RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 PRSS22Q9GZN4 317 aa16.65■□□□□ 0.26
TMEFF1-201ENST00000374879 PLSCR4Q9NRQ2 329 aa16.65■□□□□ 0.26
TMEFF1-201ENST00000374879 AP5S1Q9NUS5 200 aa16.65■□□□□ 0.26
TMEFF1-201ENST00000374879 TIMM23BQ5SRD1 257 aa16.64■□□□□ 0.25
TMEFF1-201ENST00000374879 HES3Q5TGS1 186 aa16.64■□□□□ 0.25
TMEFF1-201ENST00000374879 TMEM105Q8N8V8 129 aa16.64■□□□□ 0.25
TMEFF1-201ENST00000374879 OR8A1Q8NGG7 326 aa16.64■□□□□ 0.25
TMEFF1-201ENST00000374879 OR9G4Q8NGQ1 327 aa16.64■□□□□ 0.25
TMEFF1-201ENST00000374879 MRPL32Q9BYC8 188 aaKnown RBP16.64■□□□□ 0.25
TMEFF1-201ENST00000374879 SOX21Q9Y651 276 aaPredicted RBP16.64■□□□□ 0.25
TMEFF1-201ENST00000374879 EDDM3AQ14507 147 aa16.64■□□□□ 0.25
TMEFF1-201ENST00000374879 RBPMS2Q6ZRY4 209 aaKnown RBP16.64■□□□□ 0.25
TMEFF1-201ENST00000374879 STXBP6Q8NFX7 210 aa16.64■□□□□ 0.25
TMEFF1-201ENST00000374879 FAM173AQ9BQD7 235 aa16.64■□□□□ 0.25
TMEFF1-201ENST00000374879 MOSP00540 346 aa16.63■□□□□ 0.25
TMEFF1-201ENST00000374879 P01737 135 aa16.63■□□□□ 0.25
TMEFF1-201ENST00000374879 DHRS13Q6UX07 377 aa16.63■□□□□ 0.25
TMEFF1-201ENST00000374879 OR2Z1Q8NG97 314 aa16.63■□□□□ 0.25
TMEFF1-201ENST00000374879 OR4X2Q8NGF9 303 aa16.63■□□□□ 0.25
TMEFF1-201ENST00000374879 C18orf15Q96N68 181 aa16.63■□□□□ 0.25
TMEFF1-201ENST00000374879 DYSFO75923 2080 aa16.63■□□□□ 0.25
TMEFF1-201ENST00000374879 TMEM177Q53S58 311 aa16.63■□□□□ 0.25
TMEFF1-201ENST00000374879 PCP2Q8IVA1 136 aa16.63■□□□□ 0.25
TMEFF1-201ENST00000374879 BLNKQ8WV28 456 aa16.63■□□□□ 0.25
TMEFF1-201ENST00000374879 TNCP24821 2201 aa16.62■□□□□ 0.25
TMEFF1-201ENST00000374879 SMIM13P0DJ93 91 aa16.62■□□□□ 0.25
TMEFF1-201ENST00000374879 ACP1P24666 158 aa16.62■□□□□ 0.25
TMEFF1-201ENST00000374879 SPATA25Q9BR10 227 aa16.62■□□□□ 0.25
TMEFF1-201ENST00000374879 F11RQ9Y624 299 aaKnown RBP16.62■□□□□ 0.25
TMEFF1-201ENST00000374879 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.62■□□□□ 0.25
TMEFF1-201ENST00000374879 FAM106CPP0CH98 169 aa16.62■□□□□ 0.25
TMEFF1-201ENST00000374879 MAGEA5P43359 124 aa16.62■□□□□ 0.25
TMEFF1-201ENST00000374879 WFDC2Q14508 124 aa16.62■□□□□ 0.25
TMEFF1-201ENST00000374879 FAM106AQ4KMX7 169 aa16.62■□□□□ 0.25
TMEFF1-201ENST00000374879 MLST8Q9BVC4 326 aa16.62■□□□□ 0.25
TMEFF1-201ENST00000374879 B4GALT7Q9UBV7 327 aa16.62■□□□□ 0.25
TMEFF1-201ENST00000374879 AHCTF1Q8WYP5 2266 aa16.62■□□□□ 0.25
TMEFF1-201ENST00000374879 SIVA1O15304 175 aa16.61■□□□□ 0.25
TMEFF1-201ENST00000374879 ABHD17BQ5VST6 288 aa16.61■□□□□ 0.25
TMEFF1-201ENST00000374879 FAM90A1Q86YD7 464 aa16.61■□□□□ 0.25
TMEFF1-201ENST00000374879 ZADH2Q8N4Q0 377 aa16.61■□□□□ 0.25
TMEFF1-201ENST00000374879 DDB2Q92466 427 aa16.61■□□□□ 0.25
TMEFF1-201ENST00000374879 GPR82Q96P67 336 aa16.61■□□□□ 0.25
TMEFF1-201ENST00000374879 VGLL1Q99990 258 aa16.61■□□□□ 0.25
TMEFF1-201ENST00000374879 SPANXB1Q9NS25 103 aaPredicted RBP16.61■□□□□ 0.25
TMEFF1-201ENST00000374879 KNTC1P50748 2209 aa16.61■□□□□ 0.25
TMEFF1-201ENST00000374879 TEX50A0A1B0GTY4 177 aa16.61■□□□□ 0.25
TMEFF1-201ENST00000374879 MC5RP33032 325 aa16.61■□□□□ 0.25
TMEFF1-201ENST00000374879 CSN1S1P47710 185 aa16.61■□□□□ 0.25
TMEFF1-201ENST00000374879 UTF1Q5T230 341 aa16.61■□□□□ 0.25
TMEFF1-201ENST00000374879 C11orf53Q8IXP5 236 aa16.61■□□□□ 0.25
TMEFF1-201ENST00000374879 EPDR1Q9UM22 224 aa16.61■□□□□ 0.25
TMEFF1-201ENST00000374879 SLC25A5P05141 298 aaKnown RBP16.6■□□□□ 0.25
TMEFF1-201ENST00000374879 FOXI2Q6ZQN5 318 aa16.6■□□□□ 0.25
TMEFF1-201ENST00000374879 MDP1Q86V88 176 aa16.6■□□□□ 0.25
TMEFF1-201ENST00000374879 ITLN1Q8WWA0 313 aa16.6■□□□□ 0.25
TMEFF1-201ENST00000374879 FXYD5Q96DB9 178 aa16.6■□□□□ 0.25
TMEFF1-201ENST00000374879 ZNF48Q96MX3 618 aaPredicted RBP16.6■□□□□ 0.25
TMEFF1-201ENST00000374879 C19orf71A6NCJ1 209 aa16.6■□□□□ 0.25
TMEFF1-201ENST00000374879 SRRM4A7MD48 611 aaKnown RBP16.6■□□□□ 0.25
TMEFF1-201ENST00000374879 DNAJC13O75165 2243 aa16.6■□□□□ 0.25
TMEFF1-201ENST00000374879 IFI27L2Q9H2X8 130 aa16.6■□□□□ 0.25
TMEFF1-201ENST00000374879 NKX2-8O15522 239 aa16.59■□□□□ 0.25
TMEFF1-201ENST00000374879 NMUP48645 174 aa16.59■□□□□ 0.25
TMEFF1-201ENST00000374879 SSBP2P81877 361 aaPredicted RBP16.59■□□□□ 0.25
TMEFF1-201ENST00000374879 CT83Q5H943 113 aa16.59■□□□□ 0.25
TMEFF1-201ENST00000374879 COL25A1Q9BXS0 654 aaPredicted RBP16.59■□□□□ 0.25
TMEFF1-201ENST00000374879 TTTY12Q9BZ98 90 aa16.59■□□□□ 0.25
TMEFF1-201ENST00000374879 ZDBF2Q9HCK1 2354 aa16.59■□□□□ 0.25
TMEFF1-201ENST00000374879 K7EQM0 130 aa16.59■□□□□ 0.25
TMEFF1-201ENST00000374879 MYCNOSP40205 109 aa16.59■□□□□ 0.25
TMEFF1-201ENST00000374879 LOXL1Q08397 574 aaPredicted RBP16.59■□□□□ 0.25
TMEFF1-201ENST00000374879 PRSS3P2Q8NHM4 247 aa16.59■□□□□ 0.25
TMEFF1-201ENST00000374879 SPAG8Q99932 426 aaPredicted RBP16.59■□□□□ 0.25
TMEFF1-201ENST00000374879 A0A096LNJ9 63 aa16.58■□□□□ 0.25
TMEFF1-201ENST00000374879 K7ERJ3 54 aa16.58■□□□□ 0.25
TMEFF1-201ENST00000374879 COX7A2P2O60397 106 aa16.58■□□□□ 0.25
TMEFF1-201ENST00000374879 PLAUP00749 431 aa16.58■□□□□ 0.25
TMEFF1-201ENST00000374879 C3AR1Q16581 482 aa16.58■□□□□ 0.25
TMEFF1-201ENST00000374879 PATE2Q6UY27 113 aa16.58■□□□□ 0.25
TMEFF1-201ENST00000374879 LEAP2Q969E1 77 aa16.58■□□□□ 0.25
TMEFF1-201ENST00000374879 FXYD2P54710 66 aa16.58■□□□□ 0.24
TMEFF1-201ENST00000374879 CACNG7P62955 275 aa16.58■□□□□ 0.24
TMEFF1-201ENST00000374879 TCTEX1D4Q5JR98 221 aa16.58■□□□□ 0.24
TMEFF1-201ENST00000374879 SH2D6Q7Z4S9 175 aa16.58■□□□□ 0.24
TMEFF1-201ENST00000374879 C1orf210Q8IVY1 113 aa16.58■□□□□ 0.24
TMEFF1-201ENST00000374879 DAZAP1Q96EP5 407 aaKnown RBP16.58■□□□□ 0.24
TMEFF1-201ENST00000374879 OBP2BQ9NPH6 170 aa16.58■□□□□ 0.24
TMEFF1-201ENST00000374879 COL27A1Q8IZC6 1860 aaPredicted RBP16.58■□□□□ 0.24
TMEFF1-201ENST00000374879 PRRC2CQ9Y520 2896 aaKnown RBP16.57■□□□□ 0.24
TMEFF1-201ENST00000374879 PGPA6NDG6 321 aa16.57■□□□□ 0.24
TMEFF1-201ENST00000374879 GCSHP23434 173 aa16.57■□□□□ 0.24
TMEFF1-201ENST00000374879 KIR2DS2P43631 304 aa16.57■□□□□ 0.24
TMEFF1-201ENST00000374879 PRR7Q8TB68 274 aa16.57■□□□□ 0.24
TMEFF1-201ENST00000374879 FAM222BQ8WU58 562 aa16.57■□□□□ 0.24
TMEFF1-201ENST00000374879 GFRA4Q9GZZ7 299 aa16.57■□□□□ 0.24
TMEFF1-201ENST00000374879 KLF12Q9Y4X4 402 aa16.57■□□□□ 0.24
TMEFF1-201ENST00000374879 HAX1O00165 279 aa16.57■□□□□ 0.24
TMEFF1-201ENST00000374879 C10orf113Q5VZT2 155 aa16.57■□□□□ 0.24
TMEFF1-201ENST00000374879 J3QR89 54 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms