RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 GPHB5Q86YW7 130 aa4.34□□□□□ -1.71
TRAV35-201ENST00000390462 ACOT12Q8WYK0 555 aa4.34□□□□□ -1.71
TRAV35-201ENST00000390462 ELSPBP1Q96BH3 223 aa4.34□□□□□ -1.71
TRAV35-201ENST00000390462 PEBP4Q96S96 227 aa4.34□□□□□ -1.71
TRAV35-201ENST00000390462 SPIN2AQ99865 258 aa4.34□□□□□ -1.71
TRAV35-201ENST00000390462 SPIN2BQ9BPZ2 258 aa4.34□□□□□ -1.71
TRAV35-201ENST00000390462 TMEM126AQ9H061 195 aa4.34□□□□□ -1.71
TRAV35-201ENST00000390462 COPZ2Q9P299 210 aa4.34□□□□□ -1.71
TRAV35-201ENST00000390462 RPUSD1Q9UJJ7 312 aaKnown RBP4.34□□□□□ -1.71
TRAV35-201ENST00000390462 OBSL1O75147 1896 aa4.34□□□□□ -1.71
TRAV35-201ENST00000390462 ITPR3Q14573 2671 aa4.34□□□□□ -1.72
TRAV35-201ENST00000390462 FLNCQ14315 2725 aa4.33□□□□□ -1.72
TRAV35-201ENST00000390462 BORCS7-ASMTA0A0B4J1R7 106 aa4.33□□□□□ -1.72
TRAV35-201ENST00000390462 TMEM269A0A1B0GVZ9 245 aa4.33□□□□□ -1.72
TRAV35-201ENST00000390462 A0A1B0GX51 115 aa4.33□□□□□ -1.72
TRAV35-201ENST00000390462 ZNF98A6NK75 572 aa4.33□□□□□ -1.72
TRAV35-201ENST00000390462 J3QRK9 145 aa4.33□□□□□ -1.72
TRAV35-201ENST00000390462 K7ERS5 55 aa4.33□□□□□ -1.72
TRAV35-201ENST00000390462 FAM107AO95990 144 aa4.33□□□□□ -1.72
TRAV35-201ENST00000390462 ZNF705DP0CH99 300 aaPredicted RBP4.33□□□□□ -1.72
TRAV35-201ENST00000390462 OGNP20774 298 aaKnown RBP4.33□□□□□ -1.72
TRAV35-201ENST00000390462 ZNF616Q08AN1 781 aa4.33□□□□□ -1.72
TRAV35-201ENST00000390462 DHRS2Q13268 280 aa4.33□□□□□ -1.72
TRAV35-201ENST00000390462 FAM104BQ5XKR9 115 aa4.33□□□□□ -1.72
TRAV35-201ENST00000390462 ZFP1Q6P2D0 407 aa4.33□□□□□ -1.72
TRAV35-201ENST00000390462 AGTRAPQ6RW13 159 aa4.33□□□□□ -1.72
TRAV35-201ENST00000390462 WDR86Q86TI4 376 aa4.33□□□□□ -1.72
TRAV35-201ENST00000390462 AMN1Q8IY45 258 aa4.33□□□□□ -1.72
TRAV35-201ENST00000390462 TMEM86AQ8N2M4 240 aa4.33□□□□□ -1.72
TRAV35-201ENST00000390462 NUP35Q8NFH5 326 aa4.33□□□□□ -1.72
TRAV35-201ENST00000390462 FAM60AQ9NP50 221 aa4.33□□□□□ -1.72
TRAV35-201ENST00000390462 AMMECR1Q9Y4X0 333 aaPredicted RBP4.33□□□□□ -1.72
TRAV35-201ENST00000390462 TMEM14AQ9Y6G1 99 aa4.33□□□□□ -1.72
TRAV35-201ENST00000390462 CREBBPQ92793 2442 aa4.33□□□□□ -1.72
TRAV35-201ENST00000390462 CHD5Q8TDI0 1954 aa4.33□□□□□ -1.72
TRAV35-201ENST00000390462 NOTCH2Q04721 2471 aa4.32□□□□□ -1.72
TRAV35-201ENST00000390462 BSNQ9UPA5 3926 aa4.32□□□□□ -1.72
TRAV35-201ENST00000390462 IGHV3-21A0A0B4J1V1 117 aa4.32□□□□□ -1.72
TRAV35-201ENST00000390462 A0A1B0GV90 55 aa4.32□□□□□ -1.72
TRAV35-201ENST00000390462 PLA2G10O15496 165 aa4.32□□□□□ -1.72
TRAV35-201ENST00000390462 SRP19P09132 144 aaKnown RBP4.32□□□□□ -1.72
TRAV35-201ENST00000390462 PTHLHP12272 177 aa4.32□□□□□ -1.72
TRAV35-201ENST00000390462 IL1RNP18510 177 aa4.32□□□□□ -1.72
TRAV35-201ENST00000390462 ELK1P19419 428 aa4.32□□□□□ -1.72
TRAV35-201ENST00000390462 RPS3P23396 243 aaKnown RBP eCLIP4.32□□□□□ -1.72
TRAV35-201ENST00000390462 NPY1RP25929 384 aa4.32□□□□□ -1.72
TRAV35-201ENST00000390462 ATP6V0CP27449 155 aa4.32□□□□□ -1.72
TRAV35-201ENST00000390462 PIGPP57054 158 aa4.32□□□□□ -1.72
TRAV35-201ENST00000390462 TAS2R45P59539 299 aa4.32□□□□□ -1.72
TRAV35-201ENST00000390462 ENDOGQ14249 297 aaKnown RBP4.32□□□□□ -1.72
TRAV35-201ENST00000390462 OR4K13Q8NH42 304 aa4.32□□□□□ -1.72
TRAV35-201ENST00000390462 LINC01560Q8TB33 94 aa4.32□□□□□ -1.72
TRAV35-201ENST00000390462 SLC25A46Q96AG3 418 aa4.32□□□□□ -1.72
TRAV35-201ENST00000390462 TOMM6Q96B49 74 aa4.32□□□□□ -1.72
TRAV35-201ENST00000390462 VPS25Q9BRG1 176 aa4.32□□□□□ -1.72
TRAV35-201ENST00000390462 NKX6-2Q9C056 277 aaPredicted RBP4.32□□□□□ -1.72
TRAV35-201ENST00000390462 ANK1P16157 1881 aa4.32□□□□□ -1.72
TRAV35-201ENST00000390462 LRRK2Q5S007 2527 aa4.32□□□□□ -1.72
TRAV35-201ENST00000390462 AHCTF1Q8WYP5 2266 aa4.32□□□□□ -1.72
TRAV35-201ENST00000390462 UTP20O75691 2785 aaKnown RBP4.31□□□□□ -1.72
TRAV35-201ENST00000390462 PCSK5Q92824 1860 aa4.31□□□□□ -1.72
TRAV35-201ENST00000390462 TRAV36DV7A0A075B6V5 113 aa4.31□□□□□ -1.72
TRAV35-201ENST00000390462 TMEM189A5PLL7 270 aa4.31□□□□□ -1.72
TRAV35-201ENST00000390462 C9JCJ5 164 aa4.31□□□□□ -1.72
TRAV35-201ENST00000390462 CCR2P41597 374 aa4.31□□□□□ -1.72
TRAV35-201ENST00000390462 POLR2HP52434 150 aaKnown RBP4.31□□□□□ -1.72
TRAV35-201ENST00000390462 H1FOOQ8IZA3 346 aaPredicted RBP4.31□□□□□ -1.72
TRAV35-201ENST00000390462 OR11G2Q8NGC1 345 aa4.31□□□□□ -1.72
TRAV35-201ENST00000390462 ADAT3Q96EY9 351 aaPredicted RBP4.31□□□□□ -1.72
TRAV35-201ENST00000390462 C1QTNF6Q9BXI9 259 aa4.31□□□□□ -1.72
TRAV35-201ENST00000390462 IMUPQ9GZP8 106 aa4.31□□□□□ -1.72
TRAV35-201ENST00000390462 ZNF355PQ9NSJ1 428 aa4.31□□□□□ -1.72
TRAV35-201ENST00000390462 ZNF586Q9NXT0 402 aa4.31□□□□□ -1.72
TRAV35-201ENST00000390462 HSPB8Q9UJY1 196 aa4.31□□□□□ -1.72
TRAV35-201ENST00000390462 PHLDA3Q9Y5J5 127 aa4.31□□□□□ -1.72
TRAV35-201ENST00000390462 MYO18AQ92614 2054 aaKnown RBP4.31□□□□□ -1.72
TRAV35-201ENST00000390462 FBN2P35556 2912 aa4.31□□□□□ -1.72
TRAV35-201ENST00000390462 KNTC1P50748 2209 aa4.3□□□□□ -1.72
TRAV35-201ENST00000390462 IGLL5B9A064 214 aa4.3□□□□□ -1.72
TRAV35-201ENST00000390462 C5orf58C9J3I9 102 aa4.3□□□□□ -1.72
TRAV35-201ENST00000390462 TRAPPC2LH3BP13 241 aa4.3□□□□□ -1.72
TRAV35-201ENST00000390462 TMX2-CTNND1H3BSU7 103 aa4.3□□□□□ -1.72
TRAV35-201ENST00000390462 BCL2L11O43521 198 aa4.3□□□□□ -1.72
TRAV35-201ENST00000390462 SMIM24O75264 130 aa4.3□□□□□ -1.72
TRAV35-201ENST00000390462 C1QCP02747 245 aa4.3□□□□□ -1.72
TRAV35-201ENST00000390462 DBIP07108 87 aaKnown RBP4.3□□□□□ -1.72
TRAV35-201ENST00000390462 CGB3P0DN86 165 aa4.3□□□□□ -1.72
TRAV35-201ENST00000390462 CGB7P0DN87 165 aa4.3□□□□□ -1.72
TRAV35-201ENST00000390462 RPS10P46783 165 aaKnown RBP4.3□□□□□ -1.72
TRAV35-201ENST00000390462 UBE2SQ16763 222 aa4.3□□□□□ -1.72
TRAV35-201ENST00000390462 C14orf177Q52M58 125 aa4.3□□□□□ -1.72
TRAV35-201ENST00000390462 ZNF101Q8IZC7 436 aa4.3□□□□□ -1.72
TRAV35-201ENST00000390462 OR10D4PQ8NGN7 298 aa4.3□□□□□ -1.72
TRAV35-201ENST00000390462 RNASE6Q93091 150 aaKnown RBP4.3□□□□□ -1.72
TRAV35-201ENST00000390462 RBMXL1Q96E39 390 aaKnown RBP4.3□□□□□ -1.72
TRAV35-201ENST00000390462 C2orf50Q96LR7 162 aa4.3□□□□□ -1.72
TRAV35-201ENST00000390462 ZNF285Q96NJ3 590 aa4.3□□□□□ -1.72
TRAV35-201ENST00000390462 IP6K3Q96PC2 410 aa4.3□□□□□ -1.72
TRAV35-201ENST00000390462 PYGO2Q9BRQ0 406 aa4.3□□□□□ -1.72
TRAV35-201ENST00000390462 OR2D2Q9H210 308 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms