RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 CCL4P13236 92 aa9.33□□□□□ -0.92
CDC42BPA-205ENST00000366769 ZP4Q12836 540 aa9.33□□□□□ -0.92
CDC42BPA-205ENST00000366769 F2Z2F3 143 aa9.33□□□□□ -0.92
CDC42BPA-205ENST00000366769 NKX2-2O95096 273 aa9.33□□□□□ -0.92
CDC42BPA-205ENST00000366769 ZNF703Q9H7S9 590 aaPredicted RBP9.33□□□□□ -0.92
CDC42BPA-205ENST00000366769 INS-IGF2F8WCM5 200 aa9.33□□□□□ -0.92
CDC42BPA-205ENST00000366769 INSP01308 110 aa9.33□□□□□ -0.92
CDC42BPA-205ENST00000366769 GAS1P54826 345 aa9.33□□□□□ -0.92
CDC42BPA-205ENST00000366769 ERVK11-1P61568 191 aa9.33□□□□□ -0.92
CDC42BPA-205ENST00000366769 C9orf50Q5SZB4 431 aa9.33□□□□□ -0.92
CDC42BPA-205ENST00000366769 ZNF826PQ6ZT77 177 aa9.33□□□□□ -0.92
CDC42BPA-205ENST00000366769 NPC2P61916 151 aa9.33□□□□□ -0.92
CDC42BPA-205ENST00000366769 ABHD17AQ96GS6 310 aa9.33□□□□□ -0.92
CDC42BPA-205ENST00000366769 RASL10BQ96S79 203 aa9.33□□□□□ -0.92
CDC42BPA-205ENST00000366769 CHAC1Q9BUX1 264 aa9.33□□□□□ -0.92
CDC42BPA-205ENST00000366769 MOSP00540 346 aa9.33□□□□□ -0.92
CDC42BPA-205ENST00000366769 Q96M66 194 aa9.33□□□□□ -0.92
CDC42BPA-205ENST00000366769 FCN3O75636 299 aa9.33□□□□□ -0.92
CDC42BPA-205ENST00000366769 IGLC2P0DOY2 106 aa9.33□□□□□ -0.92
CDC42BPA-205ENST00000366769 IGLC3P0DOY3 106 aa9.33□□□□□ -0.92
CDC42BPA-205ENST00000366769 ZNF138P52744 262 aa9.33□□□□□ -0.92
CDC42BPA-205ENST00000366769 LINC00596Q86U02 117 aa9.33□□□□□ -0.92
CDC42BPA-205ENST00000366769 A0A1B0GUT8 65 aa9.33□□□□□ -0.92
CDC42BPA-205ENST00000366769 TRACP01848 142 aa9.33□□□□□ -0.92
CDC42BPA-205ENST00000366769 LTBRP36941 435 aa9.33□□□□□ -0.92
CDC42BPA-205ENST00000366769 OCC1Q8TAD7 63 aa9.33□□□□□ -0.92
CDC42BPA-205ENST00000366769 INO80CQ6PI98 192 aaPredicted RBP9.32□□□□□ -0.92
CDC42BPA-205ENST00000366769 R3HDMLQ9H3Y0 253 aa9.32□□□□□ -0.92
CDC42BPA-205ENST00000366769 ZNF525Q8N782 197 aa9.32□□□□□ -0.92
CDC42BPA-205ENST00000366769 IGKV1D-16P01601 117 aa9.32□□□□□ -0.92
CDC42BPA-205ENST00000366769 MS4A6AQ9H2W1 248 aa9.32□□□□□ -0.92
CDC42BPA-205ENST00000366769 GATD1Q8NB37 220 aa9.32□□□□□ -0.92
CDC42BPA-205ENST00000366769 TNS1Q9HBL0 1735 aaKnown RBP9.32□□□□□ -0.92
CDC42BPA-205ENST00000366769 PCSK4Q6UW60 755 aa9.32□□□□□ -0.92
CDC42BPA-205ENST00000366769 MIR17HGQ75NE6 70 aa9.32□□□□□ -0.92
CDC42BPA-205ENST00000366769 MRPS18CQ9Y3D5 142 aaKnown RBP9.32□□□□□ -0.92
CDC42BPA-205ENST00000366769 IGHV3-64A0A075B6Q5 118 aa9.32□□□□□ -0.92
CDC42BPA-205ENST00000366769 FNDC10F2Z333 226 aa9.32□□□□□ -0.92
CDC42BPA-205ENST00000366769 KIR2DL5BA0A0G2JN68 375 aa9.32□□□□□ -0.92
CDC42BPA-205ENST00000366769 KIR2DL5BA0A0G2JPC4 375 aa9.32□□□□□ -0.92
CDC42BPA-205ENST00000366769 KIR2DL5AQ8N109 375 aa9.32□□□□□ -0.92
CDC42BPA-205ENST00000366769 JPT2Q9H910 190 aa9.31□□□□□ -0.92
CDC42BPA-205ENST00000366769 LAMTOR3Q9UHA4 124 aa9.31□□□□□ -0.92
CDC42BPA-205ENST00000366769 A0A1W2PPM0 123 aa9.31□□□□□ -0.92
CDC42BPA-205ENST00000366769 LINC00158P58513 81 aa9.31□□□□□ -0.92
CDC42BPA-205ENST00000366769 SHISA5Q8N114 240 aa9.31□□□□□ -0.92
CDC42BPA-205ENST00000366769 CHCHD1Q96BP2 118 aaKnown RBP9.31□□□□□ -0.92
CDC42BPA-205ENST00000366769 GAGE2AQ6NT46 116 aa9.31□□□□□ -0.92
CDC42BPA-205ENST00000366769 RASL11AQ6T310 242 aa9.31□□□□□ -0.92
CDC42BPA-205ENST00000366769 ZNF114Q8NC26 417 aa9.31□□□□□ -0.92
CDC42BPA-205ENST00000366769 ANKRD39Q53RE8 183 aa9.31□□□□□ -0.92
CDC42BPA-205ENST00000366769 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.31□□□□□ -0.92
CDC42BPA-205ENST00000366769 PLA2G2FQ9BZM2 168 aa9.31□□□□□ -0.92
CDC42BPA-205ENST00000366769 RPP25Q9BUL9 199 aaKnown RBP9.31□□□□□ -0.92
CDC42BPA-205ENST00000366769 NPIPB11E5RHQ5 1161 aa9.31□□□□□ -0.92
CDC42BPA-205ENST00000366769 J3KT08 172 aa9.31□□□□□ -0.92
CDC42BPA-205ENST00000366769 ASIPP42127 132 aa9.31□□□□□ -0.92
CDC42BPA-205ENST00000366769 C2orf82Q6UX34 121 aa9.31□□□□□ -0.92
CDC42BPA-205ENST00000366769 IL11P20809 199 aa9.31□□□□□ -0.92
CDC42BPA-205ENST00000366769 CALYQ9NYX4 217 aa9.31□□□□□ -0.92
CDC42BPA-205ENST00000366769 IGKCP01834 107 aa9.3□□□□□ -0.92
CDC42BPA-205ENST00000366769 LINC01551Q86U37 167 aa9.3□□□□□ -0.92
CDC42BPA-205ENST00000366769 LOC102723996A0A087X1L8 192 aa9.3□□□□□ -0.92
CDC42BPA-205ENST00000366769 BHLHA9Q7RTU4 235 aa9.3□□□□□ -0.92
CDC42BPA-205ENST00000366769 IGHV2OR16-5A0A0B4J2B6 119 aa9.3□□□□□ -0.92
CDC42BPA-205ENST00000366769 RNF182Q8N6D2 247 aa9.3□□□□□ -0.92
CDC42BPA-205ENST00000366769 PRB3Q04118 309 aaPredicted RBP9.3□□□□□ -0.92
CDC42BPA-205ENST00000366769 CLEC7AQ9BXN2 247 aa9.3□□□□□ -0.92
CDC42BPA-205ENST00000366769 ZNF625Q96I27 306 aaPredicted RBP9.3□□□□□ -0.92
CDC42BPA-205ENST00000366769 TRAV1-1A0A0B4J248 108 aa9.3□□□□□ -0.92
CDC42BPA-205ENST00000366769 NCR2O95944 276 aa9.3□□□□□ -0.92
CDC42BPA-205ENST00000366769 KCNK17Q96T54 332 aa9.3□□□□□ -0.92
CDC42BPA-205ENST00000366769 COL16A1Q07092 1604 aaPredicted RBP9.3□□□□□ -0.92
CDC42BPA-205ENST00000366769 TRAV13-1A0A0B4J241 112 aa9.29□□□□□ -0.92
CDC42BPA-205ENST00000366769 TRAV24A0A0B4J272 114 aa9.29□□□□□ -0.92
CDC42BPA-205ENST00000366769 PSCAO43653 123 aa9.29□□□□□ -0.92
CDC42BPA-205ENST00000366769 ZNF645Q8N7E2 425 aa9.29□□□□□ -0.92
CDC42BPA-205ENST00000366769 SCRT1Q9BWW7 348 aa9.29□□□□□ -0.92
CDC42BPA-205ENST00000366769 IL9P15248 144 aa9.29□□□□□ -0.92
CDC42BPA-205ENST00000366769 VN1R4Q7Z5H5 301 aa9.29□□□□□ -0.92
CDC42BPA-205ENST00000366769 TRGV4A0A0C4DH28 118 aa9.29□□□□□ -0.92
CDC42BPA-205ENST00000366769 GAGE5Q13069 117 aa9.29□□□□□ -0.92
CDC42BPA-205ENST00000366769 GAGE6Q13070 117 aa9.29□□□□□ -0.92
CDC42BPA-205ENST00000366769 PDLIM4P50479 330 aa9.29□□□□□ -0.92
CDC42BPA-205ENST00000366769 MLNRO43193 412 aa9.29□□□□□ -0.92
CDC42BPA-205ENST00000366769 SRD5A1P18405 259 aa9.29□□□□□ -0.92
CDC42BPA-205ENST00000366769 ORMDL3Q8N138 153 aa9.29□□□□□ -0.92
CDC42BPA-205ENST00000366769 C10orf35Q96D05 121 aa9.29□□□□□ -0.92
CDC42BPA-205ENST00000366769 FAM60AQ9NP50 221 aa9.29□□□□□ -0.92
CDC42BPA-205ENST00000366769 C8orf88P0DMB2 117 aa9.29□□□□□ -0.92
CDC42BPA-205ENST00000366769 TDRG1Q3Y452 100 aa9.29□□□□□ -0.92
CDC42BPA-205ENST00000366769 C1QTNF5Q9BXJ0 243 aa9.29□□□□□ -0.92
CDC42BPA-205ENST00000366769 MPV17P39210 176 aa9.29□□□□□ -0.92
CDC42BPA-205ENST00000366769 LINC00305Q7Z4B0 112 aa9.29□□□□□ -0.92
CDC42BPA-205ENST00000366769 ACANP16112 2415 aa9.29□□□□□ -0.92
CDC42BPA-205ENST00000366769 C1QL2Q7Z5L3 287 aa9.29□□□□□ -0.92
CDC42BPA-205ENST00000366769 RNF115Q9Y4L5 304 aa9.29□□□□□ -0.92
CDC42BPA-205ENST00000366769 HGFACQ04756 655 aa9.28□□□□□ -0.92
CDC42BPA-205ENST00000366769 FGFRL1Q8N441 504 aa9.28□□□□□ -0.92
CDC42BPA-205ENST00000366769 HBDP02042 147 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms