RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 ACY3Q96HD9 319 aa12.51□□□□□ -0.41
HLA-A-201ENST00000376802 BCL7BQ9BQE9 202 aa12.51□□□□□ -0.41
HLA-A-201ENST00000376802 PRR13Q9NZ81 148 aa12.51□□□□□ -0.41
HLA-A-201ENST00000376802 DNAH2Q9P225 4427 aa12.5□□□□□ -0.41
HLA-A-201ENST00000376802 PSG1P11464 419 aa12.5□□□□□ -0.41
HLA-A-201ENST00000376802 HLA-DRB4P13762 266 aa12.5□□□□□ -0.41
HLA-A-201ENST00000376802 DEFB1P60022 68 aa12.5□□□□□ -0.41
HLA-A-201ENST00000376802 GDF5OSQ5U4N7 250 aa12.5□□□□□ -0.41
HLA-A-201ENST00000376802 LINC00336Q6ZUF6 198 aa12.5□□□□□ -0.41
HLA-A-201ENST00000376802 CENPSQ8N2Z9 138 aa12.5□□□□□ -0.41
HLA-A-201ENST00000376802 SMIM4Q8WVI0 70 aa12.5□□□□□ -0.41
HLA-A-201ENST00000376802 HLA-DRB4X5D2U9 266 aa12.5□□□□□ -0.41
HLA-A-201ENST00000376802 ZNF705FA8MVS1 300 aaPredicted RBP12.49□□□□□ -0.41
HLA-A-201ENST00000376802 DISC1C4P0D8 188 aa12.49□□□□□ -0.41
HLA-A-201ENST00000376802 RGS5O15539 181 aa12.49□□□□□ -0.41
HLA-A-201ENST00000376802 ZNF705DP0CH99 300 aaPredicted RBP12.49□□□□□ -0.41
HLA-A-201ENST00000376802 ZNF705BP0CI00 300 aaPredicted RBP12.49□□□□□ -0.41
HLA-A-201ENST00000376802 SULT1A3P0DMM9 295 aa12.49□□□□□ -0.41
HLA-A-201ENST00000376802 SULT1A4P0DMN0 295 aa12.49□□□□□ -0.41
HLA-A-201ENST00000376802 NKX2-1P43699 371 aaPredicted RBP12.49□□□□□ -0.41
HLA-A-201ENST00000376802 TMBIM6P55061 237 aa12.49□□□□□ -0.41
HLA-A-201ENST00000376802 MRPS10P82664 201 aaKnown RBP12.49□□□□□ -0.41
HLA-A-201ENST00000376802 POM121L12Q8N7R1 296 aa12.49□□□□□ -0.41
HLA-A-201ENST00000376802 OR51G1Q8NGK1 321 aa12.49□□□□□ -0.41
HLA-A-201ENST00000376802 NEU1Q99519 415 aa12.49□□□□□ -0.41
HLA-A-201ENST00000376802 GSTZ1O43708 216 aaPredicted RBP12.48□□□□□ -0.41
HLA-A-201ENST00000376802 AKAIN1P0CW23 69 aa12.48□□□□□ -0.41
HLA-A-201ENST00000376802 NOXA1Q86UR1 476 aa12.48□□□□□ -0.41
HLA-A-201ENST00000376802 OR51S1Q8NGJ8 323 aa12.48□□□□□ -0.41
HLA-A-201ENST00000376802 RAB2BQ8WUD1 216 aa12.48□□□□□ -0.41
HLA-A-201ENST00000376802 IL22RA2Q969J5 263 aa12.48□□□□□ -0.41
HLA-A-201ENST00000376802 RNF125Q96EQ8 232 aa12.48□□□□□ -0.41
HLA-A-201ENST00000376802 WDR12Q9GZL7 423 aaKnown RBP12.48□□□□□ -0.41
HLA-A-201ENST00000376802 HSPB7Q9UBY9 170 aa12.48□□□□□ -0.41
HLA-A-201ENST00000376802 U3KQ87 197 aa12.48□□□□□ -0.41
HLA-A-201ENST00000376802 DNAH17Q9UFH2 4485 aa12.47□□□□□ -0.41
HLA-A-201ENST00000376802 IGKV1D-37A0A075B6S9 117 aa12.47□□□□□ -0.41
HLA-A-201ENST00000376802 CTDSPLO15194 276 aa12.47□□□□□ -0.41
HLA-A-201ENST00000376802 IFNA10P01566 189 aa12.47□□□□□ -0.41
HLA-A-201ENST00000376802 KLF9Q13886 244 aaPredicted RBP12.47□□□□□ -0.41
HLA-A-201ENST00000376802 SPCS2Q15005 226 aa12.47□□□□□ -0.41
HLA-A-201ENST00000376802 CLVS1Q8IUQ0 354 aaPredicted RBP12.47□□□□□ -0.41
HLA-A-201ENST00000376802 PRRT1Q99946 306 aa12.47□□□□□ -0.41
HLA-A-201ENST00000376802 NDUFAF3Q9BU61 184 aa12.47□□□□□ -0.41
HLA-A-201ENST00000376802 KRTAP3-3Q9BYR6 98 aa12.47□□□□□ -0.41
HLA-A-201ENST00000376802 KRTAP3-2Q9BYR7 98 aa12.47□□□□□ -0.41
HLA-A-201ENST00000376802 RBKSQ9H477 322 aa12.47□□□□□ -0.41
HLA-A-201ENST00000376802 CACFD1Q9UGQ2 172 aa12.47□□□□□ -0.41
HLA-A-201ENST00000376802 RTL8CO15255 209 aa12.46□□□□□ -0.41
HLA-A-201ENST00000376802 NOL3O60936 208 aaKnown RBP12.46□□□□□ -0.41
HLA-A-201ENST00000376802 P0DMU3 169 aa12.46□□□□□ -0.41
HLA-A-201ENST00000376802 FAM231AP0DMU4 169 aa12.46□□□□□ -0.41
HLA-A-201ENST00000376802 FAM231CP0DMU5 169 aa12.46□□□□□ -0.41
HLA-A-201ENST00000376802 SUPT4H1P63272 117 aaKnown RBP12.46□□□□□ -0.41
HLA-A-201ENST00000376802 ZNF90Q03938 601 aa12.46□□□□□ -0.41
HLA-A-201ENST00000376802 GAMTQ14353 236 aa12.46□□□□□ -0.41
HLA-A-201ENST00000376802 LYZL2Q7Z4W2 148 aa12.46□□□□□ -0.41
HLA-A-201ENST00000376802 ZNF709Q8N972 641 aa12.46□□□□□ -0.41
HLA-A-201ENST00000376802 RSL24D1Q9UHA3 163 aaKnown RBP12.46□□□□□ -0.41
HLA-A-201ENST00000376802 ANKRD20A5PA0PJZ0 165 aa12.45□□□□□ -0.42
HLA-A-201ENST00000376802 SOCS3O14543 225 aa12.45□□□□□ -0.42
HLA-A-201ENST00000376802 IGKV3-20P01619 116 aa12.45□□□□□ -0.42
HLA-A-201ENST00000376802 FXYD7P58549 80 aa12.45□□□□□ -0.42
HLA-A-201ENST00000376802 SMCO1Q147U7 214 aa12.45□□□□□ -0.42
HLA-A-201ENST00000376802 GSG1LQ6UXU4 331 aa12.45□□□□□ -0.42
HLA-A-201ENST00000376802 LGI3Q8N145 548 aa12.45□□□□□ -0.42
HLA-A-201ENST00000376802 DTD1Q8TEA8 209 aa12.45□□□□□ -0.42
HLA-A-201ENST00000376802 CLUHP3Q96NS8 147 aa12.45□□□□□ -0.42
HLA-A-201ENST00000376802 PBDC1Q9BVG4 233 aa12.45□□□□□ -0.42
HLA-A-201ENST00000376802 SAV1Q9H4B6 383 aaPredicted RBP12.45□□□□□ -0.42
HLA-A-201ENST00000376802 KCNIP3Q9Y2W7 256 aa12.45□□□□□ -0.42
HLA-A-201ENST00000376802 MUC4Q99102 2169 aa12.44□□□□□ -0.42
HLA-A-201ENST00000376802 A0A0B4J2A0 478 aa12.44□□□□□ -0.42
HLA-A-201ENST00000376802 SMIM9A6NGZ8 99 aa12.44□□□□□ -0.42
HLA-A-201ENST00000376802 SPART-AS1P0CW21 52 aa12.44□□□□□ -0.42
HLA-A-201ENST00000376802 CCR6P51684 374 aa12.44□□□□□ -0.42
HLA-A-201ENST00000376802 EMP1P54849 157 aa12.44□□□□□ -0.42
HLA-A-201ENST00000376802 IL18Q14116 193 aa12.44□□□□□ -0.42
HLA-A-201ENST00000376802 OR8G2PQ6IF36 304 aa12.44□□□□□ -0.42
HLA-A-201ENST00000376802 LINC00052Q96N35 136 aa12.44□□□□□ -0.42
HLA-A-201ENST00000376802 SHPKQ9UHJ6 478 aa12.44□□□□□ -0.42
HLA-A-201ENST00000376802 PKD1P98161 4303 aa12.43□□□□□ -0.42
HLA-A-201ENST00000376802 CCDC160A6NGH7 325 aa12.43□□□□□ -0.42
HLA-A-201ENST00000376802 M0R2N4 97 aa12.43□□□□□ -0.42
HLA-A-201ENST00000376802 GPX4P36969 197 aaPredicted RBP12.43□□□□□ -0.42
HLA-A-201ENST00000376802 ZNF79Q15937 498 aa12.43□□□□□ -0.42
HLA-A-201ENST00000376802 C1orf194Q5T5A4 169 aa12.43□□□□□ -0.42
HLA-A-201ENST00000376802 FOXI2Q6ZQN5 318 aa12.43□□□□□ -0.42
HLA-A-201ENST00000376802 DIRAS2Q96HU8 199 aa12.43□□□□□ -0.42
HLA-A-201ENST00000376802 PLA2G2EQ9NZK7 142 aa12.43□□□□□ -0.42
HLA-A-201ENST00000376802 DKK2Q9UBU2 259 aa12.43□□□□□ -0.42
HLA-A-201ENST00000376802 TMEM189A5PLL7 270 aa12.42□□□□□ -0.42
HLA-A-201ENST00000376802 PRSS29PA6NIE9 313 aa12.42□□□□□ -0.42
HLA-A-201ENST00000376802 ZFP92A6NM28 416 aa12.42□□□□□ -0.42
HLA-A-201ENST00000376802 H3BMQ9 156 aa12.42□□□□□ -0.42
HLA-A-201ENST00000376802 AKR1C4P17516 323 aa12.42□□□□□ -0.42
HLA-A-201ENST00000376802 PSMB3P49720 205 aa12.42□□□□□ -0.42
HLA-A-201ENST00000376802 SLC35B3Q9H1N7 401 aa12.42□□□□□ -0.42
HLA-A-201ENST00000376802 RFNGQ9Y644 331 aa12.42□□□□□ -0.42
HLA-A-201ENST00000376802 NACAE9PAV3 2078 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms