RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 Q56UQ5 140 aa10.41□□□□□ -0.74
USP11-204ENST00000377107 TEX36Q5VZQ5 186 aa10.41□□□□□ -0.74
USP11-204ENST00000377107 NUDT10Q8NFP7 164 aa10.41□□□□□ -0.74
USP11-204ENST00000377107 NUDT11Q96G61 164 aa10.41□□□□□ -0.74
USP11-204ENST00000377107 FBXL7Q9UJT9 491 aa10.41□□□□□ -0.74
USP11-204ENST00000377107 CX3CL1P78423 397 aa10.41□□□□□ -0.74
USP11-204ENST00000377107 SLAQ13239 276 aa10.41□□□□□ -0.74
USP11-204ENST00000377107 POU2AF1Q16633 256 aa10.41□□□□□ -0.74
USP11-204ENST00000377107 TMEM183BQ1AE95 376 aa10.41□□□□□ -0.74
USP11-204ENST00000377107 TMEM249Q2WGJ8 235 aa10.41□□□□□ -0.74
USP11-204ENST00000377107 WDR73Q6P4I2 378 aa10.41□□□□□ -0.74
USP11-204ENST00000377107 PRSS33Q8NF86 280 aa10.41□□□□□ -0.74
USP11-204ENST00000377107 CACNG8Q8WXS5 425 aa10.41□□□□□ -0.74
USP11-204ENST00000377107 C11orf52Q96A22 123 aa10.41□□□□□ -0.74
USP11-204ENST00000377107 RNF114Q9Y508 228 aa10.41□□□□□ -0.74
USP11-204ENST00000377107 HYPMO75409 117 aa10.41□□□□□ -0.74
USP11-204ENST00000377107 AMY1AP04745 511 aa10.41□□□□□ -0.74
USP11-204ENST00000377107 TFPI2P48307 235 aa10.41□□□□□ -0.74
USP11-204ENST00000377107 PAFAH1B2P68402 229 aa10.41□□□□□ -0.74
USP11-204ENST00000377107 PRNTQ86SH4 94 aa10.41□□□□□ -0.74
USP11-204ENST00000377107 TMEM167AQ8TBQ9 72 aa10.41□□□□□ -0.74
USP11-204ENST00000377107 CSMD1Q96PZ7 3565 aa10.41□□□□□ -0.74
USP11-204ENST00000377107 DSCAML1Q8TD84 2053 aa10.4□□□□□ -0.74
USP11-204ENST00000377107 CASP6P55212 293 aa10.4□□□□□ -0.74
USP11-204ENST00000377107 FAM167A-AS1Q96KT0 104 aa10.4□□□□□ -0.74
USP11-204ENST00000377107 TMEM133Q9H2Q1 129 aa10.4□□□□□ -0.74
USP11-204ENST00000377107 ASH1LQ9NR48 2969 aaKnown RBP10.4□□□□□ -0.74
USP11-204ENST00000377107 A0A1B0GWJ7 208 aa10.4□□□□□ -0.74
USP11-204ENST00000377107 TMEM177Q53S58 311 aa10.4□□□□□ -0.74
USP11-204ENST00000377107 EXOC3-AS1Q8N2X6 119 aa10.4□□□□□ -0.74
USP11-204ENST00000377107 NUP37Q8NFH4 326 aa10.4□□□□□ -0.74
USP11-204ENST00000377107 PERPQ96FX8 193 aa10.4□□□□□ -0.74
USP11-204ENST00000377107 OSTCQ9NRP0 149 aa10.4□□□□□ -0.74
USP11-204ENST00000377107 TMSB15BA0A087X1C1 80 aa10.4□□□□□ -0.75
USP11-204ENST00000377107 PPIAL4CA0A0B4J2A2 164 aa10.4□□□□□ -0.75
USP11-204ENST00000377107 MUC21A0A0G2JKD1 596 aa10.4□□□□□ -0.75
USP11-204ENST00000377107 MUC21A0A140T8X8 626 aa10.4□□□□□ -0.75
USP11-204ENST00000377107 BMPR1BO00238 502 aa10.4□□□□□ -0.75
USP11-204ENST00000377107 IGHV3-23P01764 117 aa10.4□□□□□ -0.75
USP11-204ENST00000377107 PPIAL4GP0DN37 164 aa10.4□□□□□ -0.75
USP11-204ENST00000377107 LINC00310P59036 64 aa10.4□□□□□ -0.75
USP11-204ENST00000377107 MUC21Q5SSG8 566 aa10.4□□□□□ -0.75
USP11-204ENST00000377107 TMEM136Q6ZRR5 245 aa10.4□□□□□ -0.75
USP11-204ENST00000377107 NEU1Q99519 415 aa10.4□□□□□ -0.75
USP11-204ENST00000377107 NCBP2LA6PVI3 153 aaKnown RBP10.39□□□□□ -0.75
USP11-204ENST00000377107 C22orf46C9J442 243 aa10.39□□□□□ -0.75
USP11-204ENST00000377107 M0R2Z0 102 aa10.39□□□□□ -0.75
USP11-204ENST00000377107 TBR1Q16650 682 aa10.39□□□□□ -0.75
USP11-204ENST00000377107 C1orf194Q5T5A4 169 aa10.39□□□□□ -0.75
USP11-204ENST00000377107 SH2D7A6NKC9 451 aaPredicted RBP10.39□□□□□ -0.75
USP11-204ENST00000377107 CGB1A6NKQ9 187 aa10.39□□□□□ -0.75
USP11-204ENST00000377107 PRRX1P54821 245 aa10.39□□□□□ -0.75
USP11-204ENST00000377107 RBPJQ06330 500 aa10.39□□□□□ -0.75
USP11-204ENST00000377107 GOLT1AQ6ZVE7 132 aa10.39□□□□□ -0.75
USP11-204ENST00000377107 ZNF329Q86UD4 541 aa10.39□□□□□ -0.75
USP11-204ENST00000377107 MUC15Q8N387 334 aa10.39□□□□□ -0.75
USP11-204ENST00000377107 GNB1LQ9BYB4 327 aa10.39□□□□□ -0.75
USP11-204ENST00000377107 MRPL32Q9BYC8 188 aaKnown RBP10.39□□□□□ -0.75
USP11-204ENST00000377107 MC5RP33032 325 aa10.38□□□□□ -0.75
USP11-204ENST00000377107 NUP35Q8NFH5 326 aa10.38□□□□□ -0.75
USP11-204ENST00000377107 IGHV2-26A0A0B4J1V2 119 aa10.38□□□□□ -0.75
USP11-204ENST00000377107 HLA-DQA1P01909 254 aa10.38□□□□□ -0.75
USP11-204ENST00000377107 TCF15Q12870 199 aa10.38□□□□□ -0.75
USP11-204ENST00000377107 SPATA45Q537H7 98 aa10.38□□□□□ -0.75
USP11-204ENST00000377107 SCNM1Q9BWG6 230 aa10.38□□□□□ -0.75
USP11-204ENST00000377107 A0A1W2PS18 150 aa10.38□□□□□ -0.75
USP11-204ENST00000377107 IGLV2-8P01709 118 aa10.38□□□□□ -0.75
USP11-204ENST00000377107 P01737 135 aa10.38□□□□□ -0.75
USP11-204ENST00000377107 GPX1P07203 203 aa10.38□□□□□ -0.75
USP11-204ENST00000377107 KLRD1Q13241 179 aa10.38□□□□□ -0.75
USP11-204ENST00000377107 MAJINQ3KP22 176 aa10.38□□□□□ -0.75
USP11-204ENST00000377107 RASL11BQ9BPW5 248 aa10.38□□□□□ -0.75
USP11-204ENST00000377107 MCRIP2Q9BUT9 160 aaKnown RBP10.38□□□□□ -0.75
USP11-204ENST00000377107 C19orf24Q9BVV8 132 aa10.38□□□□□ -0.75
USP11-204ENST00000377107 EPDR1Q9UM22 224 aa10.38□□□□□ -0.75
USP11-204ENST00000377107 COL8A1P27658 744 aa10.37□□□□□ -0.75
USP11-204ENST00000377107 SELENOTP62341 195 aa10.37□□□□□ -0.75
USP11-204ENST00000377107 Q6ZN92 141 aa10.37□□□□□ -0.75
USP11-204ENST00000377107 SPACA3Q8IXA5 215 aa10.37□□□□□ -0.75
USP11-204ENST00000377107 RNF2Q99496 336 aa10.37□□□□□ -0.75
USP11-204ENST00000377107 COL12A1Q99715 3063 aa10.37□□□□□ -0.75
USP11-204ENST00000377107 PSG1P11464 419 aa10.37□□□□□ -0.75
USP11-204ENST00000377107 PPP1R27Q86WC6 154 aa10.37□□□□□ -0.75
USP11-204ENST00000377107 CIARTQ8N365 385 aaPredicted RBP10.37□□□□□ -0.75
USP11-204ENST00000377107 Q8NA96 180 aa10.37□□□□□ -0.75
USP11-204ENST00000377107 ST6GALNAC6Q969X2 333 aa10.37□□□□□ -0.75
USP11-204ENST00000377107 CLEC5AQ9NY25 188 aa10.37□□□□□ -0.75
USP11-204ENST00000377107 IZUMO1RA6ND01 250 aa10.37□□□□□ -0.75
USP11-204ENST00000377107 CHEK1O14757 476 aa10.37□□□□□ -0.75
USP11-204ENST00000377107 MT-ND6P03923 174 aa10.37□□□□□ -0.75
USP11-204ENST00000377107 HIST1H1EP10412 219 aaKnown RBP10.37□□□□□ -0.75
USP11-204ENST00000377107 ZNF138P52744 262 aa10.37□□□□□ -0.75
USP11-204ENST00000377107 TCTAP57738 103 aa10.37□□□□□ -0.75
USP11-204ENST00000377107 ETFRF1Q6IPR1 90 aa10.37□□□□□ -0.75
USP11-204ENST00000377107 SRSF12Q8WXF0 261 aaKnown RBP10.37□□□□□ -0.75
USP11-204ENST00000377107 Q9H3A6 140 aa10.37□□□□□ -0.75
USP11-204ENST00000377107 HIGD1AQ9Y241 93 aa10.37□□□□□ -0.75
USP11-204ENST00000377107 IGKV1D-37A0A075B6S9 117 aa10.36□□□□□ -0.75
USP11-204ENST00000377107 CCL21O00585 134 aa10.36□□□□□ -0.75
USP11-204ENST00000377107 IGLV2-23P01705 113 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms