RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 IGKV1-17P01599 117 aa17.16■□□□□ 0.34
RNF39-202ENST00000376751 GNG5P63218 68 aa17.16■□□□□ 0.34
RNF39-202ENST00000376751 NDPQ00604 133 aa17.16■□□□□ 0.34
RNF39-202ENST00000376751 KLF17Q5JT82 389 aaPredicted RBP17.16■□□□□ 0.34
RNF39-202ENST00000376751 ASPHD1Q5U4P2 390 aa17.16■□□□□ 0.34
RNF39-202ENST00000376751 TMEM183AQ8IXX5 376 aa17.16■□□□□ 0.34
RNF39-202ENST00000376751 NHLRC2Q8NBF2 726 aa17.16■□□□□ 0.34
RNF39-202ENST00000376751 BLNKQ8WV28 456 aa17.16■□□□□ 0.34
RNF39-202ENST00000376751 BPESC1Q9GZL8 116 aa17.16■□□□□ 0.34
RNF39-202ENST00000376751 FABP4P15090 132 aa17.15■□□□□ 0.34
RNF39-202ENST00000376751 LYZP61626 148 aa17.15■□□□□ 0.34
RNF39-202ENST00000376751 LMO4P61968 165 aa17.15■□□□□ 0.34
RNF39-202ENST00000376751 COA6Q5JTJ3 125 aaKnown RBP17.15■□□□□ 0.34
RNF39-202ENST00000376751 BTF3L4Q96K17 158 aa17.15■□□□□ 0.34
RNF39-202ENST00000376751 CDC42EP3Q9UKI2 254 aa17.15■□□□□ 0.34
RNF39-202ENST00000376751 TRAV34A0A0B4J273 112 aa17.15■□□□□ 0.34
RNF39-202ENST00000376751 RANP62826 216 aaKnown RBP17.15■□□□□ 0.34
RNF39-202ENST00000376751 MINOS1Q5TGZ0 78 aa17.15■□□□□ 0.34
RNF39-202ENST00000376751 CCDC144NLQ6NUI1 221 aa17.15■□□□□ 0.34
RNF39-202ENST00000376751 HIST1H2BLQ99880 126 aa17.15■□□□□ 0.34
RNF39-202ENST00000376751 TRAPPC1Q9Y5R8 145 aa17.15■□□□□ 0.34
RNF39-202ENST00000376751 MINOS1-NBL1R4GNA1 71 aa17.15■□□□□ 0.34
RNF39-202ENST00000376751 RPEL1Q2QD12 228 aa17.14■□□□□ 0.33
RNF39-202ENST00000376751 CDPF1Q6NVV7 123 aa17.14■□□□□ 0.33
RNF39-202ENST00000376751 STXBP6Q8NFX7 210 aa17.14■□□□□ 0.33
RNF39-202ENST00000376751 AJUBAQ96IF1 538 aa17.14■□□□□ 0.33
RNF39-202ENST00000376751 TBX15Q96SF7 602 aa17.14■□□□□ 0.33
RNF39-202ENST00000376751 OSTCQ9NRP0 149 aa17.14■□□□□ 0.33
RNF39-202ENST00000376751 HIGD1AQ9Y241 93 aa17.14■□□□□ 0.33
RNF39-202ENST00000376751 OOSP1A8MZH6 123 aa17.13■□□□□ 0.33
RNF39-202ENST00000376751 FRMD6-AS1P0C7T7 363 aa17.13■□□□□ 0.33
RNF39-202ENST00000376751 MGST1P10620 155 aaKnown RBP17.13■□□□□ 0.33
RNF39-202ENST00000376751 TAS2R60P59551 318 aa17.13■□□□□ 0.33
RNF39-202ENST00000376751 CX3CL1P78423 397 aa17.13■□□□□ 0.33
RNF39-202ENST00000376751 ABCA2Q9BZC7 2435 aa17.13■□□□□ 0.33
RNF39-202ENST00000376751 H3BTX0 84 aa17.13■□□□□ 0.33
RNF39-202ENST00000376751 OVOL3O00110 214 aa17.13■□□□□ 0.33
RNF39-202ENST00000376751 CNN1P51911 297 aaKnown RBP17.13■□□□□ 0.33
RNF39-202ENST00000376751 EBI3Q14213 229 aa17.13■□□□□ 0.33
RNF39-202ENST00000376751 RASL11BQ9BPW5 248 aa17.13■□□□□ 0.33
RNF39-202ENST00000376751 TRAV9-1A0A075B6T8 112 aa17.12■□□□□ 0.33
RNF39-202ENST00000376751 NCBP2LA6PVI3 153 aaKnown RBP17.12■□□□□ 0.33
RNF39-202ENST00000376751 ISLRO14498 428 aa17.12■□□□□ 0.33
RNF39-202ENST00000376751 TOX4O94842 621 aa17.12■□□□□ 0.33
RNF39-202ENST00000376751 ARPC1AQ92747 370 aa17.12■□□□□ 0.33
RNF39-202ENST00000376751 RBM14Q96PK6 669 aaKnown RBP17.12■□□□□ 0.33
RNF39-202ENST00000376751 S4R3C0 116 aa17.12■□□□□ 0.33
RNF39-202ENST00000376751 NBEAP1P0C6P0 100 aa17.11■□□□□ 0.33
RNF39-202ENST00000376751 PDLIM4P50479 330 aa17.11■□□□□ 0.33
RNF39-202ENST00000376751 YPEL3P61236 119 aaPredicted RBP17.11■□□□□ 0.33
RNF39-202ENST00000376751 GSN-AS1Q9NRJ2 163 aa17.11■□□□□ 0.33
RNF39-202ENST00000376751 IGHV4-39P01824 125 aa17.11■□□□□ 0.33
RNF39-202ENST00000376751 CBLN1P23435 193 aa17.11■□□□□ 0.33
RNF39-202ENST00000376751 FAM120AOSQ5T036 256 aa17.11■□□□□ 0.33
RNF39-202ENST00000376751 ZNF562Q6V9R5 426 aa17.11■□□□□ 0.33
RNF39-202ENST00000376751 OR8I2Q8N0Y5 310 aa17.11■□□□□ 0.33
RNF39-202ENST00000376751 FANCD2OSQ96PS1 177 aa17.11■□□□□ 0.33
RNF39-202ENST00000376751 SLC25A39Q9BZJ4 359 aaPredicted RBP17.11■□□□□ 0.33
RNF39-202ENST00000376751 CSMD1Q96PZ7 3565 aa17.11■□□□□ 0.33
RNF39-202ENST00000376751 AMBPP02760 352 aa17.1■□□□□ 0.33
RNF39-202ENST00000376751 SLC25A5P05141 298 aaKnown RBP17.1■□□□□ 0.33
RNF39-202ENST00000376751 HIST1H1BP16401 226 aaKnown RBP17.1■□□□□ 0.33
RNF39-202ENST00000376751 ADMP35318 185 aa17.1■□□□□ 0.33
RNF39-202ENST00000376751 S100A12P80511 92 aa17.1■□□□□ 0.33
RNF39-202ENST00000376751 PACRGQ96M98 296 aaPredicted RBP17.1■□□□□ 0.33
RNF39-202ENST00000376751 EPDR1Q9UM22 224 aa17.1■□□□□ 0.33
RNF39-202ENST00000376751 FLNCQ14315 2725 aa17.1■□□□□ 0.33
RNF39-202ENST00000376751 ACACBO00763 2458 aa17.1■□□□□ 0.33
RNF39-202ENST00000376751 IGLV11-55A0A075B6I3 123 aa17.09■□□□□ 0.33
RNF39-202ENST00000376751 PGPA6NDG6 321 aa17.09■□□□□ 0.33
RNF39-202ENST00000376751 NPIPB5A8MRT5 1133 aa17.09■□□□□ 0.33
RNF39-202ENST00000376751 RD3LP0DJH9 198 aa17.09■□□□□ 0.33
RNF39-202ENST00000376751 TMEM11P17152 192 aa17.09■□□□□ 0.33
RNF39-202ENST00000376751 ZNF600Q6ZNG1 722 aa17.09■□□□□ 0.33
RNF39-202ENST00000376751 MRPL27Q9P0M9 148 aaKnown RBP17.09■□□□□ 0.33
RNF39-202ENST00000376751 IBA57Q5T440 356 aaKnown RBP17.09■□□□□ 0.33
RNF39-202ENST00000376751 OR1L6Q8NGR2 347 aa17.09■□□□□ 0.33
RNF39-202ENST00000376751 A0A1B0GUS0 222 aa17.08■□□□□ 0.33
RNF39-202ENST00000376751 FABP1P07148 127 aa17.08■□□□□ 0.33
RNF39-202ENST00000376751 UBE2E1P51965 193 aa17.08■□□□□ 0.33
RNF39-202ENST00000376751 TCL1AP56279 114 aa17.08■□□□□ 0.33
RNF39-202ENST00000376751 BAGE2Q86Y30 109 aa17.08■□□□□ 0.33
RNF39-202ENST00000376751 RPH3ALQ9UNE2 315 aa17.08■□□□□ 0.33
RNF39-202ENST00000376751 TBL2Q9Y4P3 447 aaKnown RBP17.08■□□□□ 0.33
RNF39-202ENST00000376751 SGK494Q96LW2 274 aa17.08■□□□□ 0.32
RNF39-202ENST00000376751 Q9H3A6 140 aa17.08■□□□□ 0.32
RNF39-202ENST00000376751 EGR2P11161 476 aaPredicted RBP17.07■□□□□ 0.32
RNF39-202ENST00000376751 TMEM183BQ1AE95 376 aa17.07■□□□□ 0.32
RNF39-202ENST00000376751 TTC9CQ8N5M4 171 aa17.07■□□□□ 0.32
RNF39-202ENST00000376751 FAM168AQ92567 244 aa17.07■□□□□ 0.32
RNF39-202ENST00000376751 LPAR2Q9HBW0 351 aa17.07■□□□□ 0.32
RNF39-202ENST00000376751 ZNF586Q9NXT0 402 aa17.07■□□□□ 0.32
RNF39-202ENST00000376751 USP9XQ93008 2570 aaPredicted RBP17.07■□□□□ 0.32
RNF39-202ENST00000376751 COL12A1Q99715 3063 aa17.06■□□□□ 0.32
RNF39-202ENST00000376751 F8W735 103 aaPredicted RBP17.06■□□□□ 0.32
RNF39-202ENST00000376751 CA1P00915 261 aaPredicted RBP17.06■□□□□ 0.32
RNF39-202ENST00000376751 SAA4P35542 130 aa17.06■□□□□ 0.32
RNF39-202ENST00000376751 IER3P46695 156 aa17.06■□□□□ 0.32
RNF39-202ENST00000376751 Q8N9W7 124 aa17.06■□□□□ 0.32
RNF39-202ENST00000376751 C7orf69Q9H7B7 122 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms