 aa13.34□□□□□ -0.27
SHANK1-204ENST00000391814 C10orf91Q5T1B1 145 aa13.34□□□□□ -0.27
SHANK1-204ENST00000391814 LY96Q9Y6Y9 160 aa13.34□□□□□ -0.27
SHANK1-204ENST00000391814 SELLP14151 372 aa13.34□□□□□ -0.27
SHANK1-204ENST00000391814 UBE2DNLQ8IWF7 75 aa13.34□□□□□ -0.27
SHANK1-204ENST00000391814 SLC50A1Q9BRV3 221 aa13.34□□□□□ -0.27
SHANK1-204ENST00000391814 TRAV40A0A0B4J280 105 aa13.33□□□□□ -0.28
SHANK1-204ENST00000391814 IGKV1-5P01602 117 aa13.33□□□□□ -0.28
SHANK1-204ENST00000391814 LINC01560Q8TB33 94 aa13.33□□□□□ -0.28
SHANK1-204ENST00000391814 LINC01559Q495D7 138 aa13.33□□□□□ -0.28
SHANK1-204ENST00000391814 Q6ZT83 130 aa13.33□□□□□ -0.28
SHANK1-204ENST00000391814 FGFBP3Q8TAT2 258 aa13.33□□□□□ -0.28
SHANK1-204ENST00000391814 GAGE12HA6NDE8 117 aa13.33□□□□□ -0.28
SHANK1-204ENST00000391814 IGHV1-2P23083 117 aa13.33□□□□□ -0.28
SHANK1-204ENST00000391814 ZNF415Q09FC8 603 aa13.33□□□□□ -0.28
SHANK1-204ENST00000391814 IGHV2OR16-5A0A0B4J2B6 119 aa13.33□□□□□ -0.28
SHANK1-204ENST00000391814 IGLC2P0DOY2 106 aa13.33□□□□□ -0.28
SHANK1-204ENST00000391814 IGLC3P0DOY3 106 aa13.33□□□□□ -0.28
SHANK1-204ENST00000391814 LINC00312Q9Y6C7 94 aa13.33□□□□□ -0.28
SHANK1-204ENST00000391814 C3orf36Q3SXR2 165 aa13.33□□□□□ -0.28
SHANK1-204ENST00000391814 IGHV3-73A0A0B4J1V6 119 aa13.32□□□□□ -0.28
SHANK1-204ENST00000391814 PMS2P5A8MQ11 134 aa13.32□□□□□ -0.28
SHANK1-204ENST00000391814 NTF4P34130 210 aa13.32□□□□□ -0.28
SHANK1-204ENST00000391814 SRSF7Q16629 238 aaKnown RBP eCLIP13.32□□□□□ -0.28
SHANK1-204ENST00000391814 SLC25A39Q9BZJ4 359 aaPredicted RBP13.32□□□□□ -0.28
SHANK1-204ENST00000391814 RPUSD1Q9UJJ7 312 aaKnown RBP13.32□□□□□ -0.28
SHANK1-204ENST00000391814 S100A7L2Q5SY68 101 aa13.32□□□□□ -0.28
SHANK1-204ENST00000391814 MESP1Q9BRJ9 268 aa13.32□□□□□ -0.28
SHANK1-204ENST00000391814 C5orf67F2Z3F1 127 aa13.32□□□□□ -0.28
SHANK1-204ENST00000391814 SHANK3Q9BYB0 1731 aa13.32□□□□□ -0.28
SHANK1-204ENST00000391814 ZNF581Q9P0T4 197 aa13.32□□□□□ -0.28
SHANK1-204ENST00000391814 CDK2AP2O75956 126 aa13.31□□□□□ -0.28
SHANK1-204ENST00000391814 SRD5A1P18405 259 aa13.31□□□□□ -0.28
SHANK1-204ENST00000391814 ZC2HC1BQ5TFG8 222 aa13.31□□□□□ -0.28
SHANK1-204ENST00000391814 PLEKHB2Q96CS7 222 aa13.31□□□□□ -0.28
SHANK1-204ENST00000391814 SRSF8Q9BRL6 282 aaKnown RBP13.31□□□□□ -0.28
SHANK1-204ENST00000391814 TMEM8BA6NDV4 472 aa13.31□□□□□ -0.28
SHANK1-204ENST00000391814 AMN1Q8IY45 258 aa13.31□□□□□ -0.28
SHANK1-204ENST00000391814 RALGAPA2Q2PPJ7 1873 aa13.31□□□□□ -0.28
SHANK1-204ENST00000391814 F8W1H4 67 aa13.31□□□□□ -0.28
SHANK1-204ENST00000391814 MYOD1P15172 320 aa13.31□□□□□ -0.28
SHANK1-204ENST00000391814 DEFB121Q5J5C9 76 aa13.31□□□□□ -0.28
SHANK1-204ENST00000391814 CRPP02741 224 aa13.31□□□□□ -0.28
SHANK1-204ENST00000391814 TMEM14EPQ6UXP3 125 aa13.31□□□□□ -0.28
SHANK1-204ENST00000391814 DPM3Q9P2X0 92 aa13.31□□□□□ -0.28
SHANK1-204ENST00000391814 RPL15P61313 204 aaKnown RBP13.3□□□□□ -0.28
SHANK1-204ENST00000391814 RNF115Q9Y4L5 304 aa13.3□□□□□ -0.28
SHANK1-204ENST00000391814 ADARB2-AS1A8MUL3 147 aa13.3□□□□□ -0.28
SHANK1-204ENST00000391814 CDKN1BP46527 198 aa13.3□□□□□ -0.28
SHANK1-204ENST00000391814 NABP1Q96AH0 204 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms