RNA–Protein interactions for RNA: ENST00000390498.1

TRAJ39-201, Transcript of T cell receptor alpha joining 39, humanhuman

APPRIS P1 BASIC

Gene TRAJ39, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ39-201ENST00000390498 PLXND1Q9Y4D7 1925 aa0.95□□□□□ -2.26
TRAJ39-201ENST00000390498 WDR90Q96KV7 1748 aa0.95□□□□□ -2.26
TRAJ39-201ENST00000390498 CACNA1SQ13698 1873 aa0.95□□□□□ -2.26
TRAJ39-201ENST00000390498 NUP210LQ5VU65 1888 aa0.95□□□□□ -2.26
TRAJ39-201ENST00000390498 ARHGEF11O15085 1522 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 XIRP1Q702N8 1843 aaKnown RBP0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 SLX4Q8IY92 1834 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 TAF1LQ8IZX4 1826 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 CEP164Q9UPV0 1460 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 RIMBP3CA6NJZ7 1639 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 RIMBP3BA6NNM3 1639 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 RIMBP3Q9UFD9 1639 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 LCTP09848 1927 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 ATG2BQ96BY7 2078 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 IGHV1-18A0A0C4DH31 117 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 IGHV1-58A0A0C4DH39 117 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 A0A1W2PNM2 257 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 ODAMA1E959 279 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 C5orf58C9J3I9 102 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 C9JAW5 83 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 J3QQQ9 107 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 K7EP13 123 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 SDCBPO00560 298 aaPredicted RBP0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 LYZL6O75951 148 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 TNFSF15O95150 251 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 CLPSP04118 112 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 IFNA4P05014 189 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 CXCL1P09341 107 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 METTL15P1P0C7V9 234 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 FABP2P12104 132 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 HLA-EP13747 358 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 EVI2AP22794 236 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 CMPK1P30085 196 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 RPL35P42766 123 aaKnown RBP0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 TMBIM6P55061 237 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 ARPP19P56211 112 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 LINC00315P59091 139 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 KRTAP10-12P60413 245 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 HBBP68871 147 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 ZNF90Q03938 601 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 SLC38A11Q08AI6 406 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 DEFB134Q4QY38 66 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 KRTAP13-2Q52LG2 175 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 PYDC2Q56P42 97 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 EIF5AL1Q6IS14 154 aaKnown RBP0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 RPL13AP3Q6NVV1 102 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 PDZD9Q8IXQ8 264 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 LRRC18Q8N456 261 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 SLC30A7Q8NEW0 376 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 OR4E2Q8NGC2 313 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 OR51A4Q8NGJ6 313 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 OR5D16Q8NGK9 328 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 MAGOHBQ96A72 148 aaKnown RBP0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 MRPS24Q96EL2 167 aaKnown RBP0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 MCEEQ96PE7 176 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 CGREF1Q99674 301 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 LINC00467Q9BRT7 94 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 PRADC1Q9BSG0 188 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 CACYBPQ9HB71 228 aaKnown RBP0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 MARCOQ9UEW3 520 aaPredicted RBP0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 HIGD1AQ9Y241 93 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 HS3ST2Q9Y278 367 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 RNF11Q9Y3C5 154 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 ARHGEF28Q8N1W1 1705 aaKnown RBP0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 PCM1Q15154 2024 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 CROCCQ5TZA2 2017 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 RFX7Q2KHR2 1363 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 RTL9Q8NET4 1388 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 KDM5BQ9UGL1 1544 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 NISCHQ9Y2I1 1504 aa0.94□□□□□ -2.26
TRAJ39-201ENST00000390498 PTPRSQ13332 1948 aa0.93□□□□□ -2.26
TRAJ39-201ENST00000390498 TCOF1Q13428 1488 aaKnown RBP0.93□□□□□ -2.26
TRAJ39-201ENST00000390498 SCAF11Q99590 1463 aaKnown RBP0.93□□□□□ -2.26
TRAJ39-201ENST00000390498 ANKRD31Q8N7Z5 1873 aa0.93□□□□□ -2.26
TRAJ39-201ENST00000390498 NUP210Q8TEM1 1887 aaPredicted RBP0.93□□□□□ -2.26
TRAJ39-201ENST00000390498 OVOS2A0A0J9YW53 1432 aa0.93□□□□□ -2.26
TRAJ39-201ENST00000390498 OVOS2Q6IE36 1432 aa0.93□□□□□ -2.26
TRAJ39-201ENST00000390498 A0A096LPI6 279 aa0.93□□□□□ -2.26
TRAJ39-201ENST00000390498 MUC21A0A0G2JKD1 596 aa0.93□□□□□ -2.26
TRAJ39-201ENST00000390498 LOC107984640A0A0U1RRK4 108 aa0.93□□□□□ -2.26
TRAJ39-201ENST00000390498 MUC21A0A140T8X8 626 aa0.93□□□□□ -2.26
TRAJ39-201ENST00000390498 A0A1B0GW64 132 aa0.93□□□□□ -2.26
TRAJ39-201ENST00000390498 OR51F1A6NGY5 319 aa0.93□□□□□ -2.26
TRAJ39-201ENST00000390498 A8MWV9 139 aa0.93□□□□□ -2.26
TRAJ39-201ENST00000390498 ODF3BA8MYP8 253 aa0.93□□□□□ -2.26
TRAJ39-201ENST00000390498 LY6LH3BQJ8 138 aa0.93□□□□□ -2.26
TRAJ39-201ENST00000390498 RTL8CO15255 209 aa0.93□□□□□ -2.26
TRAJ39-201ENST00000390498 TPST1O60507 370 aa0.93□□□□□ -2.26
TRAJ39-201ENST00000390498 PGLYRP1O75594 196 aaPredicted RBP0.93□□□□□ -2.26
TRAJ39-201ENST00000390498 NAPSAO96009 420 aa0.93□□□□□ -2.26
TRAJ39-201ENST00000390498 C1QCP02747 245 aa0.93□□□□□ -2.26
TRAJ39-201ENST00000390498 RPL22P35268 128 aaKnown RBP0.93□□□□□ -2.26
TRAJ39-201ENST00000390498 DYNLT1P63172 113 aa0.93□□□□□ -2.26
TRAJ39-201ENST00000390498 PRR9Q5T870 116 aa0.93□□□□□ -2.26
TRAJ39-201ENST00000390498 Q5XG85 94 aa0.93□□□□□ -2.26
TRAJ39-201ENST00000390498 LCN15Q6UWW0 184 aa0.93□□□□□ -2.26
TRAJ39-201ENST00000390498 SOSTDC1Q6X4U4 206 aa0.93□□□□□ -2.26
TRAJ39-201ENST00000390498 AAED1Q7RTV5 226 aa0.93□□□□□ -2.26
TRAJ39-201ENST00000390498 LINC00305Q7Z4B0 112 aa0.93□□□□□ -2.26
TRAJ39-201ENST00000390498 SH2D6Q7Z4S9 175 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 169.7 ms