RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 HIGD1AQ9Y241 93 aa11.85□□□□□ -0.51
SNX2-201ENST00000379516 A0A0U1RQK1 487 aa11.84□□□□□ -0.51
SNX2-201ENST00000379516 HELTA6NFD8 242 aa11.84□□□□□ -0.51
SNX2-201ENST00000379516 B4DSR2 109 aa11.84□□□□□ -0.51
SNX2-201ENST00000379516 GNG7O60262 68 aa11.84□□□□□ -0.51
SNX2-201ENST00000379516 GALR1P47211 349 aa11.84□□□□□ -0.51
SNX2-201ENST00000379516 OCC1Q8TAD7 63 aa11.84□□□□□ -0.51
SNX2-201ENST00000379516 FAM210BQ96KR6 192 aa11.84□□□□□ -0.51
SNX2-201ENST00000379516 OR5B12Q96R08 314 aa11.84□□□□□ -0.51
SNX2-201ENST00000379516 TMUB1Q9BVT8 246 aa11.84□□□□□ -0.51
SNX2-201ENST00000379516 SAV1Q9H4B6 383 aaPredicted RBP11.84□□□□□ -0.51
SNX2-201ENST00000379516 SH2D7A6NKC9 451 aaPredicted RBP11.84□□□□□ -0.51
SNX2-201ENST00000379516 OR2J3O76001 311 aa11.84□□□□□ -0.51
SNX2-201ENST00000379516 NDUFB8O95169 186 aa11.84□□□□□ -0.51
SNX2-201ENST00000379516 SLC25A16P16260 332 aa11.84□□□□□ -0.51
SNX2-201ENST00000379516 COL8A1P27658 744 aa11.84□□□□□ -0.51
SNX2-201ENST00000379516 MFAP4P55083 255 aa11.84□□□□□ -0.51
SNX2-201ENST00000379516 LEMD1Q68G75 181 aa11.84□□□□□ -0.51
SNX2-201ENST00000379516 TMEM219Q86XT9 240 aa11.84□□□□□ -0.51
SNX2-201ENST00000379516 SGMS2Q8NHU3 365 aa11.84□□□□□ -0.51
SNX2-201ENST00000379516 ELOVL1Q9BW60 279 aa11.84□□□□□ -0.51
SNX2-201ENST00000379516 HIF1ANQ9NWT6 349 aa11.84□□□□□ -0.51
SNX2-201ENST00000379516 FAM208BQ5VWN6 2430 aa11.83□□□□□ -0.52
SNX2-201ENST00000379516 ATP6V0E1O15342 81 aa11.83□□□□□ -0.52
SNX2-201ENST00000379516 S100PP25815 95 aa11.83□□□□□ -0.52
SNX2-201ENST00000379516 ECSCRQ19T08 205 aa11.83□□□□□ -0.52
SNX2-201ENST00000379516 UNQ5815/PRO19632Q6UWF5 114 aa11.83□□□□□ -0.52
SNX2-201ENST00000379516 BLNKQ8WV28 456 aa11.83□□□□□ -0.52
SNX2-201ENST00000379516 BIN3Q9NQY0 253 aa11.83□□□□□ -0.52
SNX2-201ENST00000379516 TRAV30A0A087WSZ9 112 aa11.83□□□□□ -0.52
SNX2-201ENST00000379516 C9JCJ5 164 aa11.83□□□□□ -0.52
SNX2-201ENST00000379516 PFN1P07737 140 aaKnown RBP11.83□□□□□ -0.52
SNX2-201ENST00000379516 Q56UQ5 140 aa11.83□□□□□ -0.52
SNX2-201ENST00000379516 C1QL4Q86Z23 238 aa11.83□□□□□ -0.52
SNX2-201ENST00000379516 C5orf56Q8N8D9 126 aa11.83□□□□□ -0.52
SNX2-201ENST00000379516 SFRP2Q96HF1 295 aa11.83□□□□□ -0.52
SNX2-201ENST00000379516 SLC25A39Q9BZJ4 359 aaPredicted RBP11.83□□□□□ -0.52
SNX2-201ENST00000379516 C21orf62Q9NYP8 219 aa11.83□□□□□ -0.52
SNX2-201ENST00000379516 LRRK2Q5S007 2527 aa11.82□□□□□ -0.52
SNX2-201ENST00000379516 MDFIC2A0A1B0GVS7 189 aa11.82□□□□□ -0.52
SNX2-201ENST00000379516 TOMM40O96008 361 aa11.82□□□□□ -0.52
SNX2-201ENST00000379516 IGHV3-23P01764 117 aa11.82□□□□□ -0.52
SNX2-201ENST00000379516 CD99P14209 185 aa11.82□□□□□ -0.52
SNX2-201ENST00000379516 GNG4P50150 75 aa11.82□□□□□ -0.52
SNX2-201ENST00000379516 RANP62826 216 aaKnown RBP11.82□□□□□ -0.52
SNX2-201ENST00000379516 MEGF9Q9H1U4 602 aa11.82□□□□□ -0.52
SNX2-201ENST00000379516 MRPL27Q9P0M9 148 aaKnown RBP11.82□□□□□ -0.52
SNX2-201ENST00000379516 FBXL7Q9UJT9 491 aa11.82□□□□□ -0.52
SNX2-201ENST00000379516 TRBV24-1A0A075B6N3 115 aa11.81□□□□□ -0.52
SNX2-201ENST00000379516 LINC01548A6NM66 108 aa11.81□□□□□ -0.52
SNX2-201ENST00000379516 NBEAP1P0C6P0 100 aa11.81□□□□□ -0.52
SNX2-201ENST00000379516 CENPWQ5EE01 88 aa11.81□□□□□ -0.52
SNX2-201ENST00000379516 ZNF329Q86UD4 541 aa11.81□□□□□ -0.52
SNX2-201ENST00000379516 FAM110DQ8TAY7 271 aaPredicted RBP11.81□□□□□ -0.52
SNX2-201ENST00000379516 PIFOQ8TCI5 191 aa11.81□□□□□ -0.52
SNX2-201ENST00000379516 MOB4Q9Y3A3 225 aa11.81□□□□□ -0.52
SNX2-201ENST00000379516 SOX21Q9Y651 276 aaPredicted RBP11.81□□□□□ -0.52
SNX2-201ENST00000379516 CSMD2Q7Z408 3487 aa11.81□□□□□ -0.52
SNX2-201ENST00000379516 ABCA1O95477 2261 aa11.81□□□□□ -0.52
SNX2-201ENST00000379516 K7EN84 100 aa11.81□□□□□ -0.52
SNX2-201ENST00000379516 PPP1R2P9O14990 202 aa11.81□□□□□ -0.52
SNX2-201ENST00000379516 IL4P05112 153 aa11.81□□□□□ -0.52
SNX2-201ENST00000379516 S100A6P06703 90 aa11.81□□□□□ -0.52
SNX2-201ENST00000379516 GP9P14770 177 aa11.81□□□□□ -0.52
SNX2-201ENST00000379516 ZNF48Q96MX3 618 aaPredicted RBP11.81□□□□□ -0.52
SNX2-201ENST00000379516 LY96Q9Y6Y9 160 aa11.81□□□□□ -0.52
SNX2-201ENST00000379516 F8W735 103 aaPredicted RBP11.8□□□□□ -0.52
SNX2-201ENST00000379516 KRTAP10-9P60411 292 aa11.8□□□□□ -0.52
SNX2-201ENST00000379516 YPEL3P61236 119 aaPredicted RBP11.8□□□□□ -0.52
SNX2-201ENST00000379516 ZNF491Q8N8L2 437 aa11.8□□□□□ -0.52
SNX2-201ENST00000379516 RNF125Q96EQ8 232 aa11.8□□□□□ -0.52
SNX2-201ENST00000379516 CELSR2Q9HCU4 2923 aa11.8□□□□□ -0.52
SNX2-201ENST00000379516 ZFHX3Q15911 3703 aa11.8□□□□□ -0.52
SNX2-201ENST00000379516 FBN2P35556 2912 aa11.8□□□□□ -0.52
SNX2-201ENST00000379516 TRAV20A0A0B4J274 112 aa11.8□□□□□ -0.52
SNX2-201ENST00000379516 HIST1H1BP16401 226 aaKnown RBP11.8□□□□□ -0.52
SNX2-201ENST00000379516 SRP14P37108 136 aaKnown RBP11.8□□□□□ -0.52
SNX2-201ENST00000379516 SNRPEP62304 92 aaKnown RBP11.8□□□□□ -0.52
SNX2-201ENST00000379516 SMUG1Q53HV7 270 aa11.8□□□□□ -0.52
SNX2-201ENST00000379516 ZNF600Q6ZNG1 722 aa11.8□□□□□ -0.52
SNX2-201ENST00000379516 MAP1AP78559 2803 aaPredicted RBP11.79□□□□□ -0.52
SNX2-201ENST00000379516 A0A1W2PPQ1 181 aa11.79□□□□□ -0.52
SNX2-201ENST00000379516 PGPA6NDG6 321 aa11.79□□□□□ -0.52
SNX2-201ENST00000379516 OR2T8A6NH00 312 aa11.79□□□□□ -0.52
SNX2-201ENST00000379516 G3V318 75 aa11.79□□□□□ -0.52
SNX2-201ENST00000379516 H3BTX0 84 aa11.79□□□□□ -0.52
SNX2-201ENST00000379516 AVPP01185 164 aa11.79□□□□□ -0.52
SNX2-201ENST00000379516 TRGC2P03986 189 aa11.79□□□□□ -0.52
SNX2-201ENST00000379516 TEX38Q6PEX7 206 aa11.79□□□□□ -0.52
SNX2-201ENST00000379516 KCNIP4Q6PIL6 250 aa11.79□□□□□ -0.52
SNX2-201ENST00000379516 LINC01356Q8N9X3 169 aa11.79□□□□□ -0.52
SNX2-201ENST00000379516 OR10G8Q8NGN5 311 aa11.79□□□□□ -0.52
SNX2-201ENST00000379516 LINC00479Q96M42 142 aa11.79□□□□□ -0.52
SNX2-201ENST00000379516 WI2-2373I1.2A0A1W2PRP0 233 aa11.78□□□□□ -0.52
SNX2-201ENST00000379516 PEX7O00628 323 aa11.78□□□□□ -0.52
SNX2-201ENST00000379516 GATA3P23771 443 aa11.78□□□□□ -0.52
SNX2-201ENST00000379516 MYCNOSP40205 109 aa11.78□□□□□ -0.52
SNX2-201ENST00000379516 OR5I1Q13606 314 aa11.78□□□□□ -0.52
SNX2-201ENST00000379516 LY6EQ16553 131 aa11.78□□□□□ -0.52
SNX2-201ENST00000379516 PYGO2Q9BRQ0 406 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms